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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00510: (Undocumented)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aau00510 Arthrobacter aurescens SBML MML
aba00510 Acidobacteria bacterium SBML MML
abm00510 Acinetobacter baumannii SDF SBML MML
abo00510 Alcanivorax borkumensis SBML MML
aby00510 Acinetobacter baumannii AYE SBML MML
ace00510 Acidothermus cellulolyticus SBML MML
afm00510 Aspergillus fumigatus SBML MML
afu00510 Archaeoglobus fulgidus SBML MML
aga00510 Anopheles gambiae (mosquito) SBML MML
ago00510 Ashbya gossypii (Eremothecium gossypii) SBML MML
aha00510 Aeromonas hydrophila SBML MML
amt00510 Alkaliphilus metalliredigens SBML MML
ang00510 Aspergillus niger SBML MML
ani00510 Aspergillus nidulans SBML MML
aor00510 Aspergillus oryzae SBML MML
apl00510 Actinobacillus pleuropneumoniae L20 (serotype 5b) SBML MML
atc00510 Agrobacterium tumefaciens C58 (Cereon) SBML MML
ath00510 Arabidopsis thaliana (thale cress) SBML MML
atu00510 Agrobacterium tumefaciens C58 SBML MML
ava00510 Anabaena variabilis SBML MML
azo00510 Azoarcus sp. BH72 SBML MML
baa00510 Bacillus anthracis A2012 SBML MML
ban00510 Bacillus anthracis Ames SBML MML
bar00510 Bacillus anthracis Ames 0581 SBML MML
bat00510 Bacillus anthracis Sterne SBML MML
bay00510 Bacillus amyloliquefaciens SBML MML
bba00510 Bdellovibrio bacteriovorus SBML MML
bce00510 Bacillus cereus ATCC 14579 SBML MML
bcy00510 Bacillus cytotoxis NVH 391-98 SBML MML
bcz00510 Bacillus cereus ZK SBML MML
bha00510 Bacillus halodurans SBML MML
bld00510 Bacillus licheniformis DSM13 SBML MML
bli00510 Bacillus licheniformis ATCC 14580 SBML MML
bme00510 Brucella melitensis 16M SBML MML
bmu00510 Burkholderia multivorans ATCC 17616 (JGI) SBML MML
bmy00510 Brugia malayi (filaria) SBML MML
bpl00510 Burkholderia pseudomallei 1106a SBML MML
bsu00510 Bacillus subtilis SBML MML
bta00510 Bos taurus (cow) SBML MML
btk00510 Bacillus thuringiensis 97-27 SBML MML
btl00510 Bacillus thuringiensis Al Hakam SBML MML
bwe00510 Bacillus weihenstephanensis SBML MML
cal00510 Candida albicans SBML MML
cau00510 Chloroflexus aurantiacus SBML MML
cba00510 Clostridium botulinum A ATCC 19397 SBML MML
cbb00510 Clostridium botulinum B1 Okra SBML MML
cbf00510 Clostridium botulinum F Langeland SBML MML
cbh00510 Clostridium botulinum A Hall SBML MML
cbl00510 Clostridium botulinum A3 Loch Maree SBML MML
cbo00510 Clostridium botulinum A ATCC 3502 SBML MML
cdi00510 Corynebacterium diphtheriae SBML MML
cel00510 Caenorhabditis elegans (nematode) SBML MML
cfa00510 Canis familiaris (dog) SBML MML
cgb00510 Corynebacterium glutamicum ATCC 13032 (Bielefeld) SBML MML
cgl00510 Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) SBML MML
cgr00510 Candida glabrata SBML MML
cgt00510 Corynebacterium glutamicum R SBML MML
cho00510 Cryptosporidium hominis SBML MML
chu00510 Cytophaga hutchinsonii SBML MML
ckl00510 Clostridium kluyveri DSM 555 SBML MML
cma00510 Caldivirga maquilingensis SBML MML
cme00510 Cyanidioschyzon merolae SBML MML
cmi00510 Clavibacter michiganensis subsp. michiganensis SBML MML
cms00510 Clavibacter michiganensis subsp. sepedonicus SBML MML
cnb00510 Cryptococcus neoformans B-3501A SBML MML
cne00510 Cryptococcus neoformans JEC21 SBML MML
cpv00510 Cryptosporidium parvum SBML MML
cre00510 Chlamydomonas reinhardtii SBML MML
ctc00510 Clostridium tetani E88 SBML MML
cur00510 Corynebacterium urealyticum SBML MML
cvi00510 Chromobacterium violaceum SBML MML
daag00510 (Undocumented) SBML MML
dame00510 (Undocumented) SBML MML
dbmo00510 Bombyx mori (silkmoth) SBML MML
dcbr00510 (Undocumented) SBML MML
dcin00510 (Undocumented) SBML MML
ddi00510 Dictyostelium discoideum SBML MML
decb00510 (Undocumented) SBML MML
dfru00510 Fugu rubripes (Japanese puffer fish) SBML MML
dha00510 Debaryomyces hansenii SBML MML
dkwa00510 Kluyveromyces waltii SBML MML
dme00510 Drosophila melanogaster (fruit fly) SBML MML
dola00510 Oryzias latipes (Japanese medaka) SBML MML
dota00510 Ostreococcus tauri SBML MML
dpkn00510 (Undocumented) SBML MML
dpo00510 Drosophila pseudoobscura pseudoobscura SBML MML
dpop00510 (Undocumented) SBML MML
dptm00510 (Undocumented) SBML MML
dre00510 Danio rerio (zebrafish) SBML MML
dsba00510 Saccharomyces bayanus SBML MML
dsmi00510 Saccharomyces mikatae SBML MML
dspd00510 (Undocumented) SBML MML
dtni00510 Tetraodon nigroviridis (green spotted puffer) SBML MML
dtps00510 (Undocumented) SBML MML
dvvi00510 (Undocumented) SBML MML
eacp00510 (Undocumented) SBML MML
eath00510 Arabidopsis thaliana (thale cress) (EST) SBML MML
ebna00510 Brassica napus (rape) (EST) SBML MML
ebvl00510 Beta vulgaris (beet) (EST) SBML MML
ecan00510 Capsicum annuum (chile pepper) (EST) SBML MML
ecn00510 Ehrlichia canis SBML MML
ecsi00510 Citrus sinensis (Valencia orange) (EST) SBML MML
ecsv00510 Ciona savignyi (EST) SBML MML
eees00510 Euphorbia esula (leafy spurge) (EST) SBML MML
efar00510 Festuca arundinacea (tall fescue) (EST) SBML MML
egar00510 Gossypium arboreum (tree cotton) (EST) SBML MML
eghi00510 Gossypium hirsutum (upland cotton) (EST) SBML MML
egma00510 Glycine max (soybean) (EST) SBML MML
egra00510 Gossypium raimondii (EST) SBML MML
ehan00510 Helianthus annuus (sunflower) (EST) SBML MML
ehi00510 Entamoeba histolytica SBML MML
ehvu00510 Hordeum vulgare (barley) (EST) SBML MML
eini00510 Ipomoea nil (Japanese morning glory) (EST) SBML MML
elja00510 Lotus japonicus (lotus) (EST) SBML MML
elpe00510 Lactuca perennis (blue lettuce) (EST) SBML MML
elsi00510 Lactuca saligna (willow-leaf lettuce) (EST) SBML MML
elst00510 Lactuca sativa (lettuce) (EST) SBML MML
elvi00510 Lactuca virosa (wild lettuce) (EST) SBML MML
emec00510 Manihot esculenta (cassava) (EST) SBML MML
emte00510 Molgula tectiformis (EST) SBML MML
emtr00510 Medicago truncatula (barrel medic) (EST) SBML MML
enbe00510 Nicotiana benthamiana (EST) SBML MML
enta00510 Nicotiana tabacum (tobacco) (EST) SBML MML
eosa00510 Oryza sativa (rice) (EST) SBML MML
eosi00510 Oryza sativa indica (Indian rice) (EST) SBML MML
eosj00510 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00510 Picea glauca (white spruce) (EST) SBML MML
epop00510 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00510 (Undocumented) SBML MML
eppi00510 Pinus pinaster (maritime pine) (EST) SBML MML
eppp00510 Physcomitrella patens subsp. patens (EST) SBML MML
epps00510 Prunus persica (peach) (EST) SBML MML
epsi00510 Picea sitchensis (sitka spruce) (EST) SBML MML
epta00510 Pinus taeda (loblolly pine) (EST) SBML MML
eptp00510 Populus tremula (European aspen) (EST) SBML MML
esa00510 Enterobacter sakazakii SBML MML
esbi00510 Sorghum bicolor (sorghum) (EST) SBML MML
esja00510 Schistosoma japonicum (fluke) (EST) SBML MML
esly00510 Solanum lycopersicum (tomato) (EST) SBML MML
esof00510 Saccharum officinarum (sugarcane) (EST) SBML MML
espp00510 (Undocumented) SBML MML
espu00510 Strongylocentrotus purpuratus (purple sea urchin) (EST) SBML MML
estu00510 Solanum tuberosum (potato) (EST) SBML MML
etae00510 Triticum aestivum (wheat) (EST) SBML MML
evvi00510 Vitis vinifera (wine grape) (EST) SBML MML
ezel00510 (Undocumented) SBML MML
ezma00510 Zea mays (maize) (EST) SBML MML
fal00510 Frankia alni SBML MML
fgr00510 Fusarium graminearum SBML MML
fjo00510 Flavobacterium johnsoniae SBML MML
fps00510 Flavobacterium psychrophilum SBML MML
fra00510 Frankia sp. CcI3 SBML MML
fre00510 Frankia sp. EAN1pec SBML MML
gbe00510 Granulobacter bethesdensis SBML MML
gfo00510 Gramella forsetii SBML MML
gga00510 Gallus gallus (chicken) SBML MML
gla00510 Giardia lamblia SBML MML
gme00510 Geobacter metallireducens SBML MML
hau00510 Herpetosiphon aurantiacus SBML MML
hbu00510 Hyperthermus butylicus SBML MML
hsa00510 Homo sapiens (human) SBML MML
hwa00510 Haloquadratum walsbyi SBML MML
iho00510 Ignicoccus hospitalis SBML MML
kcr00510 Candidatus Korarchaeum cryptofilum SBML MML
kla00510 Kluyveromyces lactis SBML MML
kpn00510 Klebsiella pneumoniae SBML MML
kra00510 Kineococcus radiotolerans SBML MML
lbc00510 Laccaria bicolor SBML MML
lbf00510 Leptospira biflexa serovar Patoc Patoc 1 (Ames) SBML MML
lbi00510 Leptospira biflexa serovar Patoc Patoc 1 (Paris) SBML MML
lca00510 Lactobacillus casei ATCC 334 SBML MML
llm00510 Lactococcus lactis subsp. cremoris MG1363 SBML MML
lma00510 Leishmania major SBML MML
lpl00510 Lactobacillus plantarum WCFS1 SBML MML
lsp00510 Lysinibacillus sphaericus SBML MML
lwe00510 Listeria welshimeri SLCC5334 SBML MML
mab00510 Mycobacterium abscessus ATCC 19977T SBML MML
mac00510 Methanosarcina acetivorans SBML MML
mae00510 Methanococcus aeolicus SBML MML
mav00510 Mycobacterium avium 104 SBML MML
mba00510 Methanosarcina barkeri SBML MML
mbb00510 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbn00510 Candidatus Methanoregula boonei SBML MML
mbo00510 Mycobacterium bovis AF2122/97 SBML MML
mbr00510 Monosiga brevicollis SBML MML
mbu00510 Methanococcoides burtonii SBML MML
mcc00510 Macaca mulatta (rhesus monkey) SBML MML
mdo00510 Monodelphis domestica (opossum) SBML MML
mgi00510 Mycobacterium gilvum SBML MML
mgl00510 Malassezia globosa SBML MML
mgr00510 Magnaporthe grisea SBML MML
mja00510 Methanococcus jannaschii SBML MML
mjl00510 Mycobacterium sp. JLS SBML MML
mka00510 Methanopyrus kandleri SBML MML
mle00510 Mycobacterium leprae TN SBML MML
mma00510 Methanosarcina mazei SBML MML
mmc00510 Mycobacterium sp. MCS SBML MML
mmi00510 Mycobacterium marinum M SBML MML
mmp00510 Methanococcus maripaludis S2 SBML MML
mmq00510 Methanococcus maripaludis C5 SBML MML
mmu00510 Mus musculus (mouse) SBML MML
mmw00510 Marinomonas sp. MWYL1 SBML MML
mmx00510 Methanococcus maripaludis C6 SBML MML
mmz00510 Methanococcus maripaludis C7 SBML MML
mpa00510 Mycobacterium avium paratuberculosis SBML MML
mpt00510 Methylibium petroleiphilum SBML MML
mra00510 Mycobacterium tuberculosis H37Ra SBML MML
msi00510 Methanobrevibacter smithii ATCC 35061 SBML MML
msm00510 Mycobacterium smegmatis SBML MML
mst00510 Methanosphaera stadtmanae SBML MML
mtc00510 Mycobacterium tuberculosis CDC1551 SBML MML
mtf00510 Mycobacterium tuberculosis F11 SBML MML
mth00510 Methanobacterium thermoautotrophicum SBML MML
mtp00510 Methanosaeta thermophila SBML MML
mtu00510 Mycobacterium tuberculosis H37Rv SBML MML
mul00510 Mycobacterium ulcerans SBML MML
mvn00510 Methanococcus vannielii SBML MML
nca00510 Nocardioides sp. JS614 SBML MML
ncr00510 Neurospora crassa SBML MML
nmr00510 Nitrosopumilus maritimus SBML MML
nph00510 Natronomonas pharaonis SBML MML
npu00510 Nostoc punctiforme SBML MML
nve00510 Nematostella vectensis (sea anemone) SBML MML
oaa00510 Ornithorhynchus anatinus (platypus) SBML MML
olu00510 Ostreococcus lucimarinus SBML MML
osa00510 Oryza sativa japonica (Japanese rice) SBML MML
pab00510 Pyrococcus abyssi SBML MML
pae00510 Pseudomonas aeruginosa PAO1 SBML MML
pai00510 Pyrobaculum aerophilum SBML MML
pan00510 Podospora anserina SBML MML
pas00510 Pyrobaculum arsenaticum SBML MML
pca00510 Pelobacter carbinolicus SBML MML
pcl00510 Pyrobaculum calidifontis SBML MML
pfa00510 Plasmodium falciparum 3D7 SBML MML
pfu00510 Pyrococcus furiosus SBML MML
pho00510 Pyrococcus horikoshii SBML MML
pic00510 Pichia stipitis SBML MML
pis00510 Pyrobaculum islandicum SBML MML
ppp00510 Physcomitrella patens subsp. patens SBML MML
pto00510 Picrophilus torridus SBML MML
ptr00510 Pan troglodytes (chimpanzee) SBML MML
pyo00510 Plasmodium yoelii SBML MML
rba00510 Rhodopirellula baltica SBML MML
rca00510 Roseiflexus castenholzii DSM13941 SBML MML
rci00510 Uncultured methanogenic archaeon RC-I SBML MML
rha00510 Rhodococcus sp. RHA1 SBML MML
rno00510 Rattus norvegicus (rat) SBML MML
rpa00510 Rhodopseudomonas palustris CGA009 SBML MML
rpt00510 Rhodopseudomonas palustris TIE-1 SBML MML
rrs00510 Roseiflexus sp. RS-1 SBML MML
rsa00510 Renibacterium salmoninarum SBML MML
rso00510 Ralstonia solanacearum SBML MML
sac00510 Staphylococcus aureus COL SBML MML
sae00510 Staphylococcus aureus Newman SBML MML
sah00510 Staphylococcus aureus JH1 SBML MML
sai00510 Sulfolobus acidocaldarius SBML MML
saj00510 Staphylococcus aureus JH9 SBML MML
sao00510 Staphylococcus aureus NCTC8325 SBML MML
saq00510 Salinispora arenicola SBML MML
sar00510 Staphylococcus aureus MRSA252 SBML MML
sat00510 Syntrophus aciditrophicus SBML MML
sau00510 Staphylococcus aureus N315 SBML MML
sav00510 Staphylococcus aureus Mu50 SBML MML
saw00510 Staphylococcus aureus Mu3 SBML MML
sax00510 Staphylococcus aureus USA300 TCH1516 SBML MML
sce00510 Saccharomyces cerevisiae SBML MML
scl00510 Sorangium cellulosum SBML MML
sco00510 Streptomyces coelicolor SBML MML
sen00510 Saccharopolyspora erythraea SBML MML
sep00510 Staphylococcus epidermidis ATCC 12228 SBML MML
ser00510 Staphylococcus epidermidis RP62A SBML MML
sgr00510 Streptomyces griseus SBML MML
sma00510 Streptomyces avermitilis SBML MML
smr00510 Staphylothermus marinus SBML MML
spo00510 Schizosaccharomyces pombe SBML MML
spu00510 Strongylocentrotus purpuratus (purple sea urchin) SBML MML
sso00510 Sulfolobus solfataricus SBML MML
ssp00510 Staphylococcus saprophyticus SBML MML
sto00510 Sulfolobus tokodaii SBML MML
stp00510 Salinispora tropica SBML MML
syf00510 Synechococcus elongatus PCC7942 SBML MML
syr00510 Synechococcus sp. RCC307 SBML MML
syx00510 Synechococcus sp. WH7803 SBML MML
tan00510 Theileria annulata SBML MML
tbr00510 Trypanosoma brucei SBML MML
tca00510 Tribolium castaneum (red flour beetle) SBML MML
tcr00510 Trypanosoma cruzi SBML MML
tet00510 Tetrahymena thermophila SBML MML
tfu00510 Thermobifida fusca SBML MML
tko00510 Thermococcus kodakaraensis SBML MML
tne00510 Thermoproteus neutrophilus SBML MML
tpe00510 Thermofilum pendens SBML MML
tpv00510 Theileria parva SBML MML
tva00510 Trichomonas vaginalis SBML MML
tvo00510 Thermoplasma volcanium SBML MML
uma00510 Ustilago maydis SBML MML
vha00510 Vibrio harveyi SBML MML
vpo00510 Vanderwaltozyma polyspora SBML MML
xla00510 Xenopus laevis (African clawed frog) SBML MML
xom00510 Xanthomonas oryzae MAFF311018 SBML MML
xoo00510 Xanthomonas oryzae KACC10331 SBML MML
xtr00510 Xenopus tropicalis (western clawed frog) SBML MML
yli00510 Yarrowia lipolytica SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.