This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00920: Sulfur metabolism

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aae00920 Aquifex aeolicus SBML MML
aau00920 Arthrobacter aurescens SBML MML
aav00920 Acidovorax avenae SBML MML
aba00920 Acidobacteria bacterium SBML MML
abc00920 Acinetobacter baumannii ACICU SBML MML
abm00920 Acinetobacter baumannii SDF SBML MML
abo00920 Alcanivorax borkumensis SBML MML
abu00920 Arcobacter butzleri SBML MML
aby00920 Acinetobacter baumannii AYE SBML MML
acb00920 Acinetobacter baumannii ATCC 17978 SBML MML
ace00920 Acidothermus cellulolyticus SBML MML
aci00920 Acinetobacter sp. ADP1 SBML MML
acr00920 Acidiphilium cryptum JF-5 SBML MML
ade00920 Anaeromyxobacter dehalogenans 2CP-C SBML MML
aeh00920 Alkalilimnicola ehrlichei SBML MML
afm00920 Aspergillus fumigatus SBML MML
afu00920 Archaeoglobus fulgidus SBML MML
afw00920 Anaeromyxobacter sp. Fw109-5 SBML MML
aga00920 Anopheles gambiae (mosquito) SBML MML
ago00920 Ashbya gossypii (Eremothecium gossypii) SBML MML
aha00920 Aeromonas hydrophila SBML MML
ajs00920 Acidovorax sp. JS42 SBML MML
amr00920 Acaryochloris marina SBML MML
amt00920 Alkaliphilus metalliredigens SBML MML
ana00920 Anabaena sp. PCC7120 SBML MML
ang00920 Aspergillus niger SBML MML
ani00920 Aspergillus nidulans SBML MML
aoe00920 Alkaliphilus oremlandii SBML MML
aor00920 Aspergillus oryzae SBML MML
apa00920 Actinobacillus pleuropneumoniae AP76 (serotype 7) SBML MML
ape00920 Aeropyrum pernix SBML MML
apj00920 Actinobacillus pleuropneumoniae JL03 (serotype 3) SBML MML
apl00920 Actinobacillus pleuropneumoniae L20 (serotype 5b) SBML MML
art00920 Arthrobacter sp. FB24 SBML MML
asa00920 Aeromonas salmonicida SBML MML
asu00920 Actinobacillus succinogenes SBML MML
atc00920 Agrobacterium tumefaciens C58 (Cereon) SBML MML
ath00920 Arabidopsis thaliana (thale cress) SBML MML
atu00920 Agrobacterium tumefaciens C58 SBML MML
ava00920 Anabaena variabilis SBML MML
azc00920 Azorhizobium caulinodans SBML MML
azo00920 Azoarcus sp. BH72 SBML MML
baa00920 Bacillus anthracis A2012 SBML MML
bac00920 Burkholderia ambifaria MC40-6 SBML MML
bad00920 Bifidobacterium adolescentis SBML MML
bam00920 Burkholderia cepacia SBML MML
ban00920 Bacillus anthracis Ames SBML MML
bar00920 Bacillus anthracis Ames 0581 SBML MML
bas00920 Buchnera aphidicola Sg SBML MML
bat00920 Bacillus anthracis Sterne SBML MML
bav00920 Bordetella avium SBML MML
bay00920 Bacillus amyloliquefaciens SBML MML
bba00920 Bdellovibrio bacteriovorus SBML MML
bbr00920 Bordetella bronchiseptica SBML MML
bbt00920 Bradyrhizobium sp. BTAi1 SBML MML
bca00920 Bacillus cereus ATCC 10987 SBML MML
bce00920 Bacillus cereus ATCC 14579 SBML MML
bch00920 Burkholderia cenocepacia HI2424 SBML MML
bci00920 Baumannia cicadellinicola SBML MML
bcl00920 Bacillus clausii SBML MML
bcm00920 Burkholderia cenocepacia MC0-3 SBML MML
bcn00920 Burkholderia cenocepacia AU1054 SBML MML
bcs00920 Brucella canis SBML MML
bcy00920 Bacillus cytotoxis NVH 391-98 SBML MML
bcz00920 Bacillus cereus ZK SBML MML
bfl00920 Candidatus Blochmannia floridanus SBML MML
bfr00920 Bacteroides fragilis YCH46 SBML MML
bfs00920 Bacteroides fragilis NCTC9343 SBML MML
bha00920 Bacillus halodurans SBML MML
bid00920 Beijerinckia indica SBML MML
bja00920 Bradyrhizobium japonicum SBML MML
bld00920 Bacillus licheniformis DSM13 SBML MML
bli00920 Bacillus licheniformis ATCC 14580 SBML MML
blo00920 Bifidobacterium longum NCC2705 SBML MML
bma00920 Burkholderia mallei ATCC 23344 SBML MML
bmb00920 Brucella abortus 9-941 SBML MML
bmc00920 Brucella abortus S19 SBML MML
bme00920 Brucella melitensis 16M SBML MML
bmf00920 Brucella melitensis biovar Abortus SBML MML
bml00920 Burkholderia mallei NCTC 10229 SBML MML
bmn00920 Burkholderia mallei NCTC 10247 SBML MML
bms00920 Brucella suis 1330 SBML MML
bmt00920 Brucella suis ATCC 23445 SBML MML
bmu00920 Burkholderia multivorans ATCC 17616 (JGI) SBML MML
bmv00920 Burkholderia mallei SAVP1 SBML MML
bmy00920 Brugia malayi (filaria) SBML MML
bov00920 Brucella ovis SBML MML
bpa00920 Bordetella parapertussis SBML MML
bpd00920 Burkholderia pseudomallei 668 SBML MML
bpe00920 Bordetella pertussis SBML MML
bph00920 Burkholderia phymatum SBML MML
bpl00920 Burkholderia pseudomallei 1106a SBML MML
bpm00920 Burkholderia pseudomallei 1710b SBML MML
bpn00920 Candidatus Blochmannia pennsylvanicus SBML MML
bps00920 Burkholderia pseudomallei K96243 SBML MML
bpt00920 Bordetella petrii SBML MML
bpu00920 Bacillus pumilus SBML MML
bra00920 Bradyrhizobium sp. ORS278 SBML MML
bsu00920 Bacillus subtilis SBML MML
bta00920 Bos taurus (cow) SBML MML
bte00920 Burkholderia thailandensis SBML MML
bth00920 Bacteroides thetaiotaomicron SBML MML
btk00920 Bacillus thuringiensis 97-27 SBML MML
btl00920 Bacillus thuringiensis Al Hakam SBML MML
buc00920 Buchnera aphidicola APS SBML MML
bur00920 Burkholderia sp. 383 SBML MML
bvi00920 Burkholderia vietnamiensis SBML MML
bvu00920 Bacteroides vulgatus SBML MML
bwe00920 Bacillus weihenstephanensis SBML MML
bxe00920 Burkholderia xenovorans SBML MML
cab00920 Chlamydophila abortus SBML MML
cac00920 Clostridium acetobutylicum SBML MML
cak00920 Caulobacter sp. K31 SBML MML
cal00920 Candida albicans SBML MML
cau00920 Chloroflexus aurantiacus SBML MML
cba00920 Clostridium botulinum A ATCC 19397 SBML MML
cbb00920 Clostridium botulinum B1 Okra SBML MML
cbd00920 Coxiella burnetii Dugway 5J108-111 SBML MML
cbe00920 Clostridium beijerinckii SBML MML
cbf00920 Clostridium botulinum F Langeland SBML MML
cbh00920 Clostridium botulinum A Hall SBML MML
cbk00920 Clostridium botulinum B Eklund 17B SBML MML
cbl00920 Clostridium botulinum A3 Loch Maree SBML MML
cbo00920 Clostridium botulinum A ATCC 3502 SBML MML
cbs00920 Coxiella burnetii RSA 331 SBML MML
cbu00920 Coxiella burnetii RSA 493 SBML MML
cca00920 Chlamydophila caviae SBML MML
cch00920 Chlorobium chlorochromatii SBML MML
cco00920 Campylobacter concisus 13826 SBML MML
ccr00920 Caulobacter crescentus CB15 SBML MML
ccv00920 Campylobacter curvus SBML MML
cdf00920 Clostridium difficile SBML MML
cdi00920 Corynebacterium diphtheriae SBML MML
cef00920 Corynebacterium efficiens SBML MML
cel00920 Caenorhabditis elegans (nematode) SBML MML
cfa00920 Canis familiaris (dog) SBML MML
cfe00920 Chlamydophila felis SBML MML
cff00920 Campylobacter fetus SBML MML
cgb00920 Corynebacterium glutamicum ATCC 13032 (Bielefeld) SBML MML
cgl00920 Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) SBML MML
cgr00920 Candida glabrata SBML MML
cgt00920 Corynebacterium glutamicum R SBML MML
cha00920 Campylobacter hominis ATCC BAA-381 SBML MML
chu00920 Cytophaga hutchinsonii SBML MML
chy00920 Carboxydothermus hydrogenoformans SBML MML
cja00920 Cellvibrio japonicus SBML MML
cjd00920 Campylobacter jejuni subsp. doylei 269.97 SBML MML
cje00920 Campylobacter jejuni NCTC11168 SBML MML
cjj00920 Campylobacter jejuni 81-176 SBML MML
cjk00920 Corynebacterium jeikeium SBML MML
cjr00920 Campylobacter jejuni RM1221 SBML MML
cju00920 Campylobacter jejuni 81116 SBML MML
ckl00920 Clostridium kluyveri DSM 555 SBML MML
cko00920 Citrobacter koseri ATCC BAA-895 SBML MML
cma00920 Caldivirga maquilingensis SBML MML
cme00920 Cyanidioschyzon merolae SBML MML
cmi00920 Clavibacter michiganensis subsp. michiganensis SBML MML
cms00920 Clavibacter michiganensis subsp. sepedonicus SBML MML
cmu00920 Chlamydia muridarum SBML MML
cnb00920 Cryptococcus neoformans B-3501A SBML MML
cne00920 Cryptococcus neoformans JEC21 SBML MML
cno00920 Clostridium novyi SBML MML
cpa00920 Chlamydophila pneumoniae AR39 SBML MML
cpb00920 Chlorobium phaeobacteroides BS1 SBML MML
cpe00920 Clostridium perfringens 13 SBML MML
cpf00920 Clostridium perfringens ATCC 13124 SBML MML
cph00920 Chlorobium phaeobacteroides DSM 266 SBML MML
cpj00920 Chlamydophila pneumoniae J138 SBML MML
cpn00920 Chlamydophila pneumoniae CWL029 SBML MML
cpr00920 Clostridium perfringens SM101 SBML MML
cps00920 Colwellia psychrerythraea SBML MML
cpt00920 Chlamydophila pneumoniae TW183 SBML MML
cpy00920 Clostridium phytofermentans SBML MML
cre00920 Chlamydomonas reinhardtii SBML MML
csa00920 Chromohalobacter salexigens SBML MML
csc00920 Caldicellulosiruptor saccharolyticus SBML MML
cta00920 Chlamydia trachomatis A/HAR-13 (serovar A) SBML MML
ctb00920 Chlamydia trachomatis 434/Bu SBML MML
ctc00920 Clostridium tetani E88 SBML MML
cte00920 Chlorobaculum tepidum SBML MML
cth00920 Clostridium thermocellum SBML MML
cti00920 Cupriavidus taiwanensis SBML MML
ctl00920 Chlamydia trachomatis L2b/UCH-1/proctitis SBML MML
ctr00920 Chlamydia trachomatis D/UW-3/CX (serovar D) SBML MML
cur00920 Corynebacterium urealyticum SBML MML
cvi00920 Chromobacterium violaceum SBML MML
cya00920 Cyanobacteria Yellowstone A-Prime SBML MML
cyb00920 Cyanobacteria Yellowstone B-Prime SBML MML
cyt00920 Cyanothece sp. ATCC 51142 SBML MML
daag00920 (Undocumented) SBML MML
dac00920 Delftia acidovorans SBML MML
dame00920 (Undocumented) SBML MML
dar00920 Dechloromonas aromatica SBML MML
dau00920 Candidatus Desulforudis audaxviator SBML MML
dbmo00920 Bombyx mori (silkmoth) SBML MML
dcbr00920 (Undocumented) SBML MML
dcin00920 (Undocumented) SBML MML
dde00920 Desulfovibrio desulfuricans G20 SBML MML
ddi00920 Dictyostelium discoideum SBML MML
deb00920 Dehalococcoides sp. BAV1 SBML MML
decb00920 (Undocumented) SBML MML
deh00920 Dehalococcoides sp. CBDB1 SBML MML
det00920 Dehalococcoides ethenogenes SBML MML
dfru00920 Fugu rubripes (Japanese puffer fish) SBML MML
dge00920 Deinococcus geothermalis SBML MML
dha00920 Debaryomyces hansenii SBML MML
dkwa00920 Kluyveromyces waltii SBML MML
dme00920 Drosophila melanogaster (fruit fly) SBML MML
dol00920 Candidatus Desulfococcus oleovorans SBML MML
dola00920 Oryzias latipes (Japanese medaka) SBML MML
dota00920 Ostreococcus tauri SBML MML
dpo00920 Drosophila pseudoobscura pseudoobscura SBML MML
dpop00920 (Undocumented) SBML MML
dps00920 Desulfotalea psychrophila SBML MML
dptm00920 (Undocumented) SBML MML
dra00920 Deinococcus radiodurans SBML MML
dre00920 Danio rerio (zebrafish) SBML MML
drm00920 Desulfotomaculum reducens SBML MML
dsba00920 Saccharomyces bayanus SBML MML
dsh00920 Dinoroseobacter shibae SBML MML
dsmi00920 Saccharomyces mikatae SBML MML
dspd00920 (Undocumented) SBML MML
dsy00920 Desulfitobacterium hafniense Y51 SBML MML
dtni00920 Tetraodon nigroviridis (green spotted puffer) SBML MML
dtps00920 (Undocumented) SBML MML
dvl00920 Desulfovibrio vulgaris DP4 SBML MML
dvu00920 Desulfovibrio vulgaris Hildenborough SBML MML
dvvi00920 (Undocumented) SBML MML
eacp00920 (Undocumented) SBML MML
eath00920 Arabidopsis thaliana (thale cress) (EST) SBML MML
eba00920 Aromatoleum aromaticum EbN1 SBML MML
ebna00920 Brassica napus (rape) (EST) SBML MML
ebvl00920 Beta vulgaris (beet) (EST) SBML MML
eca00920 Erwinia carotovora SBML MML
ecan00920 Capsicum annuum (chile pepper) (EST) SBML MML
ecc00920 Escherichia coli CFT073 (UPEC) SBML MML
ecd00920 Escherichia coli K-12 DH10B SBML MML
ece00920 Escherichia coli O157 EDL933 (EHEC) SBML MML
eci00920 Escherichia coli UTI89 (UPEC) SBML MML
ecj00920 Escherichia coli K-12 W3110 SBML MML
ecl00920 Escherichia coli ATCC 8739 SBML MML
ecm00920 Escherichia coli SECEC SBML MML
eco00920 Escherichia coli K-12 MG1655 SBML MML
ecp00920 Escherichia coli 536 (UPEC) SBML MML
ecs00920 Escherichia coli O157 Sakai (EHEC) SBML MML
ecsi00920 Citrus sinensis (Valencia orange) (EST) SBML MML
ecsv00920 Ciona savignyi (EST) SBML MML
ecv00920 Escherichia coli APEC O1 SBML MML
ecw00920 Escherichia coli E24377A SBML MML
ecx00920 Escherichia coli HS SBML MML
eees00920 Euphorbia esula (leafy spurge) (EST) SBML MML
efa00920 Enterococcus faecalis SBML MML
efar00920 Festuca arundinacea (tall fescue) (EST) SBML MML
egar00920 Gossypium arboreum (tree cotton) (EST) SBML MML
eghi00920 Gossypium hirsutum (upland cotton) (EST) SBML MML
egma00920 Glycine max (soybean) (EST) SBML MML
egra00920 Gossypium raimondii (EST) SBML MML
ehan00920 Helianthus annuus (sunflower) (EST) SBML MML
ehi00920 Entamoeba histolytica SBML MML
ehvu00920 Hordeum vulgare (barley) (EST) SBML MML
eini00920 Ipomoea nil (Japanese morning glory) (EST) SBML MML
eli00920 Erythrobacter litoralis SBML MML
elja00920 Lotus japonicus (lotus) (EST) SBML MML
elpe00920 Lactuca perennis (blue lettuce) (EST) SBML MML
elsi00920 Lactuca saligna (willow-leaf lettuce) (EST) SBML MML
elst00920 Lactuca sativa (lettuce) (EST) SBML MML
elvi00920 Lactuca virosa (wild lettuce) (EST) SBML MML
emec00920 Manihot esculenta (cassava) (EST) SBML MML
emte00920 Molgula tectiformis (EST) SBML MML
emtr00920 Medicago truncatula (barrel medic) (EST) SBML MML
enbe00920 Nicotiana benthamiana (EST) SBML MML
ent00920 Enterobacter sp. 638 SBML MML
enta00920 Nicotiana tabacum (tobacco) (EST) SBML MML
eosa00920 Oryza sativa (rice) (EST) SBML MML
eosi00920 Oryza sativa indica (Indian rice) (EST) SBML MML
eosj00920 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00920 Picea glauca (white spruce) (EST) SBML MML
epop00920 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00920 (Undocumented) SBML MML
eppi00920 Pinus pinaster (maritime pine) (EST) SBML MML
eppp00920 Physcomitrella patens subsp. patens (EST) SBML MML
epps00920 Prunus persica (peach) (EST) SBML MML
epsi00920 Picea sitchensis (sitka spruce) (EST) SBML MML
epta00920 Pinus taeda (loblolly pine) (EST) SBML MML
eptp00920 Populus tremula (European aspen) (EST) SBML MML
esa00920 Enterobacter sakazakii SBML MML
esbi00920 Sorghum bicolor (sorghum) (EST) SBML MML
esi00920 Exiguobacterium sibiricum SBML MML
esja00920 Schistosoma japonicum (fluke) (EST) SBML MML
esly00920 Solanum lycopersicum (tomato) (EST) SBML MML
esof00920 Saccharum officinarum (sugarcane) (EST) SBML MML
espp00920 (Undocumented) SBML MML
espu00920 Strongylocentrotus purpuratus (purple sea urchin) (EST) SBML MML
estu00920 Solanum tuberosum (potato) (EST) SBML MML
eta00920 Erwinia tasmaniensis SBML MML
etae00920 Triticum aestivum (wheat) (EST) SBML MML
evvi00920 Vitis vinifera (wine grape) (EST) SBML MML
ezel00920 (Undocumented) SBML MML
ezma00920 Zea mays (maize) (EST) SBML MML
fal00920 Frankia alni SBML MML
fgr00920 Fusarium graminearum SBML MML
fjo00920 Flavobacterium johnsoniae SBML MML
fno00920 Fervidobacterium nodosum SBML MML
fnu00920 Fusobacterium nucleatum SBML MML
fph00920 Francisella philomiragia SBML MML
fps00920 Flavobacterium psychrophilum SBML MML
fra00920 Frankia sp. CcI3 SBML MML
fre00920 Frankia sp. EAN1pec SBML MML
ftl00920 Francisella tularensis subsp. holarctica LVS SBML MML
ftn00920 Francisella tularensis subsp. novicida U112 SBML MML
ftw00920 Francisella tularensis subsp. tularensis WY96-3418 SBML MML
gbe00920 Granulobacter bethesdensis SBML MML
gdi00920 Gluconacetobacter diazotrophicus PAl 5 (Brazil) SBML MML
gfo00920 Gramella forsetii SBML MML
gga00920 Gallus gallus (chicken) SBML MML
gka00920 Geobacillus kaustophilus SBML MML
gla00920 Giardia lamblia SBML MML
glo00920 Geobacter lovleyi SBML MML
gme00920 Geobacter metallireducens SBML MML
gox00920 Gluconobacter oxydans SBML MML
gsu00920 Geobacter sulfurreducens SBML MML
gur00920 Geobacter uraniumreducens SBML MML
gvi00920 Gloeobacter violaceus SBML MML
hac00920 Helicobacter acinonychis SBML MML
hal00920 Halobacterium sp. NRC-1 SBML MML
har00920 Herminiimonas arsenicoxydans SBML MML
hau00920 Herpetosiphon aurantiacus SBML MML
hbu00920 Hyperthermus butylicus SBML MML
hch00920 Hahella chejuensis SBML MML
hdu00920 Haemophilus ducreyi SBML MML
hha00920 Halorhodospira halophila SBML MML
hhe00920 Helicobacter hepaticus SBML MML
hin00920 Haemophilus influenzae Rd KW20 (serotype d) SBML MML
hip00920 Haemophilus influenzae PittEE SBML MML
hiq00920 Haemophilus influenzae PittGG SBML MML
hit00920 Haemophilus influenzae 86-028NP (nontypeable) SBML MML
hma00920 Haloarcula marismortui SBML MML
hmo00920 Heliobacterium modesticaldum SBML MML
hne00920 Hyphomonas neptunium SBML MML
hpa00920 Helicobacter pylori HPAG1 SBML MML
hpj00920 Helicobacter pylori J99 SBML MML
hpy00920 Helicobacter pylori 26695 SBML MML
hsa00920 Homo sapiens (human) SBML MML
hsl00920 Halobacterium salinarum R1 SBML MML
hsm00920 Haemophilus somnus 2336 SBML MML
hso00920 Haemophilus somnus 129PT SBML MML
hwa00920 Haloquadratum walsbyi SBML MML
iho00920 Ignicoccus hospitalis SBML MML
ilo00920 Idiomarina loihiensis SBML MML
jan00920 Jannaschia sp. CCS1 SBML MML
kcr00920 Candidatus Korarchaeum cryptofilum SBML MML
kla00920 Kluyveromyces lactis SBML MML
kpn00920 Klebsiella pneumoniae SBML MML
kra00920 Kineococcus radiotolerans SBML MML
krh00920 Kocuria rhizophila SBML MML
lac00920 Lactobacillus acidophilus SBML MML
lbc00920 Laccaria bicolor SBML MML
lbf00920 Leptospira biflexa serovar Patoc Patoc 1 (Ames) SBML MML
lbi00920 Leptospira biflexa serovar Patoc Patoc 1 (Paris) SBML MML
lbj00920 Leptospira borgpetersenii JB197 SBML MML
lbl00920 Leptospira borgpetersenii L550 SBML MML
lbu00920 Lactobacillus delbrueckii ATCC BAA-365 SBML MML
lca00920 Lactobacillus casei ATCC 334 SBML MML
lch00920 Leptothrix cholodnii SBML MML
lci00920 Leuconostoc citreum SBML MML
ldb00920 Lactobacillus delbrueckii ATCC 11842 SBML MML
lfe00920 Lactobacillus fermentum SBML MML
lhe00920 Lactobacillus helveticus SBML MML
lic00920 Leptospira interrogans serovar Copenhageni SBML MML
lil00920 Leptospira interrogans serovar lai SBML MML
lin00920 Listeria innocua SBML MML
lla00920 Lactococcus lactis subsp. lactis IL1403 SBML MML
llc00920 Lactococcus lactis subsp. cremoris SK11 SBML MML
llm00920 Lactococcus lactis subsp. cremoris MG1363 SBML MML
lma00920 Leishmania major SBML MML
lme00920 Leuconostoc mesenteroides SBML MML
lmf00920 Listeria monocytogenes F2365 SBML MML
lmo00920 Listeria monocytogenes EGD-e SBML MML
lpl00920 Lactobacillus plantarum WCFS1 SBML MML
lpn00920 Legionella pneumophila Philadelphia 1 SBML MML
lpp00920 Legionella pneumophila Paris SBML MML
lre00920 Lactobacillus reuteri DSM 20016 SBML MML
lsl00920 Lactobacillus salivarius SBML MML
lsp00920 Lysinibacillus sphaericus SBML MML
lwe00920 Listeria welshimeri SLCC5334 SBML MML
lxx00920 Leifsonia xyli xyli CTCB07 SBML MML
mab00920 Mycobacterium abscessus ATCC 19977T SBML MML
mac00920 Methanosarcina acetivorans SBML MML
mag00920 Magnetospirillum magneticum SBML MML
maq00920 Marinobacter aquaeolei SBML MML
mar00920 Microcystis aeruginosa SBML MML
mav00920 Mycobacterium avium 104 SBML MML
mba00920 Methanosarcina barkeri SBML MML
mbb00920 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbn00920 Candidatus Methanoregula boonei SBML MML
mbo00920 Mycobacterium bovis AF2122/97 SBML MML
mbr00920 Monosiga brevicollis SBML MML
mbu00920 Methanococcoides burtonii SBML MML
mca00920 Methylococcus capsulatus SBML MML
mcc00920 Macaca mulatta (rhesus monkey) SBML MML
mdo00920 Monodelphis domestica (opossum) SBML MML
mem00920 Methanoculleus marisnigri SBML MML
mes00920 Mesorhizobium sp. BNC1 SBML MML
met00920 Methylobacterium sp. 4-46 SBML MML
mex00920 Methylobacterium extorquens SBML MML
mfa00920 Methylobacillus flagellatus SBML MML
mgi00920 Mycobacterium gilvum SBML MML
mgl00920 Malassezia globosa SBML MML
mgm00920 Magnetococcus sp. MC-1 SBML MML
mgr00920 Magnaporthe grisea SBML MML
mhu00920 Methanospirillum hungatei SBML MML
mjl00920 Mycobacterium sp. JLS SBML MML
mkm00920 Mycobacterium sp. KMS SBML MML
mle00920 Mycobacterium leprae TN SBML MML
mlo00920 Mesorhizobium loti SBML MML
mma00920 Methanosarcina mazei SBML MML
mmc00920 Mycobacterium sp. MCS SBML MML
mmi00920 Mycobacterium marinum M SBML MML
mmr00920 Maricaulis maris SBML MML
mms00920 Minibacterium massiliensis SBML MML
mmu00920 Mus musculus (mouse) SBML MML
mmw00920 Marinomonas sp. MWYL1 SBML MML
mpa00920 Mycobacterium avium paratuberculosis SBML MML
mpt00920 Methylibium petroleiphilum SBML MML
mra00920 Mycobacterium tuberculosis H37Ra SBML MML
mrd00920 Methylobacterium radiotolerans SBML MML
mse00920 Metallosphaera sedula SBML MML
msi00920 Methanobrevibacter smithii ATCC 35061 SBML MML
msm00920 Mycobacterium smegmatis SBML MML
mst00920 Methanosphaera stadtmanae SBML MML
msu00920 Mannheimia succiniciproducens SBML MML
mta00920 Moorella thermoacetica SBML MML
mtc00920 Mycobacterium tuberculosis CDC1551 SBML MML
mtf00920 Mycobacterium tuberculosis F11 SBML MML
mtu00920 Mycobacterium tuberculosis H37Rv SBML MML
mul00920 Mycobacterium ulcerans SBML MML
mva00920 Mycobacterium vanbaalenii SBML MML
mvn00920 Methanococcus vannielii SBML MML
mxa00920 Myxococcus xanthus SBML MML
nar00920 Novosphingobium aromaticivorans SBML MML
nca00920 Nocardioides sp. JS614 SBML MML
ncr00920 Neurospora crassa SBML MML
net00920 Nitrosomonas eutropha SBML MML
neu00920 Nitrosomonas europaea SBML MML
nfa00920 Nocardia farcinica SBML MML
ngo00920 Neisseria gonorrhoeae SBML MML
nha00920 Nitrobacter hamburgensis SBML MML
nis00920 Nitratiruptor sp. SB155-2 SBML MML
nma00920 Neisseria meningitidis Z2491 (serogroup A) SBML MML
nmc00920 Neisseria meningitidis FAM18 (serogroup C) SBML MML
nme00920 Neisseria meningitidis MC58 (serogroup B) SBML MML
nmn00920 Neisseria meningitidis 053442 (serogroup C) SBML MML
nmr00920 Nitrosopumilus maritimus SBML MML
nmu00920 Nitrosospira multiformis SBML MML
noc00920 Nitrosococcus oceani SBML MML
nph00920 Natronomonas pharaonis SBML MML
npu00920 Nostoc punctiforme SBML MML
nve00920 Nematostella vectensis (sea anemone) SBML MML
nwi00920 Nitrobacter winogradskyi SBML MML
oaa00920 Ornithorhynchus anatinus (platypus) SBML MML
oan00920 Ochrobactrum anthropi SBML MML
oih00920 Oceanobacillus iheyensis SBML MML
olu00920 Ostreococcus lucimarinus SBML MML
ooe00920 Oenococcus oeni SBML MML
osa00920 Oryza sativa japonica (Japanese rice) SBML MML
ote00920 Opitutus terrae SBML MML
pab00920 Pyrococcus abyssi SBML MML
pac00920 Propionibacterium acnes SBML MML
pae00920 Pseudomonas aeruginosa PAO1 SBML MML
pai00920 Pyrobaculum aerophilum SBML MML
pan00920 Podospora anserina SBML MML
pap00920 Pseudomonas aeruginosa PA7 SBML MML
par00920 Psychrobacter arcticum SBML MML
pas00920 Pyrobaculum arsenaticum SBML MML
pat00920 Pseudoalteromonas atlantica SBML MML
pau00920 Pseudomonas aeruginosa UCBPP-PA14 SBML MML
pca00920 Pelobacter carbinolicus SBML MML
pcl00920 Pyrobaculum calidifontis SBML MML
pcr00920 Psychrobacter cryohalolentis SBML MML
pde00920 Paracoccus denitrificans SBML MML
pdi00920 Parabacteroides distasonis SBML MML
pen00920 Pseudomonas entomophila SBML MML
pfl00920 Pseudomonas fluorescens Pf-5 SBML MML
pfo00920 Pseudomonas fluorescens Pf0-1 SBML MML
pfu00920 Pyrococcus furiosus SBML MML
pha00920 Pseudoalteromonas haloplanktis SBML MML
pho00920 Pyrococcus horikoshii SBML MML
pic00920 Pichia stipitis SBML MML
pin00920 Psychromonas ingrahamii SBML MML
pis00920 Pyrobaculum islandicum SBML MML
pla00920 Parvibaculum lavamentivorans SBML MML
plt00920 Pelodictyon luteolum SBML MML
plu00920 Photorhabdus luminescens SBML MML
pma00920 Prochlorococcus marinus SS120 SBML MML
pmb00920 Prochlorococcus marinus AS9601 SBML MML
pmc00920 Prochlorococcus marinus MIT 9515 SBML MML
pme00920 Prochlorococcus marinus NATL1A SBML MML
pmf00920 Prochlorococcus marinus MIT 9303 SBML MML
pmg00920 Prochlorococcus marinus MIT 9301 SBML MML
pmh00920 Prochlorococcus marinus MIT 9215 SBML MML
pmi00920 Prochlorococcus marinus MIT9312 SBML MML
pmj00920 Prochlorococcus marinus MIT 9211 SBML MML
pmm00920 Prochlorococcus marinus MED4 SBML MML
pmn00920 Prochlorococcus marinus NATL2A SBML MML
pmo00920 Petrotoga mobilis SBML MML
pmt00920 Prochlorococcus marinus MIT9313 SBML MML
pmu00920 Pasteurella multocida SBML MML
pmy00920 Pseudomonas mendocina SBML MML
pna00920 Polaromonas naphthalenivorans SBML MML
pne00920 Polynucleobacter necessarius SBML MML
pnu00920 Polynucleobacter sp. QLW-P1DMWA-1 SBML MML
pol00920 Polaromonas sp. JS666 SBML MML
ppd00920 Pelobacter propionicus SBML MML
ppf00920 Pseudomonas putida F1 SBML MML
ppg00920 Pseudomonas putida GB-1 SBML MML
ppp00920 Physcomitrella patens subsp. patens SBML MML
ppr00920 Photobacterium profundum SBML MML
ppu00920 Pseudomonas putida KT2440 SBML MML
ppw00920 Pseudomonas putida W619 SBML MML
prw00920 Psychrobacter sp. PRwf-1 SBML MML
psa00920 Pseudomonas stutzeri SBML MML
psb00920 Pseudomonas syringae pv. syringae B728a SBML MML
psp00920 Pseudomonas syringae pv. phaseolicola 1448A SBML MML
pst00920 Pseudomonas syringae pv. tomato DC3000 SBML MML
pth00920 Pelotomaculum thermopropionicum SBML MML
pto00920 Picrophilus torridus SBML MML
ptr00920 Pan troglodytes (chimpanzee) SBML MML
pub00920 Candidatus Pelagibacter ubique SBML MML
pvi00920 Prosthecochloris vibrioformis SBML MML
rba00920 Rhodopirellula baltica SBML MML
rca00920 Roseiflexus castenholzii DSM13941 SBML MML
rci00920 Uncultured methanogenic archaeon RC-I SBML MML
rde00920 Roseobacter denitrificans SBML MML
rec00920 Rhizobium etli CIAT 652 SBML MML
reh00920 Ralstonia eutropha H16 SBML MML
ret00920 Rhizobium etli CFN 42 SBML MML
reu00920 Ralstonia eutropha JMP134 SBML MML
rfr00920 Rhodoferax ferrireducens SBML MML
rha00920 Rhodococcus sp. RHA1 SBML MML
rle00920 Rhizobium leguminosarum SBML MML
rma00920 Candidatus Ruthia magnifica SBML MML
rme00920 Ralstonia metallidurans SBML MML
rno00920 Rattus norvegicus (rat) SBML MML
rpa00920 Rhodopseudomonas palustris CGA009 SBML MML
rpb00920 Rhodopseudomonas palustris HaA2 SBML MML
rpc00920 Rhodopseudomonas palustris BisB18 SBML MML
rpd00920 Rhodopseudomonas palustris BisB5 SBML MML
rpe00920 Rhodopseudomonas palustris BisA53 SBML MML
rpt00920 Rhodopseudomonas palustris TIE-1 SBML MML
rrs00920 Roseiflexus sp. RS-1 SBML MML
rru00920 Rhodospirillum rubrum SBML MML
rsa00920 Renibacterium salmoninarum SBML MML
rsh00920 Rhodobacter sphaeroides ATCC 17029 SBML MML
rso00920 Ralstonia solanacearum SBML MML
rsp00920 Rhodobacter sphaeroides 2.4.1 SBML MML
rsq00920 Rhodobacter sphaeroides ATCC 17025 SBML MML
rxy00920 Rubrobacter xylanophilus SBML MML
saa00920 Staphylococcus aureus USA300 SBML MML
sab00920 Staphylococcus aureus RF122 SBML MML
sac00920 Staphylococcus aureus COL SBML MML
sae00920 Staphylococcus aureus Newman SBML MML
sag00920 Streptococcus agalactiae 2603 (serotype V) SBML MML
sah00920 Staphylococcus aureus JH1 SBML MML
sai00920 Sulfolobus acidocaldarius SBML MML
saj00920 Staphylococcus aureus JH9 SBML MML
sak00920 Streptococcus agalactiae A909 (serotype Ia) SBML MML
sal00920 Sphingopyxis alaskensis SBML MML
sam00920 Staphylococcus aureus MW2 SBML MML
san00920 Streptococcus agalactiae NEM316 (serotype III) SBML MML
sao00920 Staphylococcus aureus NCTC8325 SBML MML
saq00920 Salinispora arenicola SBML MML
sar00920 Staphylococcus aureus MRSA252 SBML MML
sas00920 Staphylococcus aureus MSSA476 SBML MML
sat00920 Syntrophus aciditrophicus SBML MML
sau00920 Staphylococcus aureus N315 SBML MML
sav00920 Staphylococcus aureus Mu50 SBML MML
saw00920 Staphylococcus aureus Mu3 SBML MML
sax00920 Staphylococcus aureus USA300 TCH1516 SBML MML
saz00920 Shewanella amazonensis SBML MML
sbc00920 Shigella boydii CDC 3083-94 SBML MML
sbl00920 Shewanella baltica OS155 SBML MML
sbm00920 Shewanella baltica OS185 SBML MML
sbn00920 Shewanella baltica OS195 SBML MML
sbo00920 Shigella boydii Sb227 SBML MML
sce00920 Saccharomyces cerevisiae SBML MML
scl00920 Sorangium cellulosum SBML MML
sco00920 Streptomyces coelicolor SBML MML
sde00920 Saccharophagus degradans SBML MML
sdn00920 Shewanella denitrificans SBML MML
sdy00920 Shigella dysenteriae SBML MML
sec00920 Salmonella enterica subsp. enterica serovar Choleraesuis SBML MML
sen00920 Saccharopolyspora erythraea SBML MML
sep00920 Staphylococcus epidermidis ATCC 12228 SBML MML
ser00920 Staphylococcus epidermidis RP62A SBML MML
ses00920 Salmonella enterica subsp. arizonae SBML MML
sfl00920 Shigella flexneri 301 (serotype 2a) SBML MML
sfr00920 Shewanella frigidimarina SBML MML
sfu00920 Syntrophobacter fumaroxidans SBML MML
sfv00920 Shigella flexneri 8401 (serotype 5b) SBML MML
sfx00920 Shigella flexneri 2457T (serotype 2a) SBML MML
sgl00920 Sodalis glossinidius SBML MML
sgo00920 Streptococcus gordonii SBML MML
sgr00920 Streptomyces griseus SBML MML
sha00920 Staphylococcus haemolyticus SBML MML
she00920 Shewanella sp. MR-4 SBML MML
shl00920 Shewanella halifaxensis SBML MML
shm00920 Shewanella sp. MR-7 SBML MML
shn00920 Shewanella sp. ANA-3 SBML MML
shw00920 Shewanella sp. W3-18-1 SBML MML
sil00920 Ruegeria pomeroyi SBML MML
sit00920 Silicibacter sp. TM1040 SBML MML
slo00920 Shewanella loihica SBML MML
sma00920 Streptomyces avermitilis SBML MML
smd00920 Sinorhizobium medicae SBML MML
sme00920 Sinorhizobium meliloti SBML MML
sml00920 Stenotrophomonas maltophilia SBML MML
smr00920 Staphylothermus marinus SBML MML
smu00920 Streptococcus mutans SBML MML
son00920 Shewanella oneidensis SBML MML
spa00920 Streptococcus pyogenes MGAS10394 (serotype M6) SBML MML
spb00920 Streptococcus pyogenes MGAS6180 (serotype M28) SBML MML
spc00920 Shewanella putrefaciens SBML MML
spd00920 Streptococcus pneumoniae D39 SBML MML
spe00920 Serratia proteamaculans SBML MML
spf00920 Streptococcus pyogenes Manfredo (serotype M5) SBML MML
spg00920 Streptococcus pyogenes MGAS315 (serotype M3) SBML MML
sph00920 Streptococcus pyogenes MGAS10270 (serotype M2) SBML MML
spi00920 Streptococcus pyogenes MGAS10750 (serotype M4) SBML MML
spj00920 Streptococcus pyogenes MGAS2096 (serotype M12) SBML MML
spk00920 Streptococcus pyogenes MGAS9429 (serotype M12) SBML MML
spl00920 Shewanella pealeana SBML MML
spm00920 Streptococcus pyogenes MGAS8232 (serotype M18) SBML MML
spn00920 Streptococcus pneumoniae TIGR4 SBML MML
spo00920 Schizosaccharomyces pombe SBML MML
spq00920 Salmonella enterica subsp. enterica serovar Paratyphi B SBML MML
spr00920 Streptococcus pneumoniae R6 SBML MML
sps00920 Streptococcus pyogenes SSI-1 (serotype M3) SBML MML
spt00920 Salmonella enterica subsp. enterica serovar Paratyphi A SBML MML
spu00920 Strongylocentrotus purpuratus (purple sea urchin) SBML MML
spv00920 Streptococcus pneumoniae Hungary19A 6 SBML MML
spw00920 Streptococcus pneumoniae CGSP14 (serotype 14) SBML MML
spy00920 Streptococcus pyogenes SF370 (serotype M1) SBML MML
spz00920 Streptococcus pyogenes MGAS5005 (serotype M1) SBML MML
sru00920 Salinibacter ruber SBML MML
ssa00920 Streptococcus sanguinis SBML MML
ssc00920 Sus scrofa (pig) SBML MML
sse00920 Shewanella sediminis SBML MML
ssn00920 Shigella sonnei SBML MML
sso00920 Sulfolobus solfataricus SBML MML
ssp00920 Staphylococcus saprophyticus SBML MML
ssu00920 Streptococcus suis 05ZYH33 SBML MML
ssv00920 Streptococcus suis 98HAH33 SBML MML
stc00920 Streptococcus thermophilus CNRZ1066 SBML MML
ste00920 Streptococcus thermophilus LMD-9 SBML MML
sth00920 Symbiobacterium thermophilum SBML MML
stl00920 Streptococcus thermophilus LMG18311 SBML MML
stm00920 Salmonella typhimurium LT2 SBML MML
sto00920 Sulfolobus tokodaii SBML MML
stp00920 Salinispora tropica SBML MML
stt00920 Salmonella enterica subsp. enterica serovar Typhi Ty2 SBML MML
sty00920 Salmonella enterica subsp. enterica serovar Typhi CT18 SBML MML
sun00920 Sulfurovum sp. NBC37-1 SBML MML
sus00920 Solibacter usitatus SBML MML
swd00920 Shewanella woodyi ATCC 51908 SBML MML
swi00920 Sphingomonas wittichii SBML MML
swo00920 Syntrophomonas wolfei SBML MML
syc00920 Synechococcus elongatus PCC6301 SBML MML
syd00920 Synechococcus sp. CC9605 SBML MML
sye00920 Synechococcus sp. CC9902 SBML MML
syf00920 Synechococcus elongatus PCC7942 SBML MML
syg00920 Synechococcus sp. CC9311 SBML MML
syn00920 Synechocystis sp. PCC6803 SBML MML
syp00920 Synechococcus sp. PCC7002 SBML MML
syr00920 Synechococcus sp. RCC307 SBML MML
syw00920 Synechococcus sp. WH8102 SBML MML
syx00920 Synechococcus sp. WH7803 SBML MML
tac00920 Thermoplasma acidophilum SBML MML
tbd00920 Thiobacillus denitrificans SBML MML
tca00920 Tribolium castaneum (red flour beetle) SBML MML
tcr00920 Trypanosoma cruzi SBML MML
tcx00920 Thiomicrospira crunogena SBML MML
tdn00920 Thiomicrospira denitrificans SBML MML
tel00920 Thermosynechococcus elongatus SBML MML
ter00920 Trichodesmium erythraeum SBML MML
tet00920 Tetrahymena thermophila SBML MML
tex00920 Thermoanaerobacter sp. X514 SBML MML
tfu00920 Thermobifida fusca SBML MML
tko00920 Thermococcus kodakaraensis SBML MML
tle00920 Thermotoga lettingae SBML MML
tma00920 Thermotoga maritima SBML MML
tme00920 Thermosipho melanesiensis SBML MML
tne00920 Thermoproteus neutrophilus SBML MML
tpd00920 Thermoanaerobacter pseudethanolicus SBML MML
tpe00920 Thermofilum pendens SBML MML
tpt00920 Thermotoga petrophila SBML MML
trq00920 Thermotoga sp. RQ2 SBML MML
tte00920 Thermoanaerobacter tengcongensis SBML MML
tth00920 Thermus thermophilus HB27 SBML MML
ttj00920 Thermus thermophilus HB8 SBML MML
tva00920 Trichomonas vaginalis SBML MML
tvo00920 Thermoplasma volcanium SBML MML
uma00920 Ustilago maydis SBML MML
vch00920 Vibrio cholerae O1 SBML MML
vco00920 Vibrio cholerae O395 SBML MML
vei00920 Verminephrobacter eiseniae SBML MML
vfi00920 Vibrio fischeri SBML MML
vha00920 Vibrio harveyi SBML MML
vok00920 Candidatus Vesicomyosocius okutanii SBML MML
vpa00920 Vibrio parahaemolyticus SBML MML
vpo00920 Vanderwaltozyma polyspora SBML MML
vvu00920 Vibrio vulnificus CMCP6 SBML MML
vvy00920 Vibrio vulnificus YJ016 SBML MML
wsu00920 Wolinella succinogenes SBML MML
xac00920 Xanthomonas axonopodis SBML MML
xau00920 Xanthobacter autotrophicus SBML MML
xcb00920 Xanthomonas campestris pv. campestris 8004 SBML MML
xcc00920 Xanthomonas campestris pv. campestris ATCC 33913 SBML MML
xcv00920 Xanthomonas campestris pv. vesicatoria SBML MML
xfa00920 Xylella fastidiosa 9a5c SBML MML
xfm00920 Xylella fastidiosa M12 SBML MML
xfn00920 Xylella fastidiosa M23 SBML MML
xft00920 Xylella fastidiosa Temecula1 SBML MML
xla00920 Xenopus laevis (African clawed frog) SBML MML
xom00920 Xanthomonas oryzae MAFF311018 SBML MML
xoo00920 Xanthomonas oryzae KACC10331 SBML MML
xtr00920 Xenopus tropicalis (western clawed frog) SBML MML
yen00920 Yersinia enterocolitica SBML MML
yli00920 Yarrowia lipolytica SBML MML
ypa00920 Yersinia pestis Antiqua SBML MML
ype00920 Yersinia pestis CO92 SBML MML
ypg00920 Yersinia pestis Angola SBML MML
ypi00920 Yersinia pseudotuberculosis IP31758 SBML MML
ypk00920 Yersinia pestis KIM SBML MML
ypm00920 Yersinia pestis Mediaevails SBML MML
ypn00920 Yersinia pestis Nepal516 SBML MML
ypp00920 Yersinia pestis Pestoides SBML MML
yps00920 Yersinia pseudotuberculosis IP32953 SBML MML
ypy00920 Yersinia pseudotuberculosis YPIII SBML MML
zmo00920 Zymomonas mobilis SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.