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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00430: Taurine and hypotaurine metabolism

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aau00430 Arthrobacter aurescens SBML MML
aav00430 Acidovorax avenae SBML MML
abc00430 Acinetobacter baumannii ACICU SBML MML
abm00430 Acinetobacter baumannii SDF SBML MML
abu00430 Arcobacter butzleri SBML MML
aby00430 Acinetobacter baumannii AYE SBML MML
acb00430 Acinetobacter baumannii ATCC 17978 SBML MML
ace00430 Acidothermus cellulolyticus SBML MML
aci00430 Acinetobacter sp. ADP1 SBML MML
acl00430 Acholeplasma laidlawii SBML MML
acr00430 Acidiphilium cryptum JF-5 SBML MML
ade00430 Anaeromyxobacter dehalogenans 2CP-C SBML MML
aeh00430 Alkalilimnicola ehrlichei SBML MML
afm00430 Aspergillus fumigatus SBML MML
afu00430 Archaeoglobus fulgidus SBML MML
afw00430 Anaeromyxobacter sp. Fw109-5 SBML MML
aga00430 Anopheles gambiae (mosquito) SBML MML
aha00430 Aeromonas hydrophila SBML MML
ajs00430 Acidovorax sp. JS42 SBML MML
amr00430 Acaryochloris marina SBML MML
amt00430 Alkaliphilus metalliredigens SBML MML
ana00430 Anabaena sp. PCC7120 SBML MML
ang00430 Aspergillus niger SBML MML
ani00430 Aspergillus nidulans SBML MML
aor00430 Aspergillus oryzae SBML MML
apa00430 Actinobacillus pleuropneumoniae AP76 (serotype 7) SBML MML
ape00430 Aeropyrum pernix SBML MML
apj00430 Actinobacillus pleuropneumoniae JL03 (serotype 3) SBML MML
apl00430 Actinobacillus pleuropneumoniae L20 (serotype 5b) SBML MML
art00430 Arthrobacter sp. FB24 SBML MML
asa00430 Aeromonas salmonicida SBML MML
asu00430 Actinobacillus succinogenes SBML MML
ath00430 Arabidopsis thaliana (thale cress) SBML MML
ava00430 Anabaena variabilis SBML MML
azc00430 Azorhizobium caulinodans SBML MML
azo00430 Azoarcus sp. BH72 SBML MML
baa00430 Bacillus anthracis A2012 SBML MML
bab00430 Buchnera aphidicola Bp SBML MML
bac00430 Burkholderia ambifaria MC40-6 SBML MML
bad00430 Bifidobacterium adolescentis SBML MML
baf00430 Borrelia afzelii SBML MML
bam00430 Burkholderia cepacia SBML MML
ban00430 Bacillus anthracis Ames SBML MML
bar00430 Bacillus anthracis Ames 0581 SBML MML
bas00430 Buchnera aphidicola Sg SBML MML
bat00430 Bacillus anthracis Sterne SBML MML
bav00430 Bordetella avium SBML MML
bay00430 Bacillus amyloliquefaciens SBML MML
bba00430 Bdellovibrio bacteriovorus SBML MML
bbr00430 Bordetella bronchiseptica SBML MML
bbt00430 Bradyrhizobium sp. BTAi1 SBML MML
bca00430 Bacillus cereus ATCC 10987 SBML MML
bcc00430 Buchnera aphidicola Cc SBML MML
bce00430 Bacillus cereus ATCC 14579 SBML MML
bch00430 Burkholderia cenocepacia HI2424 SBML MML
bci00430 Baumannia cicadellinicola SBML MML
bcl00430 Bacillus clausii SBML MML
bcm00430 Burkholderia cenocepacia MC0-3 SBML MML
bcn00430 Burkholderia cenocepacia AU1054 SBML MML
bcy00430 Bacillus cytotoxis NVH 391-98 SBML MML
bcz00430 Bacillus cereus ZK SBML MML
bfr00430 Bacteroides fragilis YCH46 SBML MML
bfs00430 Bacteroides fragilis NCTC9343 SBML MML
bga00430 Borrelia garinii SBML MML
bha00430 Bacillus halodurans SBML MML
bid00430 Beijerinckia indica SBML MML
bja00430 Bradyrhizobium japonicum SBML MML
bld00430 Bacillus licheniformis DSM13 SBML MML
bli00430 Bacillus licheniformis ATCC 14580 SBML MML
blo00430 Bifidobacterium longum NCC2705 SBML MML
bma00430 Burkholderia mallei ATCC 23344 SBML MML
bmc00430 Brucella abortus S19 SBML MML
bme00430 Brucella melitensis 16M SBML MML
bmf00430 Brucella melitensis biovar Abortus SBML MML
bml00430 Burkholderia mallei NCTC 10229 SBML MML
bmn00430 Burkholderia mallei NCTC 10247 SBML MML
bmt00430 Brucella suis ATCC 23445 SBML MML
bmu00430 Burkholderia multivorans ATCC 17616 (JGI) SBML MML
bmv00430 Burkholderia mallei SAVP1 SBML MML
bmy00430 Brugia malayi (filaria) SBML MML
bov00430 Brucella ovis SBML MML
bpa00430 Bordetella parapertussis SBML MML
bpd00430 Burkholderia pseudomallei 668 SBML MML
bpe00430 Bordetella pertussis SBML MML
bph00430 Burkholderia phymatum SBML MML
bpl00430 Burkholderia pseudomallei 1106a SBML MML
bpm00430 Burkholderia pseudomallei 1710b SBML MML
bps00430 Burkholderia pseudomallei K96243 SBML MML
bpt00430 Bordetella petrii SBML MML
bpu00430 Bacillus pumilus SBML MML
bra00430 Bradyrhizobium sp. ORS278 SBML MML
bsu00430 Bacillus subtilis SBML MML
bte00430 Burkholderia thailandensis SBML MML
bth00430 Bacteroides thetaiotaomicron SBML MML
btk00430 Bacillus thuringiensis 97-27 SBML MML
btl00430 Bacillus thuringiensis Al Hakam SBML MML
buc00430 Buchnera aphidicola APS SBML MML
bur00430 Burkholderia sp. 383 SBML MML
bvi00430 Burkholderia vietnamiensis SBML MML
bvu00430 Bacteroides vulgatus SBML MML
bwe00430 Bacillus weihenstephanensis SBML MML
bxe00430 Burkholderia xenovorans SBML MML
cac00430 Clostridium acetobutylicum SBML MML
cak00430 Caulobacter sp. K31 SBML MML
cau00430 Chloroflexus aurantiacus SBML MML
cba00430 Clostridium botulinum A ATCC 19397 SBML MML
cbb00430 Clostridium botulinum B1 Okra SBML MML
cbe00430 Clostridium beijerinckii SBML MML
cbf00430 Clostridium botulinum F Langeland SBML MML
cbh00430 Clostridium botulinum A Hall SBML MML
cbk00430 Clostridium botulinum B Eklund 17B SBML MML
cbl00430 Clostridium botulinum A3 Loch Maree SBML MML
cbo00430 Clostridium botulinum A ATCC 3502 SBML MML
cco00430 Campylobacter concisus 13826 SBML MML
ccr00430 Caulobacter crescentus CB15 SBML MML
ccv00430 Campylobacter curvus SBML MML
cdf00430 Clostridium difficile SBML MML
cdi00430 Corynebacterium diphtheriae SBML MML
cef00430 Corynebacterium efficiens SBML MML
cel00430 Caenorhabditis elegans (nematode) SBML MML
cfa00430 Canis familiaris (dog) SBML MML
cff00430 Campylobacter fetus SBML MML
cgb00430 Corynebacterium glutamicum ATCC 13032 (Bielefeld) SBML MML
cgl00430 Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) SBML MML
cgt00430 Corynebacterium glutamicum R SBML MML
cha00430 Campylobacter hominis ATCC BAA-381 SBML MML
chy00430 Carboxydothermus hydrogenoformans SBML MML
cja00430 Cellvibrio japonicus SBML MML
cjd00430 Campylobacter jejuni subsp. doylei 269.97 SBML MML
cje00430 Campylobacter jejuni NCTC11168 SBML MML
cjj00430 Campylobacter jejuni 81-176 SBML MML
cjk00430 Corynebacterium jeikeium SBML MML
cjr00430 Campylobacter jejuni RM1221 SBML MML
cju00430 Campylobacter jejuni 81116 SBML MML
ckl00430 Clostridium kluyveri DSM 555 SBML MML
cko00430 Citrobacter koseri ATCC BAA-895 SBML MML
cme00430 Cyanidioschyzon merolae SBML MML
cmi00430 Clavibacter michiganensis subsp. michiganensis SBML MML
cms00430 Clavibacter michiganensis subsp. sepedonicus SBML MML
cnb00430 Cryptococcus neoformans B-3501A SBML MML
cne00430 Cryptococcus neoformans JEC21 SBML MML
cno00430 Clostridium novyi SBML MML
cpe00430 Clostridium perfringens 13 SBML MML
cpf00430 Clostridium perfringens ATCC 13124 SBML MML
cpr00430 Clostridium perfringens SM101 SBML MML
cps00430 Colwellia psychrerythraea SBML MML
cpy00430 Clostridium phytofermentans SBML MML
cre00430 Chlamydomonas reinhardtii SBML MML
csa00430 Chromohalobacter salexigens SBML MML
csc00430 Caldicellulosiruptor saccharolyticus SBML MML
ctc00430 Clostridium tetani E88 SBML MML
cte00430 Chlorobaculum tepidum SBML MML
cth00430 Clostridium thermocellum SBML MML
cur00430 Corynebacterium urealyticum SBML MML
cvi00430 Chromobacterium violaceum SBML MML
cya00430 Cyanobacteria Yellowstone A-Prime SBML MML
cyb00430 Cyanobacteria Yellowstone B-Prime SBML MML
cyt00430 Cyanothece sp. ATCC 51142 SBML MML
daag00430 (Undocumented) SBML MML
dac00430 Delftia acidovorans SBML MML
dame00430 (Undocumented) SBML MML
dar00430 Dechloromonas aromatica SBML MML
dbmo00430 Bombyx mori (silkmoth) SBML MML
dcbr00430 (Undocumented) SBML MML
dcin00430 (Undocumented) SBML MML
dde00430 Desulfovibrio desulfuricans G20 SBML MML
ddi00430 Dictyostelium discoideum SBML MML
decb00430 (Undocumented) SBML MML
dfru00430 Fugu rubripes (Japanese puffer fish) SBML MML
dge00430 Deinococcus geothermalis SBML MML
dha00430 Debaryomyces hansenii SBML MML
dkwa00430 Kluyveromyces waltii SBML MML
dme00430 Drosophila melanogaster (fruit fly) SBML MML
dno00430 Dichelobacter nodosus SBML MML
dol00430 Candidatus Desulfococcus oleovorans SBML MML
dola00430 Oryzias latipes (Japanese medaka) SBML MML
dota00430 Ostreococcus tauri SBML MML
dpo00430 Drosophila pseudoobscura pseudoobscura SBML MML
dpop00430 (Undocumented) SBML MML
dps00430 Desulfotalea psychrophila SBML MML
dptm00430 (Undocumented) SBML MML
dra00430 Deinococcus radiodurans SBML MML
dre00430 Danio rerio (zebrafish) SBML MML
drm00430 Desulfotomaculum reducens SBML MML
dsba00430 Saccharomyces bayanus SBML MML
dsh00430 Dinoroseobacter shibae SBML MML
dsmi00430 Saccharomyces mikatae SBML MML
dspd00430 (Undocumented) SBML MML
dsy00430 Desulfitobacterium hafniense Y51 SBML MML
dtni00430 Tetraodon nigroviridis (green spotted puffer) SBML MML
dtps00430 (Undocumented) SBML MML
dvl00430 Desulfovibrio vulgaris DP4 SBML MML
dvu00430 Desulfovibrio vulgaris Hildenborough SBML MML
dvvi00430 (Undocumented) SBML MML
eacp00430 (Undocumented) SBML MML
eath00430 Arabidopsis thaliana (thale cress) (EST) SBML MML
eba00430 Aromatoleum aromaticum EbN1 SBML MML
ebna00430 Brassica napus (rape) (EST) SBML MML
ebvl00430 Beta vulgaris (beet) (EST) SBML MML
eca00430 Erwinia carotovora SBML MML
ecan00430 Capsicum annuum (chile pepper) (EST) SBML MML
ecc00430 Escherichia coli CFT073 (UPEC) SBML MML
ecd00430 Escherichia coli K-12 DH10B SBML MML
ece00430 Escherichia coli O157 EDL933 (EHEC) SBML MML
eci00430 Escherichia coli UTI89 (UPEC) SBML MML
ecj00430 Escherichia coli K-12 W3110 SBML MML
ecl00430 Escherichia coli ATCC 8739 SBML MML
ecm00430 Escherichia coli SECEC SBML MML
eco00430 Escherichia coli K-12 MG1655 SBML MML
ecp00430 Escherichia coli 536 (UPEC) SBML MML
ecs00430 Escherichia coli O157 Sakai (EHEC) SBML MML
ecsi00430 Citrus sinensis (Valencia orange) (EST) SBML MML
ecsv00430 Ciona savignyi (EST) SBML MML
ecv00430 Escherichia coli APEC O1 SBML MML
ecw00430 Escherichia coli E24377A SBML MML
ecx00430 Escherichia coli HS SBML MML
eees00430 Euphorbia esula (leafy spurge) (EST) SBML MML
efa00430 Enterococcus faecalis SBML MML
efar00430 Festuca arundinacea (tall fescue) (EST) SBML MML
egar00430 Gossypium arboreum (tree cotton) (EST) SBML MML
eghi00430 Gossypium hirsutum (upland cotton) (EST) SBML MML
egma00430 Glycine max (soybean) (EST) SBML MML
egra00430 Gossypium raimondii (EST) SBML MML
ehan00430 Helianthus annuus (sunflower) (EST) SBML MML
ehi00430 Entamoeba histolytica SBML MML
ehvu00430 Hordeum vulgare (barley) (EST) SBML MML
eini00430 Ipomoea nil (Japanese morning glory) (EST) SBML MML
eli00430 Erythrobacter litoralis SBML MML
elja00430 Lotus japonicus (lotus) (EST) SBML MML
elpe00430 Lactuca perennis (blue lettuce) (EST) SBML MML
elsi00430 Lactuca saligna (willow-leaf lettuce) (EST) SBML MML
elst00430 Lactuca sativa (lettuce) (EST) SBML MML
elvi00430 Lactuca virosa (wild lettuce) (EST) SBML MML
emec00430 Manihot esculenta (cassava) (EST) SBML MML
emte00430 Molgula tectiformis (EST) SBML MML
emtr00430 Medicago truncatula (barrel medic) (EST) SBML MML
enbe00430 Nicotiana benthamiana (EST) SBML MML
ent00430 Enterobacter sp. 638 SBML MML
enta00430 Nicotiana tabacum (tobacco) (EST) SBML MML
eosa00430 Oryza sativa (rice) (EST) SBML MML
eosi00430 Oryza sativa indica (Indian rice) (EST) SBML MML
eosj00430 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00430 Picea glauca (white spruce) (EST) SBML MML
epop00430 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00430 (Undocumented) SBML MML
eppi00430 Pinus pinaster (maritime pine) (EST) SBML MML
eppp00430 Physcomitrella patens subsp. patens (EST) SBML MML
epps00430 Prunus persica (peach) (EST) SBML MML
epsi00430 Picea sitchensis (sitka spruce) (EST) SBML MML
epta00430 Pinus taeda (loblolly pine) (EST) SBML MML
eptp00430 Populus tremula (European aspen) (EST) SBML MML
esa00430 Enterobacter sakazakii SBML MML
esbi00430 Sorghum bicolor (sorghum) (EST) SBML MML
esi00430 Exiguobacterium sibiricum SBML MML
esly00430 Solanum lycopersicum (tomato) (EST) SBML MML
esof00430 Saccharum officinarum (sugarcane) (EST) SBML MML
espp00430 (Undocumented) SBML MML
espu00430 Strongylocentrotus purpuratus (purple sea urchin) (EST) SBML MML
estu00430 Solanum tuberosum (potato) (EST) SBML MML
eta00430 Erwinia tasmaniensis SBML MML
etae00430 Triticum aestivum (wheat) (EST) SBML MML
evvi00430 Vitis vinifera (wine grape) (EST) SBML MML
ezel00430 (Undocumented) SBML MML
ezma00430 Zea mays (maize) (EST) SBML MML
fal00430 Frankia alni SBML MML
fgr00430 Fusarium graminearum SBML MML
fjo00430 Flavobacterium johnsoniae SBML MML
fma00430 Finegoldia magna SBML MML
fnu00430 Fusobacterium nucleatum SBML MML
fph00430 Francisella philomiragia SBML MML
fps00430 Flavobacterium psychrophilum SBML MML
fra00430 Frankia sp. CcI3 SBML MML
fre00430 Frankia sp. EAN1pec SBML MML
fta00430 Francisella tularensis subsp. holarctica FTNF002-00 SBML MML
ftf00430 Francisella tularensis subsp. tularensis FSC 198 SBML MML
fth00430 Francisella tularensis subsp. holarctica OSU18 SBML MML
ftl00430 Francisella tularensis subsp. holarctica LVS SBML MML
ftm00430 Francisella tularensis subsp. mediasiatica FSC147 SBML MML
ftn00430 Francisella tularensis subsp. novicida U112 SBML MML
ftu00430 Francisella tularensis subsp. tularensis SCHU S4 SBML MML
ftw00430 Francisella tularensis subsp. tularensis WY96-3418 SBML MML
gdi00430 Gluconacetobacter diazotrophicus PAl 5 (Brazil) SBML MML
gfo00430 Gramella forsetii SBML MML
gga00430 Gallus gallus (chicken) SBML MML
gka00430 Geobacillus kaustophilus SBML MML
glo00430 Geobacter lovleyi SBML MML
gme00430 Geobacter metallireducens SBML MML
gsu00430 Geobacter sulfurreducens SBML MML
gtn00430 Geobacillus thermodenitrificans SBML MML
gur00430 Geobacter uraniumreducens SBML MML
gvi00430 Gloeobacter violaceus SBML MML
hac00430 Helicobacter acinonychis SBML MML
har00430 Herminiimonas arsenicoxydans SBML MML
hau00430 Herpetosiphon aurantiacus SBML MML
hch00430 Hahella chejuensis SBML MML
hdu00430 Haemophilus ducreyi SBML MML
hha00430 Halorhodospira halophila SBML MML
hhe00430 Helicobacter hepaticus SBML MML
hin00430 Haemophilus influenzae Rd KW20 (serotype d) SBML MML
hip00430 Haemophilus influenzae PittEE SBML MML
hiq00430 Haemophilus influenzae PittGG SBML MML
hit00430 Haemophilus influenzae 86-028NP (nontypeable) SBML MML
hne00430 Hyphomonas neptunium SBML MML
hpa00430 Helicobacter pylori HPAG1 SBML MML
hpj00430 Helicobacter pylori J99 SBML MML
hpy00430 Helicobacter pylori 26695 SBML MML
hsa00430 Homo sapiens (human) SBML MML
hsm00430 Haemophilus somnus 2336 SBML MML
hso00430 Haemophilus somnus 129PT SBML MML
ilo00430 Idiomarina loihiensis SBML MML
jan00430 Jannaschia sp. CCS1 SBML MML
kla00430 Kluyveromyces lactis SBML MML
kpn00430 Klebsiella pneumoniae SBML MML
kra00430 Kineococcus radiotolerans SBML MML
krh00430 Kocuria rhizophila SBML MML
lac00430 Lactobacillus acidophilus SBML MML
lbc00430 Laccaria bicolor SBML MML
lbr00430 Lactobacillus brevis SBML MML
lbu00430 Lactobacillus delbrueckii ATCC BAA-365 SBML MML
lca00430 Lactobacillus casei ATCC 334 SBML MML
lch00430 Leptothrix cholodnii SBML MML
lci00430 Leuconostoc citreum SBML MML
ldb00430 Lactobacillus delbrueckii ATCC 11842 SBML MML
lfe00430 Lactobacillus fermentum SBML MML
lga00430 Lactobacillus gasseri SBML MML
lhe00430 Lactobacillus helveticus SBML MML
lin00430 Listeria innocua SBML MML
lip00430 Lawsonia intracellularis SBML MML
ljo00430 Lactobacillus johnsonii SBML MML
lla00430 Lactococcus lactis subsp. lactis IL1403 SBML MML
llc00430 Lactococcus lactis subsp. cremoris SK11 SBML MML
llm00430 Lactococcus lactis subsp. cremoris MG1363 SBML MML
lme00430 Leuconostoc mesenteroides SBML MML
lmf00430 Listeria monocytogenes F2365 SBML MML
lmo00430 Listeria monocytogenes EGD-e SBML MML
lpc00430 Legionella pneumophila Corby SBML MML
lpf00430 Legionella pneumophila Lens SBML MML
lpl00430 Lactobacillus plantarum WCFS1 SBML MML
lpn00430 Legionella pneumophila Philadelphia 1 SBML MML
lpp00430 Legionella pneumophila Paris SBML MML
lre00430 Lactobacillus reuteri DSM 20016 SBML MML
lsa00430 Lactobacillus sakei SBML MML
lsl00430 Lactobacillus salivarius SBML MML
lwe00430 Listeria welshimeri SLCC5334 SBML MML
lxx00430 Leifsonia xyli xyli CTCB07 SBML MML
maa00430 Mycoplasma agalactiae SBML MML
mab00430 Mycobacterium abscessus ATCC 19977T SBML MML
mac00430 Methanosarcina acetivorans SBML MML
mag00430 Magnetospirillum magneticum SBML MML
maq00430 Marinobacter aquaeolei SBML MML
mar00430 Microcystis aeruginosa SBML MML
mav00430 Mycobacterium avium 104 SBML MML
mba00430 Methanosarcina barkeri SBML MML
mbb00430 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbo00430 Mycobacterium bovis AF2122/97 SBML MML
mbr00430 Monosiga brevicollis SBML MML
mca00430 Methylococcus capsulatus SBML MML
mcc00430 Macaca mulatta (rhesus monkey) SBML MML
mcp00430 Mycoplasma capricolum SBML MML
mdo00430 Monodelphis domestica (opossum) SBML MML
mes00430 Mesorhizobium sp. BNC1 SBML MML
met00430 Methylobacterium sp. 4-46 SBML MML
mex00430 Methylobacterium extorquens SBML MML
mfa00430 Methylobacillus flagellatus SBML MML
mfl00430 Mesoplasma florum SBML MML
mga00430 Mycoplasma gallisepticum SBML MML
mge00430 Mycoplasma genitalium SBML MML
mgi00430 Mycobacterium gilvum SBML MML
mgl00430 Malassezia globosa SBML MML
mgr00430 Magnaporthe grisea SBML MML
mhj00430 Mycoplasma hyopneumoniae J SBML MML
mhp00430 Mycoplasma hyopneumoniae 7448 SBML MML
mhy00430 Mycoplasma hyopneumoniae 232 SBML MML
mjl00430 Mycobacterium sp. JLS SBML MML
mkm00430 Mycobacterium sp. KMS SBML MML
mlo00430 Mesorhizobium loti SBML MML
mma00430 Methanosarcina mazei SBML MML
mmc00430 Mycobacterium sp. MCS SBML MML
mmi00430 Mycobacterium marinum M SBML MML
mmo00430 Mycoplasma mobile SBML MML
mmr00430 Maricaulis maris SBML MML
mms00430 Minibacterium massiliensis SBML MML
mmu00430 Mus musculus (mouse) SBML MML
mmw00430 Marinomonas sp. MWYL1 SBML MML
mmy00430 Mycoplasma mycoides SBML MML
mpa00430 Mycobacterium avium paratuberculosis SBML MML
mpe00430 Mycoplasma penetrans SBML MML
mpu00430 Mycoplasma pulmonis SBML MML
mra00430 Mycobacterium tuberculosis H37Ra SBML MML
mrd00430 Methylobacterium radiotolerans SBML MML
msm00430 Mycobacterium smegmatis SBML MML
msu00430 Mannheimia succiniciproducens SBML MML
msy00430 Mycoplasma synoviae SBML MML
mtc00430 Mycobacterium tuberculosis CDC1551 SBML MML
mtf00430 Mycobacterium tuberculosis F11 SBML MML
mtu00430 Mycobacterium tuberculosis H37Rv SBML MML
mul00430 Mycobacterium ulcerans SBML MML
mva00430 Mycobacterium vanbaalenii SBML MML
mxa00430 Myxococcus xanthus SBML MML
nar00430 Novosphingobium aromaticivorans SBML MML
nca00430 Nocardioides sp. JS614 SBML MML
ncr00430 Neurospora crassa SBML MML
net00430 Nitrosomonas eutropha SBML MML
neu00430 Nitrosomonas europaea SBML MML
nfa00430 Nocardia farcinica SBML MML
ngo00430 Neisseria gonorrhoeae SBML MML
nha00430 Nitrobacter hamburgensis SBML MML
nma00430 Neisseria meningitidis Z2491 (serogroup A) SBML MML
nmc00430 Neisseria meningitidis FAM18 (serogroup C) SBML MML
nme00430 Neisseria meningitidis MC58 (serogroup B) SBML MML
nmn00430 Neisseria meningitidis 053442 (serogroup C) SBML MML
nmu00430 Nitrosospira multiformis SBML MML
noc00430 Nitrosococcus oceani SBML MML
npu00430 Nostoc punctiforme SBML MML
nve00430 Nematostella vectensis (sea anemone) SBML MML
nwi00430 Nitrobacter winogradskyi SBML MML
oaa00430 Ornithorhynchus anatinus (platypus) SBML MML
oan00430 Ochrobactrum anthropi SBML MML
oih00430 Oceanobacillus iheyensis SBML MML
olu00430 Ostreococcus lucimarinus SBML MML
ooe00430 Oenococcus oeni SBML MML
osa00430 Oryza sativa japonica (Japanese rice) SBML MML
ote00430 Opitutus terrae SBML MML
pae00430 Pseudomonas aeruginosa PAO1 SBML MML
pan00430 Podospora anserina SBML MML
pap00430 Pseudomonas aeruginosa PA7 SBML MML
par00430 Psychrobacter arcticum SBML MML
pat00430 Pseudoalteromonas atlantica SBML MML
pau00430 Pseudomonas aeruginosa UCBPP-PA14 SBML MML
pca00430 Pelobacter carbinolicus SBML MML
pcr00430 Psychrobacter cryohalolentis SBML MML
pcu00430 Candidatus Protochlamydia amoebophila SBML MML
pde00430 Paracoccus denitrificans SBML MML
pdi00430 Parabacteroides distasonis SBML MML
pen00430 Pseudomonas entomophila SBML MML
pfl00430 Pseudomonas fluorescens Pf-5 SBML MML
pfo00430 Pseudomonas fluorescens Pf0-1 SBML MML
pgi00430 Porphyromonas gingivalis W83 SBML MML
pgn00430 Porphyromonas gingivalis ATCC 33277 SBML MML
pha00430 Pseudoalteromonas haloplanktis SBML MML
pic00430 Pichia stipitis SBML MML
pin00430 Psychromonas ingrahamii SBML MML
pla00430 Parvibaculum lavamentivorans SBML MML
plt00430 Pelodictyon luteolum SBML MML
plu00430 Photorhabdus luminescens SBML MML
pma00430 Prochlorococcus marinus SS120 SBML MML
pmf00430 Prochlorococcus marinus MIT 9303 SBML MML
pmo00430 Petrotoga mobilis SBML MML
pmt00430 Prochlorococcus marinus MIT9313 SBML MML
pmu00430 Pasteurella multocida SBML MML
pmy00430 Pseudomonas mendocina SBML MML
pna00430 Polaromonas naphthalenivorans SBML MML
pnu00430 Polynucleobacter sp. QLW-P1DMWA-1 SBML MML
pol00430 Polaromonas sp. JS666 SBML MML
ppd00430 Pelobacter propionicus SBML MML
ppe00430 Pediococcus pentosaceus SBML MML
ppf00430 Pseudomonas putida F1 SBML MML
ppg00430 Pseudomonas putida GB-1 SBML MML
ppp00430 Physcomitrella patens subsp. patens SBML MML
ppr00430 Photobacterium profundum SBML MML
ppu00430 Pseudomonas putida KT2440 SBML MML
ppw00430 Pseudomonas putida W619 SBML MML
prw00430 Psychrobacter sp. PRwf-1 SBML MML
psa00430 Pseudomonas stutzeri SBML MML
psb00430 Pseudomonas syringae pv. syringae B728a SBML MML
psp00430 Pseudomonas syringae pv. phaseolicola 1448A SBML MML
pst00430 Pseudomonas syringae pv. tomato DC3000 SBML MML
ptr00430 Pan troglodytes (chimpanzee) SBML MML
pub00430 Candidatus Pelagibacter ubique SBML MML
rak00430 Rickettsia akari SBML MML
rba00430 Rhodopirellula baltica SBML MML
rbe00430 Rickettsia bellii RML369-C SBML MML
rbo00430 Rickettsia bellii OSU 85-389 SBML MML
rca00430 Roseiflexus castenholzii DSM13941 SBML MML
rco00430 Rickettsia conorii SBML MML
rde00430 Roseobacter denitrificans SBML MML
rec00430 Rhizobium etli CIAT 652 SBML MML
reh00430 Ralstonia eutropha H16 SBML MML
ret00430 Rhizobium etli CFN 42 SBML MML
reu00430 Ralstonia eutropha JMP134 SBML MML
rfe00430 Rickettsia felis SBML MML
rfr00430 Rhodoferax ferrireducens SBML MML
rha00430 Rhodococcus sp. RHA1 SBML MML
rle00430 Rhizobium leguminosarum SBML MML
rme00430 Ralstonia metallidurans SBML MML
rno00430 Rattus norvegicus (rat) SBML MML
rpa00430 Rhodopseudomonas palustris CGA009 SBML MML
rpb00430 Rhodopseudomonas palustris HaA2 SBML MML
rpc00430 Rhodopseudomonas palustris BisB18 SBML MML
rpd00430 Rhodopseudomonas palustris BisB5 SBML MML
rpe00430 Rhodopseudomonas palustris BisA53 SBML MML
rpr00430 Rickettsia prowazekii SBML MML
rpt00430 Rhodopseudomonas palustris TIE-1 SBML MML
rrs00430 Roseiflexus sp. RS-1 SBML MML
rru00430 Rhodospirillum rubrum SBML MML
rsa00430 Renibacterium salmoninarum SBML MML
rsh00430 Rhodobacter sphaeroides ATCC 17029 SBML MML
rso00430 Ralstonia solanacearum SBML MML
rsp00430 Rhodobacter sphaeroides 2.4.1 SBML MML
rsq00430 Rhodobacter sphaeroides ATCC 17025 SBML MML
rty00430 Rickettsia typhi SBML MML
rxy00430 Rubrobacter xylanophilus SBML MML
saa00430 Staphylococcus aureus USA300 SBML MML
sab00430 Staphylococcus aureus RF122 SBML MML
sac00430 Staphylococcus aureus COL SBML MML
sae00430 Staphylococcus aureus Newman SBML MML
sag00430 Streptococcus agalactiae 2603 (serotype V) SBML MML
sah00430 Staphylococcus aureus JH1 SBML MML
saj00430 Staphylococcus aureus JH9 SBML MML
sak00430 Streptococcus agalactiae A909 (serotype Ia) SBML MML
sal00430 Sphingopyxis alaskensis SBML MML
sam00430 Staphylococcus aureus MW2 SBML MML
san00430 Streptococcus agalactiae NEM316 (serotype III) SBML MML
sao00430 Staphylococcus aureus NCTC8325 SBML MML
saq00430 Salinispora arenicola SBML MML
sar00430 Staphylococcus aureus MRSA252 SBML MML
sas00430 Staphylococcus aureus MSSA476 SBML MML
sat00430 Syntrophus aciditrophicus SBML MML
sau00430 Staphylococcus aureus N315 SBML MML
sav00430 Staphylococcus aureus Mu50 SBML MML
saw00430 Staphylococcus aureus Mu3 SBML MML
sax00430 Staphylococcus aureus USA300 TCH1516 SBML MML
saz00430 Shewanella amazonensis SBML MML
sbc00430 Shigella boydii CDC 3083-94 SBML MML
sbl00430 Shewanella baltica OS155 SBML MML
sbm00430 Shewanella baltica OS185 SBML MML
sbn00430 Shewanella baltica OS195 SBML MML
sbo00430 Shigella boydii Sb227 SBML MML
sce00430 Saccharomyces cerevisiae SBML MML
scl00430 Sorangium cellulosum SBML MML
sco00430 Streptomyces coelicolor SBML MML
sdn00430 Shewanella denitrificans SBML MML
sdy00430 Shigella dysenteriae SBML MML
sec00430 Salmonella enterica subsp. enterica serovar Choleraesuis SBML MML
sen00430 Saccharopolyspora erythraea SBML MML
sep00430 Staphylococcus epidermidis ATCC 12228 SBML MML
ser00430 Staphylococcus epidermidis RP62A SBML MML
ses00430 Salmonella enterica subsp. arizonae SBML MML
sfl00430 Shigella flexneri 301 (serotype 2a) SBML MML
sfr00430 Shewanella frigidimarina SBML MML
sfu00430 Syntrophobacter fumaroxidans SBML MML
sfv00430 Shigella flexneri 8401 (serotype 5b) SBML MML
sfx00430 Shigella flexneri 2457T (serotype 2a) SBML MML
sgl00430 Sodalis glossinidius SBML MML
sgo00430 Streptococcus gordonii SBML MML
sgr00430 Streptomyces griseus SBML MML
sha00430 Staphylococcus haemolyticus SBML MML
she00430 Shewanella sp. MR-4 SBML MML
shl00430 Shewanella halifaxensis SBML MML
shm00430 Shewanella sp. MR-7 SBML MML
shn00430 Shewanella sp. ANA-3 SBML MML
shw00430 Shewanella sp. W3-18-1 SBML MML
sil00430 Ruegeria pomeroyi SBML MML
sit00430 Silicibacter sp. TM1040 SBML MML
slo00430 Shewanella loihica SBML MML
sma00430 Streptomyces avermitilis SBML MML
smd00430 Sinorhizobium medicae SBML MML
sme00430 Sinorhizobium meliloti SBML MML
smu00430 Streptococcus mutans SBML MML
son00430 Shewanella oneidensis SBML MML
spa00430 Streptococcus pyogenes MGAS10394 (serotype M6) SBML MML
spb00430 Streptococcus pyogenes MGAS6180 (serotype M28) SBML MML
spc00430 Shewanella putrefaciens SBML MML
spd00430 Streptococcus pneumoniae D39 SBML MML
spe00430 Serratia proteamaculans SBML MML
spf00430 Streptococcus pyogenes Manfredo (serotype M5) SBML MML
spg00430 Streptococcus pyogenes MGAS315 (serotype M3) SBML MML
sph00430 Streptococcus pyogenes MGAS10270 (serotype M2) SBML MML
spi00430 Streptococcus pyogenes MGAS10750 (serotype M4) SBML MML
spj00430 Streptococcus pyogenes MGAS2096 (serotype M12) SBML MML
spk00430 Streptococcus pyogenes MGAS9429 (serotype M12) SBML MML
spl00430 Shewanella pealeana SBML MML
spm00430 Streptococcus pyogenes MGAS8232 (serotype M18) SBML MML
spn00430 Streptococcus pneumoniae TIGR4 SBML MML
spq00430 Salmonella enterica subsp. enterica serovar Paratyphi B SBML MML
spr00430 Streptococcus pneumoniae R6 SBML MML
sps00430 Streptococcus pyogenes SSI-1 (serotype M3) SBML MML
spt00430 Salmonella enterica subsp. enterica serovar Paratyphi A SBML MML
spu00430 Strongylocentrotus purpuratus (purple sea urchin) SBML MML
spv00430 Streptococcus pneumoniae Hungary19A 6 SBML MML
spw00430 Streptococcus pneumoniae CGSP14 (serotype 14) SBML MML
spy00430 Streptococcus pyogenes SF370 (serotype M1) SBML MML
spz00430 Streptococcus pyogenes MGAS5005 (serotype M1) SBML MML
sru00430 Salinibacter ruber SBML MML
ssa00430 Streptococcus sanguinis SBML MML
ssc00430 Sus scrofa (pig) SBML MML
sse00430 Shewanella sediminis SBML MML
ssn00430 Shigella sonnei SBML MML
ssp00430 Staphylococcus saprophyticus SBML MML
ssu00430 Streptococcus suis 05ZYH33 SBML MML
ssv00430 Streptococcus suis 98HAH33 SBML MML
stc00430 Streptococcus thermophilus CNRZ1066 SBML MML
ste00430 Streptococcus thermophilus LMD-9 SBML MML
sth00430 Symbiobacterium thermophilum SBML MML
stl00430 Streptococcus thermophilus LMG18311 SBML MML
stm00430 Salmonella typhimurium LT2 SBML MML
stp00430 Salinispora tropica SBML MML
stt00430 Salmonella enterica subsp. enterica serovar Typhi Ty2 SBML MML
sty00430 Salmonella enterica subsp. enterica serovar Typhi CT18 SBML MML
sun00430 Sulfurovum sp. NBC37-1 SBML MML
sus00430 Solibacter usitatus SBML MML
swd00430 Shewanella woodyi ATCC 51908 SBML MML
swi00430 Sphingomonas wittichii SBML MML
swo00430 Syntrophomonas wolfei SBML MML
syc00430 Synechococcus elongatus PCC6301 SBML MML
syd00430 Synechococcus sp. CC9605 SBML MML
syf00430 Synechococcus elongatus PCC7942 SBML MML
syg00430 Synechococcus sp. CC9311 SBML MML
syn00430 Synechocystis sp. PCC6803 SBML MML
syp00430 Synechococcus sp. PCC7002 SBML MML
syr00430 Synechococcus sp. RCC307 SBML MML
syw00430 Synechococcus sp. WH8102 SBML MML
syx00430 Synechococcus sp. WH7803 SBML MML
tbd00430 Thiobacillus denitrificans SBML MML
tca00430 Tribolium castaneum (red flour beetle) SBML MML
tde00430 Treponema denticola SBML MML
tdn00430 Thiomicrospira denitrificans SBML MML
tel00430 Thermosynechococcus elongatus SBML MML
ter00430 Trichodesmium erythraeum SBML MML
tet00430 Tetrahymena thermophila SBML MML
tex00430 Thermoanaerobacter sp. X514 SBML MML
tfu00430 Thermobifida fusca SBML MML
tle00430 Thermotoga lettingae SBML MML
tma00430 Thermotoga maritima SBML MML
tpd00430 Thermoanaerobacter pseudethanolicus SBML MML
tpp00430 Treponema pallidum subsp. pallidum SS14 SBML MML
tpt00430 Thermotoga petrophila SBML MML
trq00430 Thermotoga sp. RQ2 SBML MML
tte00430 Thermoanaerobacter tengcongensis SBML MML
tth00430 Thermus thermophilus HB27 SBML MML
ttj00430 Thermus thermophilus HB8 SBML MML
uma00430 Ustilago maydis SBML MML
upa00430 Ureaplasma parvum serovar 3 ATCC 27815 SBML MML
uur00430 Ureaplasma parvum serovar 3 ATCC 700970 SBML MML
vch00430 Vibrio cholerae O1 SBML MML
vco00430 Vibrio cholerae O395 SBML MML
vei00430 Verminephrobacter eiseniae SBML MML
vfi00430 Vibrio fischeri SBML MML
vha00430 Vibrio harveyi SBML MML
vpa00430 Vibrio parahaemolyticus SBML MML
vvu00430 Vibrio vulnificus CMCP6 SBML MML
vvy00430 Vibrio vulnificus YJ016 SBML MML
wbr00430 Wigglesworthia glossinidia SBML MML
xac00430 Xanthomonas axonopodis SBML MML
xau00430 Xanthobacter autotrophicus SBML MML
xcb00430 Xanthomonas campestris pv. campestris 8004 SBML MML
xcc00430 Xanthomonas campestris pv. campestris ATCC 33913 SBML MML
xcv00430 Xanthomonas campestris pv. vesicatoria SBML MML
xla00430 Xenopus laevis (African clawed frog) SBML MML
xom00430 Xanthomonas oryzae MAFF311018 SBML MML
xoo00430 Xanthomonas oryzae KACC10331 SBML MML
xtr00430 Xenopus tropicalis (western clawed frog) SBML MML
yen00430 Yersinia enterocolitica SBML MML
yli00430 Yarrowia lipolytica SBML MML
ypa00430 Yersinia pestis Antiqua SBML MML
ype00430 Yersinia pestis CO92 SBML MML
ypg00430 Yersinia pestis Angola SBML MML
ypi00430 Yersinia pseudotuberculosis IP31758 SBML MML
ypk00430 Yersinia pestis KIM SBML MML
ypm00430 Yersinia pestis Mediaevails SBML MML
ypn00430 Yersinia pestis Nepal516 SBML MML
ypp00430 Yersinia pestis Pestoides SBML MML
yps00430 Yersinia pseudotuberculosis IP32953 SBML MML
ypy00430 Yersinia pseudotuberculosis YPIII SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.