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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00791: Atrazine degradation

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aau00791 Arthrobacter aurescens SBML MML
aav00791 Acidovorax avenae SBML MML
abc00791 Acinetobacter baumannii ACICU SBML MML
abm00791 Acinetobacter baumannii SDF SBML MML
abo00791 Alcanivorax borkumensis SBML MML
abu00791 Arcobacter butzleri SBML MML
aby00791 Acinetobacter baumannii AYE SBML MML
acb00791 Acinetobacter baumannii ATCC 17978 SBML MML
ace00791 Acidothermus cellulolyticus SBML MML
aci00791 Acinetobacter sp. ADP1 SBML MML
acr00791 Acidiphilium cryptum JF-5 SBML MML
ade00791 Anaeromyxobacter dehalogenans 2CP-C SBML MML
aeh00791 Alkalilimnicola ehrlichei SBML MML
afm00791 Aspergillus fumigatus SBML MML
afw00791 Anaeromyxobacter sp. Fw109-5 SBML MML
aha00791 Aeromonas hydrophila SBML MML
ang00791 Aspergillus niger SBML MML
apa00791 Actinobacillus pleuropneumoniae AP76 (serotype 7) SBML MML
apj00791 Actinobacillus pleuropneumoniae JL03 (serotype 3) SBML MML
art00791 Arthrobacter sp. FB24 SBML MML
asa00791 Aeromonas salmonicida SBML MML
asu00791 Actinobacillus succinogenes SBML MML
ava00791 Anabaena variabilis SBML MML
azc00791 Azorhizobium caulinodans SBML MML
azo00791 Azoarcus sp. BH72 SBML MML
bac00791 Burkholderia ambifaria MC40-6 SBML MML
bam00791 Burkholderia cepacia SBML MML
bbt00791 Bradyrhizobium sp. BTAi1 SBML MML
bch00791 Burkholderia cenocepacia HI2424 SBML MML
bcm00791 Burkholderia cenocepacia MC0-3 SBML MML
bcn00791 Burkholderia cenocepacia AU1054 SBML MML
bcs00791 Brucella canis SBML MML
bid00791 Beijerinckia indica SBML MML
bja00791 Bradyrhizobium japonicum SBML MML
bma00791 Burkholderia mallei ATCC 23344 SBML MML
bmc00791 Brucella abortus S19 SBML MML
bme00791 Brucella melitensis 16M SBML MML
bml00791 Burkholderia mallei NCTC 10229 SBML MML
bmn00791 Burkholderia mallei NCTC 10247 SBML MML
bmt00791 Brucella suis ATCC 23445 SBML MML
bmu00791 Burkholderia multivorans ATCC 17616 (JGI) SBML MML
bmv00791 Burkholderia mallei SAVP1 SBML MML
bov00791 Brucella ovis SBML MML
bpd00791 Burkholderia pseudomallei 668 SBML MML
bph00791 Burkholderia phymatum SBML MML
bpl00791 Burkholderia pseudomallei 1106a SBML MML
bpm00791 Burkholderia pseudomallei 1710b SBML MML
bps00791 Burkholderia pseudomallei K96243 SBML MML
bra00791 Bradyrhizobium sp. ORS278 SBML MML
bte00791 Burkholderia thailandensis SBML MML
bur00791 Burkholderia sp. 383 SBML MML
bvi00791 Burkholderia vietnamiensis SBML MML
bxe00791 Burkholderia xenovorans SBML MML
cak00791 Caulobacter sp. K31 SBML MML
cbd00791 Coxiella burnetii Dugway 5J108-111 SBML MML
cbs00791 Coxiella burnetii RSA 331 SBML MML
cel00791 Caenorhabditis elegans (nematode) SBML MML
cfa00791 Canis familiaris (dog) SBML MML
cja00791 Cellvibrio japonicus SBML MML
cko00791 Citrobacter koseri ATCC BAA-895 SBML MML
cmi00791 Clavibacter michiganensis subsp. michiganensis SBML MML
cms00791 Clavibacter michiganensis subsp. sepedonicus SBML MML
cnb00791 Cryptococcus neoformans B-3501A SBML MML
cph00791 Chlorobium phaeobacteroides DSM 266 SBML MML
cpy00791 Clostridium phytofermentans SBML MML
cta00791 Chlamydia trachomatis A/HAR-13 (serovar A) SBML MML
ctb00791 Chlamydia trachomatis 434/Bu SBML MML
cth00791 Clostridium thermocellum SBML MML
cti00791 Cupriavidus taiwanensis SBML MML
ctl00791 Chlamydia trachomatis L2b/UCH-1/proctitis SBML MML
cur00791 Corynebacterium urealyticum SBML MML
cvi00791 Chromobacterium violaceum SBML MML
dac00791 Delftia acidovorans SBML MML
dame00791 (Undocumented) SBML MML
dar00791 Dechloromonas aromatica SBML MML
dbmo00791 Bombyx mori (silkmoth) SBML MML
dcbr00791 (Undocumented) SBML MML
dcin00791 (Undocumented) SBML MML
dde00791 Desulfovibrio desulfuricans G20 SBML MML
decb00791 (Undocumented) SBML MML
dfru00791 Fugu rubripes (Japanese puffer fish) SBML MML
dno00791 Dichelobacter nodosus SBML MML
dol00791 Candidatus Desulfococcus oleovorans SBML MML
dola00791 Oryzias latipes (Japanese medaka) SBML MML
dota00791 Ostreococcus tauri SBML MML
dpkn00791 (Undocumented) SBML MML
dptm00791 (Undocumented) SBML MML
dre00791 Danio rerio (zebrafish) SBML MML
dsba00791 Saccharomyces bayanus SBML MML
dsh00791 Dinoroseobacter shibae SBML MML
dtps00791 (Undocumented) SBML MML
ebvl00791 Beta vulgaris (beet) (EST) SBML MML
ecan00791 Capsicum annuum (chile pepper) (EST) SBML MML
ecc00791 Escherichia coli CFT073 (UPEC) SBML MML
ecd00791 Escherichia coli K-12 DH10B SBML MML
ece00791 Escherichia coli O157 EDL933 (EHEC) SBML MML
eci00791 Escherichia coli UTI89 (UPEC) SBML MML
ecj00791 Escherichia coli K-12 W3110 SBML MML
ecl00791 Escherichia coli ATCC 8739 SBML MML
ecm00791 Escherichia coli SECEC SBML MML
eco00791 Escherichia coli K-12 MG1655 SBML MML
ecp00791 Escherichia coli 536 (UPEC) SBML MML
ecs00791 Escherichia coli O157 Sakai (EHEC) SBML MML
ecsi00791 Citrus sinensis (Valencia orange) (EST) SBML MML
ecv00791 Escherichia coli APEC O1 SBML MML
ecw00791 Escherichia coli E24377A SBML MML
ecx00791 Escherichia coli HS SBML MML
eees00791 Euphorbia esula (leafy spurge) (EST) SBML MML
efar00791 Festuca arundinacea (tall fescue) (EST) SBML MML
egar00791 Gossypium arboreum (tree cotton) (EST) SBML MML
eghi00791 Gossypium hirsutum (upland cotton) (EST) SBML MML
egma00791 Glycine max (soybean) (EST) SBML MML
egra00791 Gossypium raimondii (EST) SBML MML
ehvu00791 Hordeum vulgare (barley) (EST) SBML MML
eini00791 Ipomoea nil (Japanese morning glory) (EST) SBML MML
elja00791 Lotus japonicus (lotus) (EST) SBML MML
elvi00791 Lactuca virosa (wild lettuce) (EST) SBML MML
emte00791 Molgula tectiformis (EST) SBML MML
emtr00791 Medicago truncatula (barrel medic) (EST) SBML MML
ent00791 Enterobacter sp. 638 SBML MML
enta00791 Nicotiana tabacum (tobacco) (EST) SBML MML
eosa00791 Oryza sativa (rice) (EST) SBML MML
eosi00791 Oryza sativa indica (Indian rice) (EST) SBML MML
eosj00791 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00791 Picea glauca (white spruce) (EST) SBML MML
epop00791 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00791 (Undocumented) SBML MML
eppi00791 Pinus pinaster (maritime pine) (EST) SBML MML
eppp00791 Physcomitrella patens subsp. patens (EST) SBML MML
epps00791 Prunus persica (peach) (EST) SBML MML
epta00791 Pinus taeda (loblolly pine) (EST) SBML MML
eru00791 Ehrlichia ruminantium Welgevonden (South Africa) SBML MML
erw00791 Ehrlichia ruminantium Welgevonden (France) SBML MML
esa00791 Enterobacter sakazakii SBML MML
esbi00791 Sorghum bicolor (sorghum) (EST) SBML MML
esly00791 Solanum lycopersicum (tomato) (EST) SBML MML
esof00791 Saccharum officinarum (sugarcane) (EST) SBML MML
espu00791 Strongylocentrotus purpuratus (purple sea urchin) (EST) SBML MML
estu00791 Solanum tuberosum (potato) (EST) SBML MML
eta00791 Erwinia tasmaniensis SBML MML
etae00791 Triticum aestivum (wheat) (EST) SBML MML
evvi00791 Vitis vinifera (wine grape) (EST) SBML MML
ezma00791 Zea mays (maize) (EST) SBML MML
fgr00791 Fusarium graminearum SBML MML
fph00791 Francisella philomiragia SBML MML
fra00791 Frankia sp. CcI3 SBML MML
fre00791 Frankia sp. EAN1pec SBML MML
fta00791 Francisella tularensis subsp. holarctica FTNF002-00 SBML MML
ftm00791 Francisella tularensis subsp. mediasiatica FSC147 SBML MML
ftw00791 Francisella tularensis subsp. tularensis WY96-3418 SBML MML
gbe00791 Granulobacter bethesdensis SBML MML
gdi00791 Gluconacetobacter diazotrophicus PAl 5 (Brazil) SBML MML
gfo00791 Gramella forsetii SBML MML
gga00791 Gallus gallus (chicken) SBML MML
gla00791 Giardia lamblia SBML MML
glo00791 Geobacter lovleyi SBML MML
gme00791 Geobacter metallireducens SBML MML
hac00791 Helicobacter acinonychis SBML MML
hal00791 Halobacterium sp. NRC-1 SBML MML
hau00791 Herpetosiphon aurantiacus SBML MML
hch00791 Hahella chejuensis SBML MML
hhe00791 Helicobacter hepaticus SBML MML
hip00791 Haemophilus influenzae PittEE SBML MML
hiq00791 Haemophilus influenzae PittGG SBML MML
hpa00791 Helicobacter pylori HPAG1 SBML MML
hpj00791 Helicobacter pylori J99 SBML MML
hpy00791 Helicobacter pylori 26695 SBML MML
hsa00791 Homo sapiens (human) SBML MML
hsl00791 Halobacterium salinarum R1 SBML MML
hsm00791 Haemophilus somnus 2336 SBML MML
hso00791 Haemophilus somnus 129PT SBML MML
hwa00791 Haloquadratum walsbyi SBML MML
jan00791 Jannaschia sp. CCS1 SBML MML
kpn00791 Klebsiella pneumoniae SBML MML
kra00791 Kineococcus radiotolerans SBML MML
lbc00791 Laccaria bicolor SBML MML
lch00791 Leptothrix cholodnii SBML MML
lma00791 Leishmania major SBML MML
lpc00791 Legionella pneumophila Corby SBML MML
mab00791 Mycobacterium abscessus ATCC 19977T SBML MML
mav00791 Mycobacterium avium 104 SBML MML
mbb00791 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbo00791 Mycobacterium bovis AF2122/97 SBML MML
mcc00791 Macaca mulatta (rhesus monkey) SBML MML
mdo00791 Monodelphis domestica (opossum) SBML MML
met00791 Methylobacterium sp. 4-46 SBML MML
mex00791 Methylobacterium extorquens SBML MML
mfa00791 Methylobacillus flagellatus SBML MML
mgl00791 Malassezia globosa SBML MML
mgr00791 Magnaporthe grisea SBML MML
mjl00791 Mycobacterium sp. JLS SBML MML
mkm00791 Mycobacterium sp. KMS SBML MML
mmc00791 Mycobacterium sp. MCS SBML MML
mmi00791 Mycobacterium marinum M SBML MML
mms00791 Minibacterium massiliensis SBML MML
mmu00791 Mus musculus (mouse) SBML MML
mmw00791 Marinomonas sp. MWYL1 SBML MML
mpt00791 Methylibium petroleiphilum SBML MML
mrd00791 Methylobacterium radiotolerans SBML MML
msm00791 Mycobacterium smegmatis SBML MML
mta00791 Moorella thermoacetica SBML MML
mtf00791 Mycobacterium tuberculosis F11 SBML MML
mtu00791 Mycobacterium tuberculosis H37Rv SBML MML
mul00791 Mycobacterium ulcerans SBML MML
nca00791 Nocardioides sp. JS614 SBML MML
ncr00791 Neurospora crassa SBML MML
net00791 Nitrosomonas eutropha SBML MML
nfa00791 Nocardia farcinica SBML MML
npu00791 Nostoc punctiforme SBML MML
oaa00791 Ornithorhynchus anatinus (platypus) SBML MML
oan00791 Ochrobactrum anthropi SBML MML
olu00791 Ostreococcus lucimarinus SBML MML
ote00791 Opitutus terrae SBML MML
ots00791 Orientia tsutsugamushi Boryong SBML MML
ott00791 Orientia tsutsugamushi Ikeda SBML MML
pae00791 Pseudomonas aeruginosa PAO1 SBML MML
pan00791 Podospora anserina SBML MML
pap00791 Pseudomonas aeruginosa PA7 SBML MML
par00791 Psychrobacter arcticum SBML MML
pat00791 Pseudoalteromonas atlantica SBML MML
pau00791 Pseudomonas aeruginosa UCBPP-PA14 SBML MML
pcr00791 Psychrobacter cryohalolentis SBML MML
pde00791 Paracoccus denitrificans SBML MML
pen00791 Pseudomonas entomophila SBML MML
pfa00791 Plasmodium falciparum 3D7 SBML MML
pfl00791 Pseudomonas fluorescens Pf-5 SBML MML
pfo00791 Pseudomonas fluorescens Pf0-1 SBML MML
pgn00791 Porphyromonas gingivalis ATCC 33277 SBML MML
pha00791 Pseudoalteromonas haloplanktis SBML MML
pin00791 Psychromonas ingrahamii SBML MML
pla00791 Parvibaculum lavamentivorans SBML MML
pmo00791 Petrotoga mobilis SBML MML
pmy00791 Pseudomonas mendocina SBML MML
pna00791 Polaromonas naphthalenivorans SBML MML
ppf00791 Pseudomonas putida F1 SBML MML
ppg00791 Pseudomonas putida GB-1 SBML MML
ppr00791 Photobacterium profundum SBML MML
ppu00791 Pseudomonas putida KT2440 SBML MML
ppw00791 Pseudomonas putida W619 SBML MML
prw00791 Psychrobacter sp. PRwf-1 SBML MML
psa00791 Pseudomonas stutzeri SBML MML
psb00791 Pseudomonas syringae pv. syringae B728a SBML MML
psp00791 Pseudomonas syringae pv. phaseolicola 1448A SBML MML
ptr00791 Pan troglodytes (chimpanzee) SBML MML
rak00791 Rickettsia akari SBML MML
rba00791 Rhodopirellula baltica SBML MML
rbo00791 Rickettsia bellii OSU 85-389 SBML MML
rcm00791 Rickettsia canadensis SBML MML
rde00791 Roseobacter denitrificans SBML MML
reh00791 Ralstonia eutropha H16 SBML MML
ret00791 Rhizobium etli CFN 42 SBML MML
reu00791 Ralstonia eutropha JMP134 SBML MML
rfr00791 Rhodoferax ferrireducens SBML MML
rha00791 Rhodococcus sp. RHA1 SBML MML
rle00791 Rhizobium leguminosarum SBML MML
rme00791 Ralstonia metallidurans SBML MML
rms00791 Rickettsia massiliae SBML MML
rno00791 Rattus norvegicus (rat) SBML MML
rpe00791 Rhodopseudomonas palustris BisA53 SBML MML
rpt00791 Rhodopseudomonas palustris TIE-1 SBML MML
rri00791 Rickettsia rickettsii Sheila Smith SBML MML
rrj00791 Rickettsia rickettsii Iowa SBML MML
rsa00791 Renibacterium salmoninarum SBML MML
rso00791 Ralstonia solanacearum SBML MML
rsp00791 Rhodobacter sphaeroides 2.4.1 SBML MML
rsq00791 Rhodobacter sphaeroides ATCC 17025 SBML MML
rxy00791 Rubrobacter xylanophilus SBML MML
saq00791 Salinispora arenicola SBML MML
sat00791 Syntrophus aciditrophicus SBML MML
saz00791 Shewanella amazonensis SBML MML
sbm00791 Shewanella baltica OS185 SBML MML
sbn00791 Shewanella baltica OS195 SBML MML
sbo00791 Shigella boydii Sb227 SBML MML
scl00791 Sorangium cellulosum SBML MML
sco00791 Streptomyces coelicolor SBML MML
sdy00791 Shigella dysenteriae SBML MML
sec00791 Salmonella enterica subsp. enterica serovar Choleraesuis SBML MML
sen00791 Saccharopolyspora erythraea SBML MML
ses00791 Salmonella enterica subsp. arizonae SBML MML
sfl00791 Shigella flexneri 301 (serotype 2a) SBML MML
sfv00791 Shigella flexneri 8401 (serotype 5b) SBML MML
sfx00791 Shigella flexneri 2457T (serotype 2a) SBML MML
sgl00791 Sodalis glossinidius SBML MML
sgr00791 Streptomyces griseus SBML MML
shl00791 Shewanella halifaxensis SBML MML
shn00791 Shewanella sp. ANA-3 SBML MML
sil00791 Ruegeria pomeroyi SBML MML
sit00791 Silicibacter sp. TM1040 SBML MML
sma00791 Streptomyces avermitilis SBML MML
sme00791 Sinorhizobium meliloti SBML MML
sml00791 Stenotrophomonas maltophilia SBML MML
spa00791 Streptococcus pyogenes MGAS10394 (serotype M6) SBML MML
spb00791 Streptococcus pyogenes MGAS6180 (serotype M28) SBML MML
spc00791 Shewanella putrefaciens SBML MML
spe00791 Serratia proteamaculans SBML MML
spf00791 Streptococcus pyogenes Manfredo (serotype M5) SBML MML
spg00791 Streptococcus pyogenes MGAS315 (serotype M3) SBML MML
sph00791 Streptococcus pyogenes MGAS10270 (serotype M2) SBML MML
spi00791 Streptococcus pyogenes MGAS10750 (serotype M4) SBML MML
spj00791 Streptococcus pyogenes MGAS2096 (serotype M12) SBML MML
spk00791 Streptococcus pyogenes MGAS9429 (serotype M12) SBML MML
spl00791 Shewanella pealeana SBML MML
spm00791 Streptococcus pyogenes MGAS8232 (serotype M18) SBML MML
sps00791 Streptococcus pyogenes SSI-1 (serotype M3) SBML MML
spt00791 Salmonella enterica subsp. enterica serovar Paratyphi A SBML MML
spv00791 Streptococcus pneumoniae Hungary19A 6 SBML MML
spz00791 Streptococcus pyogenes MGAS5005 (serotype M1) SBML MML
sse00791 Shewanella sediminis SBML MML
ssn00791 Shigella sonnei SBML MML
stm00791 Salmonella typhimurium LT2 SBML MML
stp00791 Salinispora tropica SBML MML
stt00791 Salmonella enterica subsp. enterica serovar Typhi Ty2 SBML MML
sty00791 Salmonella enterica subsp. enterica serovar Typhi CT18 SBML MML
sul00791 Sulfurihydrogenibium sp. YO3AOP1 SBML MML
sus00791 Solibacter usitatus SBML MML
swd00791 Shewanella woodyi ATCC 51908 SBML MML
swi00791 Sphingomonas wittichii SBML MML
syd00791 Synechococcus sp. CC9605 SBML MML
syf00791 Synechococcus elongatus PCC7942 SBML MML
syr00791 Synechococcus sp. RCC307 SBML MML
syx00791 Synechococcus sp. WH7803 SBML MML
tan00791 Theileria annulata SBML MML
tbr00791 Trypanosoma brucei SBML MML
tcr00791 Trypanosoma cruzi SBML MML
tme00791 Thermosipho melanesiensis SBML MML
vei00791 Verminephrobacter eiseniae SBML MML
vfi00791 Vibrio fischeri SBML MML
vha00791 Vibrio harveyi SBML MML
vok00791 Candidatus Vesicomyosocius okutanii SBML MML
wpi00791 Wolbachia pipientis SBML MML
xau00791 Xanthobacter autotrophicus SBML MML
xfm00791 Xylella fastidiosa M12 SBML MML
xfn00791 Xylella fastidiosa M23 SBML MML
xla00791 Xenopus laevis (African clawed frog) SBML MML
xtr00791 Xenopus tropicalis (western clawed frog) SBML MML
ypg00791 Yersinia pestis Angola SBML MML
ypi00791 Yersinia pseudotuberculosis IP31758 SBML MML
ypp00791 Yersinia pestis Pestoides SBML MML
ypy00791 Yersinia pseudotuberculosis YPIII SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.