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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00627: 1,4-Dichlorobenzene degradation

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aae00627 Aquifex aeolicus SBML MML
aau00627 Arthrobacter aurescens SBML MML
aav00627 Acidovorax avenae SBML MML
aba00627 Acidobacteria bacterium SBML MML
abc00627 Acinetobacter baumannii ACICU SBML MML
abm00627 Acinetobacter baumannii SDF SBML MML
abo00627 Alcanivorax borkumensis SBML MML
aby00627 Acinetobacter baumannii AYE SBML MML
acb00627 Acinetobacter baumannii ATCC 17978 SBML MML
ace00627 Acidothermus cellulolyticus SBML MML
aci00627 Acinetobacter sp. ADP1 SBML MML
acr00627 Acidiphilium cryptum JF-5 SBML MML
afm00627 Aspergillus fumigatus SBML MML
afw00627 Anaeromyxobacter sp. Fw109-5 SBML MML
ago00627 Ashbya gossypii (Eremothecium gossypii) SBML MML
ajs00627 Acidovorax sp. JS42 SBML MML
amr00627 Acaryochloris marina SBML MML
ana00627 Anabaena sp. PCC7120 SBML MML
ang00627 Aspergillus niger SBML MML
ani00627 Aspergillus nidulans SBML MML
aor00627 Aspergillus oryzae SBML MML
art00627 Arthrobacter sp. FB24 SBML MML
atc00627 Agrobacterium tumefaciens C58 (Cereon) SBML MML
ath00627 Arabidopsis thaliana (thale cress) SBML MML
atu00627 Agrobacterium tumefaciens C58 SBML MML
ava00627 Anabaena variabilis SBML MML
azc00627 Azorhizobium caulinodans SBML MML
azo00627 Azoarcus sp. BH72 SBML MML
baa00627 Bacillus anthracis A2012 SBML MML
bac00627 Burkholderia ambifaria MC40-6 SBML MML
bam00627 Burkholderia cepacia SBML MML
ban00627 Bacillus anthracis Ames SBML MML
bat00627 Bacillus anthracis Sterne SBML MML
bav00627 Bordetella avium SBML MML
bay00627 Bacillus amyloliquefaciens SBML MML
bba00627 Bdellovibrio bacteriovorus SBML MML
bbr00627 Bordetella bronchiseptica SBML MML
bbt00627 Bradyrhizobium sp. BTAi1 SBML MML
bca00627 Bacillus cereus ATCC 10987 SBML MML
bch00627 Burkholderia cenocepacia HI2424 SBML MML
bcl00627 Bacillus clausii SBML MML
bcm00627 Burkholderia cenocepacia MC0-3 SBML MML
bcn00627 Burkholderia cenocepacia AU1054 SBML MML
bcz00627 Bacillus cereus ZK SBML MML
bid00627 Beijerinckia indica SBML MML
bja00627 Bradyrhizobium japonicum SBML MML
bma00627 Burkholderia mallei ATCC 23344 SBML MML
bmb00627 Brucella abortus 9-941 SBML MML
bmc00627 Brucella abortus S19 SBML MML
bme00627 Brucella melitensis 16M SBML MML
bmf00627 Brucella melitensis biovar Abortus SBML MML
bml00627 Burkholderia mallei NCTC 10229 SBML MML
bmn00627 Burkholderia mallei NCTC 10247 SBML MML
bmt00627 Brucella suis ATCC 23445 SBML MML
bmu00627 Burkholderia multivorans ATCC 17616 (JGI) SBML MML
bmv00627 Burkholderia mallei SAVP1 SBML MML
bpa00627 Bordetella parapertussis SBML MML
bpd00627 Burkholderia pseudomallei 668 SBML MML
bpe00627 Bordetella pertussis SBML MML
bph00627 Burkholderia phymatum SBML MML
bpl00627 Burkholderia pseudomallei 1106a SBML MML
bpm00627 Burkholderia pseudomallei 1710b SBML MML
bps00627 Burkholderia pseudomallei K96243 SBML MML
bpt00627 Bordetella petrii SBML MML
bpu00627 Bacillus pumilus SBML MML
bra00627 Bradyrhizobium sp. ORS278 SBML MML
bte00627 Burkholderia thailandensis SBML MML
btk00627 Bacillus thuringiensis 97-27 SBML MML
btl00627 Bacillus thuringiensis Al Hakam SBML MML
bur00627 Burkholderia sp. 383 SBML MML
bvi00627 Burkholderia vietnamiensis SBML MML
bwe00627 Bacillus weihenstephanensis SBML MML
bxe00627 Burkholderia xenovorans SBML MML
cak00627 Caulobacter sp. K31 SBML MML
cau00627 Chloroflexus aurantiacus SBML MML
ccr00627 Caulobacter crescentus CB15 SBML MML
cfa00627 Canis familiaris (dog) SBML MML
cgb00627 Corynebacterium glutamicum ATCC 13032 (Bielefeld) SBML MML
cgl00627 Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) SBML MML
cgr00627 Candida glabrata SBML MML
cgt00627 Corynebacterium glutamicum R SBML MML
chu00627 Cytophaga hutchinsonii SBML MML
cja00627 Cellvibrio japonicus SBML MML
cko00627 Citrobacter koseri ATCC BAA-895 SBML MML
cma00627 Caldivirga maquilingensis SBML MML
cmi00627 Clavibacter michiganensis subsp. michiganensis SBML MML
cms00627 Clavibacter michiganensis subsp. sepedonicus SBML MML
cnb00627 Cryptococcus neoformans B-3501A SBML MML
cne00627 Cryptococcus neoformans JEC21 SBML MML
cps00627 Colwellia psychrerythraea SBML MML
cre00627 Chlamydomonas reinhardtii SBML MML
csa00627 Chromohalobacter salexigens SBML MML
cti00627 Cupriavidus taiwanensis SBML MML
cvi00627 Chromobacterium violaceum SBML MML
cyt00627 Cyanothece sp. ATCC 51142 SBML MML
daag00627 (Undocumented) SBML MML
dac00627 Delftia acidovorans SBML MML
dar00627 Dechloromonas aromatica SBML MML
ddi00627 Dictyostelium discoideum SBML MML
decb00627 (Undocumented) SBML MML
dfru00627 Fugu rubripes (Japanese puffer fish) SBML MML
dha00627 Debaryomyces hansenii SBML MML
dkwa00627 Kluyveromyces waltii SBML MML
dola00627 Oryzias latipes (Japanese medaka) SBML MML
dpop00627 (Undocumented) SBML MML
dptm00627 (Undocumented) SBML MML
dsba00627 Saccharomyces bayanus SBML MML
dsh00627 Dinoroseobacter shibae SBML MML
dsmi00627 Saccharomyces mikatae SBML MML
dspd00627 (Undocumented) SBML MML
dtni00627 Tetraodon nigroviridis (green spotted puffer) SBML MML
dvvi00627 (Undocumented) SBML MML
eath00627 Arabidopsis thaliana (thale cress) (EST) SBML MML
eca00627 Erwinia carotovora SBML MML
ecc00627 Escherichia coli CFT073 (UPEC) SBML MML
ecd00627 Escherichia coli K-12 DH10B SBML MML
ece00627 Escherichia coli O157 EDL933 (EHEC) SBML MML
eci00627 Escherichia coli UTI89 (UPEC) SBML MML
ecj00627 Escherichia coli K-12 W3110 SBML MML
ecl00627 Escherichia coli ATCC 8739 SBML MML
ecm00627 Escherichia coli SECEC SBML MML
eco00627 Escherichia coli K-12 MG1655 SBML MML
ecp00627 Escherichia coli 536 (UPEC) SBML MML
ecs00627 Escherichia coli O157 Sakai (EHEC) SBML MML
ecv00627 Escherichia coli APEC O1 SBML MML
ecw00627 Escherichia coli E24377A SBML MML
ecx00627 Escherichia coli HS SBML MML
egma00627 Glycine max (soybean) (EST) SBML MML
eli00627 Erythrobacter litoralis SBML MML
emec00627 Manihot esculenta (cassava) (EST) SBML MML
emte00627 Molgula tectiformis (EST) SBML MML
emtr00627 Medicago truncatula (barrel medic) (EST) SBML MML
ent00627 Enterobacter sp. 638 SBML MML
eosa00627 Oryza sativa (rice) (EST) SBML MML
eosj00627 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00627 Picea glauca (white spruce) (EST) SBML MML
epop00627 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00627 (Undocumented) SBML MML
eppp00627 Physcomitrella patens subsp. patens (EST) SBML MML
epsi00627 Picea sitchensis (sitka spruce) (EST) SBML MML
epta00627 Pinus taeda (loblolly pine) (EST) SBML MML
eptp00627 Populus tremula (European aspen) (EST) SBML MML
esa00627 Enterobacter sakazakii SBML MML
eta00627 Erwinia tasmaniensis SBML MML
etae00627 Triticum aestivum (wheat) (EST) SBML MML
ezma00627 Zea mays (maize) (EST) SBML MML
fal00627 Frankia alni SBML MML
fgr00627 Fusarium graminearum SBML MML
fjo00627 Flavobacterium johnsoniae SBML MML
fps00627 Flavobacterium psychrophilum SBML MML
fra00627 Frankia sp. CcI3 SBML MML
fre00627 Frankia sp. EAN1pec SBML MML
ftw00627 Francisella tularensis subsp. tularensis WY96-3418 SBML MML
gbe00627 Granulobacter bethesdensis SBML MML
gdi00627 Gluconacetobacter diazotrophicus PAl 5 (Brazil) SBML MML
glo00627 Geobacter lovleyi SBML MML
gox00627 Gluconobacter oxydans SBML MML
gsu00627 Geobacter sulfurreducens SBML MML
gvi00627 Gloeobacter violaceus SBML MML
har00627 Herminiimonas arsenicoxydans SBML MML
hau00627 Herpetosiphon aurantiacus SBML MML
hch00627 Hahella chejuensis SBML MML
hsa00627 Homo sapiens (human) SBML MML
hso00627 Haemophilus somnus 129PT SBML MML
jan00627 Jannaschia sp. CCS1 SBML MML
kla00627 Kluyveromyces lactis SBML MML
kpn00627 Klebsiella pneumoniae SBML MML
kra00627 Kineococcus radiotolerans SBML MML
krh00627 Kocuria rhizophila SBML MML
lbc00627 Laccaria bicolor SBML MML
lch00627 Leptothrix cholodnii SBML MML
lpc00627 Legionella pneumophila Corby SBML MML
lpf00627 Legionella pneumophila Lens SBML MML
lpn00627 Legionella pneumophila Philadelphia 1 SBML MML
lpp00627 Legionella pneumophila Paris SBML MML
lsp00627 Lysinibacillus sphaericus SBML MML
mab00627 Mycobacterium abscessus ATCC 19977T SBML MML
mag00627 Magnetospirillum magneticum SBML MML
mar00627 Microcystis aeruginosa SBML MML
mav00627 Mycobacterium avium 104 SBML MML
mbb00627 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbo00627 Mycobacterium bovis AF2122/97 SBML MML
mbu00627 Methanococcoides burtonii SBML MML
mcc00627 Macaca mulatta (rhesus monkey) SBML MML
mem00627 Methanoculleus marisnigri SBML MML
mes00627 Mesorhizobium sp. BNC1 SBML MML
met00627 Methylobacterium sp. 4-46 SBML MML
mex00627 Methylobacterium extorquens SBML MML
mfa00627 Methylobacillus flagellatus SBML MML
mgi00627 Mycobacterium gilvum SBML MML
mgr00627 Magnaporthe grisea SBML MML
mjl00627 Mycobacterium sp. JLS SBML MML
mkm00627 Mycobacterium sp. KMS SBML MML
mle00627 Mycobacterium leprae TN SBML MML
mlo00627 Mesorhizobium loti SBML MML
mmc00627 Mycobacterium sp. MCS SBML MML
mmi00627 Mycobacterium marinum M SBML MML
mmr00627 Maricaulis maris SBML MML
mms00627 Minibacterium massiliensis SBML MML
mmw00627 Marinomonas sp. MWYL1 SBML MML
mpa00627 Mycobacterium avium paratuberculosis SBML MML
mpt00627 Methylibium petroleiphilum SBML MML
mra00627 Mycobacterium tuberculosis H37Ra SBML MML
mrd00627 Methylobacterium radiotolerans SBML MML
mse00627 Metallosphaera sedula SBML MML
msm00627 Mycobacterium smegmatis SBML MML
mst00627 Methanosphaera stadtmanae SBML MML
mtc00627 Mycobacterium tuberculosis CDC1551 SBML MML
mtf00627 Mycobacterium tuberculosis F11 SBML MML
mtu00627 Mycobacterium tuberculosis H37Rv SBML MML
mul00627 Mycobacterium ulcerans SBML MML
mva00627 Mycobacterium vanbaalenii SBML MML
mxa00627 Myxococcus xanthus SBML MML
nar00627 Novosphingobium aromaticivorans SBML MML
nca00627 Nocardioides sp. JS614 SBML MML
ncr00627 Neurospora crassa SBML MML
nfa00627 Nocardia farcinica SBML MML
nmn00627 Neisseria meningitidis 053442 (serogroup C) SBML MML
npu00627 Nostoc punctiforme SBML MML
nve00627 Nematostella vectensis (sea anemone) SBML MML
oaa00627 Ornithorhynchus anatinus (platypus) SBML MML
oan00627 Ochrobactrum anthropi SBML MML
olu00627 Ostreococcus lucimarinus SBML MML
osa00627 Oryza sativa japonica (Japanese rice) SBML MML
pae00627 Pseudomonas aeruginosa PAO1 SBML MML
pan00627 Podospora anserina SBML MML
pap00627 Pseudomonas aeruginosa PA7 SBML MML
par00627 Psychrobacter arcticum SBML MML
pat00627 Pseudoalteromonas atlantica SBML MML
pau00627 Pseudomonas aeruginosa UCBPP-PA14 SBML MML
pcr00627 Psychrobacter cryohalolentis SBML MML
pde00627 Paracoccus denitrificans SBML MML
pen00627 Pseudomonas entomophila SBML MML
pfl00627 Pseudomonas fluorescens Pf-5 SBML MML
pfo00627 Pseudomonas fluorescens Pf0-1 SBML MML
pha00627 Pseudoalteromonas haloplanktis SBML MML
pic00627 Pichia stipitis SBML MML
pla00627 Parvibaculum lavamentivorans SBML MML
plu00627 Photorhabdus luminescens SBML MML
pmf00627 Prochlorococcus marinus MIT 9303 SBML MML
pmg00627 Prochlorococcus marinus MIT 9301 SBML MML
pmi00627 Prochlorococcus marinus MIT9312 SBML MML
pmo00627 Petrotoga mobilis SBML MML
pmt00627 Prochlorococcus marinus MIT9313 SBML MML
pna00627 Polaromonas naphthalenivorans SBML MML
pne00627 Polynucleobacter necessarius SBML MML
pnu00627 Polynucleobacter sp. QLW-P1DMWA-1 SBML MML
pol00627 Polaromonas sp. JS666 SBML MML
ppf00627 Pseudomonas putida F1 SBML MML
ppg00627 Pseudomonas putida GB-1 SBML MML
ppu00627 Pseudomonas putida KT2440 SBML MML
ppw00627 Pseudomonas putida W619 SBML MML
prw00627 Psychrobacter sp. PRwf-1 SBML MML
psa00627 Pseudomonas stutzeri SBML MML
psb00627 Pseudomonas syringae pv. syringae B728a SBML MML
psp00627 Pseudomonas syringae pv. phaseolicola 1448A SBML MML
pst00627 Pseudomonas syringae pv. tomato DC3000 SBML MML
pto00627 Picrophilus torridus SBML MML
rba00627 Rhodopirellula baltica SBML MML
rca00627 Roseiflexus castenholzii DSM13941 SBML MML
rde00627 Roseobacter denitrificans SBML MML
rec00627 Rhizobium etli CIAT 652 SBML MML
reh00627 Ralstonia eutropha H16 SBML MML
ret00627 Rhizobium etli CFN 42 SBML MML
reu00627 Ralstonia eutropha JMP134 SBML MML
rfr00627 Rhodoferax ferrireducens SBML MML
rha00627 Rhodococcus sp. RHA1 SBML MML
rle00627 Rhizobium leguminosarum SBML MML
rme00627 Ralstonia metallidurans SBML MML
rno00627 Rattus norvegicus (rat) SBML MML
rpa00627 Rhodopseudomonas palustris CGA009 SBML MML
rpb00627 Rhodopseudomonas palustris HaA2 SBML MML
rpc00627 Rhodopseudomonas palustris BisB18 SBML MML
rpd00627 Rhodopseudomonas palustris BisB5 SBML MML
rpe00627 Rhodopseudomonas palustris BisA53 SBML MML
rpt00627 Rhodopseudomonas palustris TIE-1 SBML MML
rrs00627 Roseiflexus sp. RS-1 SBML MML
rru00627 Rhodospirillum rubrum SBML MML
rsa00627 Renibacterium salmoninarum SBML MML
rso00627 Ralstonia solanacearum SBML MML
rsp00627 Rhodobacter sphaeroides 2.4.1 SBML MML
rsq00627 Rhodobacter sphaeroides ATCC 17025 SBML MML
rxy00627 Rubrobacter xylanophilus SBML MML
saa00627 Staphylococcus aureus USA300 SBML MML
sab00627 Staphylococcus aureus RF122 SBML MML
sae00627 Staphylococcus aureus Newman SBML MML
sah00627 Staphylococcus aureus JH1 SBML MML
sai00627 Sulfolobus acidocaldarius SBML MML
saj00627 Staphylococcus aureus JH9 SBML MML
sal00627 Sphingopyxis alaskensis SBML MML
saq00627 Salinispora arenicola SBML MML
sat00627 Syntrophus aciditrophicus SBML MML
saw00627 Staphylococcus aureus Mu3 SBML MML
sax00627 Staphylococcus aureus USA300 TCH1516 SBML MML
saz00627 Shewanella amazonensis SBML MML
sbc00627 Shigella boydii CDC 3083-94 SBML MML
sbl00627 Shewanella baltica OS155 SBML MML
sbm00627 Shewanella baltica OS185 SBML MML
sbn00627 Shewanella baltica OS195 SBML MML
sbo00627 Shigella boydii Sb227 SBML MML
sce00627 Saccharomyces cerevisiae SBML MML
scl00627 Sorangium cellulosum SBML MML
sco00627 Streptomyces coelicolor SBML MML
sdn00627 Shewanella denitrificans SBML MML
sdy00627 Shigella dysenteriae SBML MML
sec00627 Salmonella enterica subsp. enterica serovar Choleraesuis SBML MML
sen00627 Saccharopolyspora erythraea SBML MML
sep00627 Staphylococcus epidermidis ATCC 12228 SBML MML
ser00627 Staphylococcus epidermidis RP62A SBML MML
ses00627 Salmonella enterica subsp. arizonae SBML MML
sfl00627 Shigella flexneri 301 (serotype 2a) SBML MML
sfv00627 Shigella flexneri 8401 (serotype 5b) SBML MML
she00627 Shewanella sp. MR-4 SBML MML
shl00627 Shewanella halifaxensis SBML MML
shm00627 Shewanella sp. MR-7 SBML MML
shn00627 Shewanella sp. ANA-3 SBML MML
shw00627 Shewanella sp. W3-18-1 SBML MML
sil00627 Ruegeria pomeroyi SBML MML
sit00627 Silicibacter sp. TM1040 SBML MML
sma00627 Streptomyces avermitilis SBML MML
smd00627 Sinorhizobium medicae SBML MML
sme00627 Sinorhizobium meliloti SBML MML
sml00627 Stenotrophomonas maltophilia SBML MML
son00627 Shewanella oneidensis SBML MML
spc00627 Shewanella putrefaciens SBML MML
spe00627 Serratia proteamaculans SBML MML
spl00627 Shewanella pealeana SBML MML
spq00627 Salmonella enterica subsp. enterica serovar Paratyphi B SBML MML
spt00627 Salmonella enterica subsp. enterica serovar Paratyphi A SBML MML
sru00627 Salinibacter ruber SBML MML
sse00627 Shewanella sediminis SBML MML
ssn00627 Shigella sonnei SBML MML
sso00627 Sulfolobus solfataricus SBML MML
ssp00627 Staphylococcus saprophyticus SBML MML
stm00627 Salmonella typhimurium LT2 SBML MML
sto00627 Sulfolobus tokodaii SBML MML
stp00627 Salinispora tropica SBML MML
stt00627 Salmonella enterica subsp. enterica serovar Typhi Ty2 SBML MML
sty00627 Salmonella enterica subsp. enterica serovar Typhi CT18 SBML MML
sus00627 Solibacter usitatus SBML MML
swd00627 Shewanella woodyi ATCC 51908 SBML MML
swi00627 Sphingomonas wittichii SBML MML
syc00627 Synechococcus elongatus PCC6301 SBML MML
syd00627 Synechococcus sp. CC9605 SBML MML
syf00627 Synechococcus elongatus PCC7942 SBML MML
syg00627 Synechococcus sp. CC9311 SBML MML
syn00627 Synechocystis sp. PCC6803 SBML MML
syp00627 Synechococcus sp. PCC7002 SBML MML
syr00627 Synechococcus sp. RCC307 SBML MML
syw00627 Synechococcus sp. WH8102 SBML MML
syx00627 Synechococcus sp. WH7803 SBML MML
tbd00627 Thiobacillus denitrificans SBML MML
tel00627 Thermosynechococcus elongatus SBML MML
ter00627 Trichodesmium erythraeum SBML MML
tet00627 Tetrahymena thermophila SBML MML
tfu00627 Thermobifida fusca SBML MML
tth00627 Thermus thermophilus HB27 SBML MML
ttj00627 Thermus thermophilus HB8 SBML MML
uma00627 Ustilago maydis SBML MML
vei00627 Verminephrobacter eiseniae SBML MML
vha00627 Vibrio harveyi SBML MML
vpa00627 Vibrio parahaemolyticus SBML MML
vpo00627 Vanderwaltozyma polyspora SBML MML
vvu00627 Vibrio vulnificus CMCP6 SBML MML
vvy00627 Vibrio vulnificus YJ016 SBML MML
xac00627 Xanthomonas axonopodis SBML MML
xau00627 Xanthobacter autotrophicus SBML MML
xcb00627 Xanthomonas campestris pv. campestris 8004 SBML MML
xcc00627 Xanthomonas campestris pv. campestris ATCC 33913 SBML MML
xcv00627 Xanthomonas campestris pv. vesicatoria SBML MML
xom00627 Xanthomonas oryzae MAFF311018 SBML MML
xoo00627 Xanthomonas oryzae KACC10331 SBML MML
yen00627 Yersinia enterocolitica SBML MML
yli00627 Yarrowia lipolytica SBML MML
ypa00627 Yersinia pestis Antiqua SBML MML
ype00627 Yersinia pestis CO92 SBML MML
ypg00627 Yersinia pestis Angola SBML MML
ypi00627 Yersinia pseudotuberculosis IP31758 SBML MML
ypk00627 Yersinia pestis KIM SBML MML
ypm00627 Yersinia pestis Mediaevails SBML MML
ypn00627 Yersinia pestis Nepal516 SBML MML
ypp00627 Yersinia pestis Pestoides SBML MML
yps00627 Yersinia pseudotuberculosis IP32953 SBML MML
ypy00627 Yersinia pseudotuberculosis YPIII SBML MML
zmo00627 Zymomonas mobilis SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.