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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00410: beta-Alanine metabolism

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aae00410 Aquifex aeolicus SBML MML
aau00410 Arthrobacter aurescens SBML MML
aav00410 Acidovorax avenae SBML MML
aba00410 Acidobacteria bacterium SBML MML
abc00410 Acinetobacter baumannii ACICU SBML MML
abm00410 Acinetobacter baumannii SDF SBML MML
abo00410 Alcanivorax borkumensis SBML MML
abu00410 Arcobacter butzleri SBML MML
aby00410 Acinetobacter baumannii AYE SBML MML
acb00410 Acinetobacter baumannii ATCC 17978 SBML MML
ace00410 Acidothermus cellulolyticus SBML MML
aci00410 Acinetobacter sp. ADP1 SBML MML
acr00410 Acidiphilium cryptum JF-5 SBML MML
ade00410 Anaeromyxobacter dehalogenans 2CP-C SBML MML
aeh00410 Alkalilimnicola ehrlichei SBML MML
afm00410 Aspergillus fumigatus SBML MML
afu00410 Archaeoglobus fulgidus SBML MML
afw00410 Anaeromyxobacter sp. Fw109-5 SBML MML
aga00410 Anopheles gambiae (mosquito) SBML MML
ago00410 Ashbya gossypii (Eremothecium gossypii) SBML MML
aha00410 Aeromonas hydrophila SBML MML
ajs00410 Acidovorax sp. JS42 SBML MML
amr00410 Acaryochloris marina SBML MML
amt00410 Alkaliphilus metalliredigens SBML MML
ana00410 Anabaena sp. PCC7120 SBML MML
ang00410 Aspergillus niger SBML MML
ani00410 Aspergillus nidulans SBML MML
aoe00410 Alkaliphilus oremlandii SBML MML
aor00410 Aspergillus oryzae SBML MML
apa00410 Actinobacillus pleuropneumoniae AP76 (serotype 7) SBML MML
ape00410 Aeropyrum pernix SBML MML
apj00410 Actinobacillus pleuropneumoniae JL03 (serotype 3) SBML MML
apl00410 Actinobacillus pleuropneumoniae L20 (serotype 5b) SBML MML
art00410 Arthrobacter sp. FB24 SBML MML
asa00410 Aeromonas salmonicida SBML MML
asu00410 Actinobacillus succinogenes SBML MML
atc00410 Agrobacterium tumefaciens C58 (Cereon) SBML MML
ath00410 Arabidopsis thaliana (thale cress) SBML MML
atu00410 Agrobacterium tumefaciens C58 SBML MML
ava00410 Anabaena variabilis SBML MML
azc00410 Azorhizobium caulinodans SBML MML
azo00410 Azoarcus sp. BH72 SBML MML
baa00410 Bacillus anthracis A2012 SBML MML
bac00410 Burkholderia ambifaria MC40-6 SBML MML
bam00410 Burkholderia cepacia SBML MML
ban00410 Bacillus anthracis Ames SBML MML
bar00410 Bacillus anthracis Ames 0581 SBML MML
bas00410 Buchnera aphidicola Sg SBML MML
bat00410 Bacillus anthracis Sterne SBML MML
bav00410 Bordetella avium SBML MML
bay00410 Bacillus amyloliquefaciens SBML MML
bba00410 Bdellovibrio bacteriovorus SBML MML
bbk00410 Bartonella bacilliformis SBML MML
bbr00410 Bordetella bronchiseptica SBML MML
bbt00410 Bradyrhizobium sp. BTAi1 SBML MML
bca00410 Bacillus cereus ATCC 10987 SBML MML
bce00410 Bacillus cereus ATCC 14579 SBML MML
bch00410 Burkholderia cenocepacia HI2424 SBML MML
bcl00410 Bacillus clausii SBML MML
bcm00410 Burkholderia cenocepacia MC0-3 SBML MML
bcn00410 Burkholderia cenocepacia AU1054 SBML MML
bcs00410 Brucella canis SBML MML
bcy00410 Bacillus cytotoxis NVH 391-98 SBML MML
bcz00410 Bacillus cereus ZK SBML MML
bfr00410 Bacteroides fragilis YCH46 SBML MML
bfs00410 Bacteroides fragilis NCTC9343 SBML MML
bha00410 Bacillus halodurans SBML MML
bhe00410 Bartonella henselae SBML MML
bid00410 Beijerinckia indica SBML MML
bja00410 Bradyrhizobium japonicum SBML MML
bld00410 Bacillus licheniformis DSM13 SBML MML
bli00410 Bacillus licheniformis ATCC 14580 SBML MML
blj00410 Bifidobacterium longum DJO10A SBML MML
bma00410 Burkholderia mallei ATCC 23344 SBML MML
bmb00410 Brucella abortus 9-941 SBML MML
bmc00410 Brucella abortus S19 SBML MML
bme00410 Brucella melitensis 16M SBML MML
bmf00410 Brucella melitensis biovar Abortus SBML MML
bml00410 Burkholderia mallei NCTC 10229 SBML MML
bmn00410 Burkholderia mallei NCTC 10247 SBML MML
bms00410 Brucella suis 1330 SBML MML
bmt00410 Brucella suis ATCC 23445 SBML MML
bmu00410 Burkholderia multivorans ATCC 17616 (JGI) SBML MML
bmv00410 Burkholderia mallei SAVP1 SBML MML
bmy00410 Brugia malayi (filaria) SBML MML
bov00410 Brucella ovis SBML MML
bpa00410 Bordetella parapertussis SBML MML
bpd00410 Burkholderia pseudomallei 668 SBML MML
bpe00410 Bordetella pertussis SBML MML
bph00410 Burkholderia phymatum SBML MML
bpl00410 Burkholderia pseudomallei 1106a SBML MML
bpm00410 Burkholderia pseudomallei 1710b SBML MML
bps00410 Burkholderia pseudomallei K96243 SBML MML
bpt00410 Bordetella petrii SBML MML
bpu00410 Bacillus pumilus SBML MML
bqu00410 Bartonella quintana SBML MML
bra00410 Bradyrhizobium sp. ORS278 SBML MML
bsu00410 Bacillus subtilis SBML MML
bta00410 Bos taurus (cow) SBML MML
bte00410 Burkholderia thailandensis SBML MML
bth00410 Bacteroides thetaiotaomicron SBML MML
btk00410 Bacillus thuringiensis 97-27 SBML MML
btl00410 Bacillus thuringiensis Al Hakam SBML MML
btr00410 Bartonella tribocorum SBML MML
buc00410 Buchnera aphidicola APS SBML MML
bur00410 Burkholderia sp. 383 SBML MML
bvi00410 Burkholderia vietnamiensis SBML MML
bvu00410 Bacteroides vulgatus SBML MML
bwe00410 Bacillus weihenstephanensis SBML MML
bxe00410 Burkholderia xenovorans SBML MML
cac00410 Clostridium acetobutylicum SBML MML
cak00410 Caulobacter sp. K31 SBML MML
cau00410 Chloroflexus aurantiacus SBML MML
cba00410 Clostridium botulinum A ATCC 19397 SBML MML
cbb00410 Clostridium botulinum B1 Okra SBML MML
cbd00410 Coxiella burnetii Dugway 5J108-111 SBML MML
cbe00410 Clostridium beijerinckii SBML MML
cbf00410 Clostridium botulinum F Langeland SBML MML
cbh00410 Clostridium botulinum A Hall SBML MML
cbk00410 Clostridium botulinum B Eklund 17B SBML MML
cbl00410 Clostridium botulinum A3 Loch Maree SBML MML
cbo00410 Clostridium botulinum A ATCC 3502 SBML MML
cbs00410 Coxiella burnetii RSA 331 SBML MML
cbu00410 Coxiella burnetii RSA 493 SBML MML
cch00410 Chlorobium chlorochromatii SBML MML
cco00410 Campylobacter concisus 13826 SBML MML
ccr00410 Caulobacter crescentus CB15 SBML MML
ccv00410 Campylobacter curvus SBML MML
cdf00410 Clostridium difficile SBML MML
cdi00410 Corynebacterium diphtheriae SBML MML
cef00410 Corynebacterium efficiens SBML MML
cel00410 Caenorhabditis elegans (nematode) SBML MML
cfa00410 Canis familiaris (dog) SBML MML
cff00410 Campylobacter fetus SBML MML
cgb00410 Corynebacterium glutamicum ATCC 13032 (Bielefeld) SBML MML
cgl00410 Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) SBML MML
cgr00410 Candida glabrata SBML MML
cgt00410 Corynebacterium glutamicum R SBML MML
cha00410 Campylobacter hominis ATCC BAA-381 SBML MML
chu00410 Cytophaga hutchinsonii SBML MML
chy00410 Carboxydothermus hydrogenoformans SBML MML
cja00410 Cellvibrio japonicus SBML MML
cjd00410 Campylobacter jejuni subsp. doylei 269.97 SBML MML
cje00410 Campylobacter jejuni NCTC11168 SBML MML
cjj00410 Campylobacter jejuni 81-176 SBML MML
cjk00410 Corynebacterium jeikeium SBML MML
cjr00410 Campylobacter jejuni RM1221 SBML MML
cju00410 Campylobacter jejuni 81116 SBML MML
ckl00410 Clostridium kluyveri DSM 555 SBML MML
cko00410 Citrobacter koseri ATCC BAA-895 SBML MML
cma00410 Caldivirga maquilingensis SBML MML
cme00410 Cyanidioschyzon merolae SBML MML
cmi00410 Clavibacter michiganensis subsp. michiganensis SBML MML
cms00410 Clavibacter michiganensis subsp. sepedonicus SBML MML
cnb00410 Cryptococcus neoformans B-3501A SBML MML
cne00410 Cryptococcus neoformans JEC21 SBML MML
cno00410 Clostridium novyi SBML MML
cpb00410 Chlorobium phaeobacteroides BS1 SBML MML
cpe00410 Clostridium perfringens 13 SBML MML
cpf00410 Clostridium perfringens ATCC 13124 SBML MML
cph00410 Chlorobium phaeobacteroides DSM 266 SBML MML
cpr00410 Clostridium perfringens SM101 SBML MML
cps00410 Colwellia psychrerythraea SBML MML
cpy00410 Clostridium phytofermentans SBML MML
cre00410 Chlamydomonas reinhardtii SBML MML
csa00410 Chromohalobacter salexigens SBML MML
csc00410 Caldicellulosiruptor saccharolyticus SBML MML
ctc00410 Clostridium tetani E88 SBML MML
cte00410 Chlorobaculum tepidum SBML MML
cth00410 Clostridium thermocellum SBML MML
cti00410 Cupriavidus taiwanensis SBML MML
cur00410 Corynebacterium urealyticum SBML MML
cvi00410 Chromobacterium violaceum SBML MML
cya00410 Cyanobacteria Yellowstone A-Prime SBML MML
cyb00410 Cyanobacteria Yellowstone B-Prime SBML MML
cyt00410 Cyanothece sp. ATCC 51142 SBML MML
daag00410 (Undocumented) SBML MML
dac00410 Delftia acidovorans SBML MML
dame00410 (Undocumented) SBML MML
dar00410 Dechloromonas aromatica SBML MML
dau00410 Candidatus Desulforudis audaxviator SBML MML
dbmo00410 Bombyx mori (silkmoth) SBML MML
dcbr00410 (Undocumented) SBML MML
dcin00410 (Undocumented) SBML MML
dde00410 Desulfovibrio desulfuricans G20 SBML MML
ddi00410 Dictyostelium discoideum SBML MML
deb00410 Dehalococcoides sp. BAV1 SBML MML
decb00410 (Undocumented) SBML MML
deh00410 Dehalococcoides sp. CBDB1 SBML MML
det00410 Dehalococcoides ethenogenes SBML MML
dfru00410 Fugu rubripes (Japanese puffer fish) SBML MML
dge00410 Deinococcus geothermalis SBML MML
dha00410 Debaryomyces hansenii SBML MML
dkwa00410 Kluyveromyces waltii SBML MML
dme00410 Drosophila melanogaster (fruit fly) SBML MML
dol00410 Candidatus Desulfococcus oleovorans SBML MML
dola00410 Oryzias latipes (Japanese medaka) SBML MML
dota00410 Ostreococcus tauri SBML MML
dpkn00410 (Undocumented) SBML MML
dpo00410 Drosophila pseudoobscura pseudoobscura SBML MML
dpop00410 (Undocumented) SBML MML
dps00410 Desulfotalea psychrophila SBML MML
dptm00410 (Undocumented) SBML MML
dra00410 Deinococcus radiodurans SBML MML
dre00410 Danio rerio (zebrafish) SBML MML
drm00410 Desulfotomaculum reducens SBML MML
dsba00410 Saccharomyces bayanus SBML MML
dsh00410 Dinoroseobacter shibae SBML MML
dsmi00410 Saccharomyces mikatae SBML MML
dspd00410 (Undocumented) SBML MML
dsy00410 Desulfitobacterium hafniense Y51 SBML MML
dtni00410 Tetraodon nigroviridis (green spotted puffer) SBML MML
dtps00410 (Undocumented) SBML MML
dvvi00410 (Undocumented) SBML MML
eacp00410 (Undocumented) SBML MML
eath00410 Arabidopsis thaliana (thale cress) (EST) SBML MML
eba00410 Aromatoleum aromaticum EbN1 SBML MML
ebna00410 Brassica napus (rape) (EST) SBML MML
ebvl00410 Beta vulgaris (beet) (EST) SBML MML
eca00410 Erwinia carotovora SBML MML
ecan00410 Capsicum annuum (chile pepper) (EST) SBML MML
ecc00410 Escherichia coli CFT073 (UPEC) SBML MML
ecd00410 Escherichia coli K-12 DH10B SBML MML
ece00410 Escherichia coli O157 EDL933 (EHEC) SBML MML
eci00410 Escherichia coli UTI89 (UPEC) SBML MML
ecj00410 Escherichia coli K-12 W3110 SBML MML
ecl00410 Escherichia coli ATCC 8739 SBML MML
ecm00410 Escherichia coli SECEC SBML MML
eco00410 Escherichia coli K-12 MG1655 SBML MML
ecp00410 Escherichia coli 536 (UPEC) SBML MML
ecs00410 Escherichia coli O157 Sakai (EHEC) SBML MML
ecsi00410 Citrus sinensis (Valencia orange) (EST) SBML MML
ecsv00410 Ciona savignyi (EST) SBML MML
ecv00410 Escherichia coli APEC O1 SBML MML
ecw00410 Escherichia coli E24377A SBML MML
ecx00410 Escherichia coli HS SBML MML
eees00410 Euphorbia esula (leafy spurge) (EST) SBML MML
efa00410 Enterococcus faecalis SBML MML
efar00410 Festuca arundinacea (tall fescue) (EST) SBML MML
egar00410 Gossypium arboreum (tree cotton) (EST) SBML MML
eghi00410 Gossypium hirsutum (upland cotton) (EST) SBML MML
egma00410 Glycine max (soybean) (EST) SBML MML
egra00410 Gossypium raimondii (EST) SBML MML
ehan00410 Helianthus annuus (sunflower) (EST) SBML MML
ehi00410 Entamoeba histolytica SBML MML
ehvu00410 Hordeum vulgare (barley) (EST) SBML MML
eini00410 Ipomoea nil (Japanese morning glory) (EST) SBML MML
eli00410 Erythrobacter litoralis SBML MML
elja00410 Lotus japonicus (lotus) (EST) SBML MML
elpe00410 Lactuca perennis (blue lettuce) (EST) SBML MML
elsi00410 Lactuca saligna (willow-leaf lettuce) (EST) SBML MML
elst00410 Lactuca sativa (lettuce) (EST) SBML MML
elvi00410 Lactuca virosa (wild lettuce) (EST) SBML MML
emec00410 Manihot esculenta (cassava) (EST) SBML MML
emte00410 Molgula tectiformis (EST) SBML MML
emtr00410 Medicago truncatula (barrel medic) (EST) SBML MML
enbe00410 Nicotiana benthamiana (EST) SBML MML
ent00410 Enterobacter sp. 638 SBML MML
enta00410 Nicotiana tabacum (tobacco) (EST) SBML MML
eosa00410 Oryza sativa (rice) (EST) SBML MML
eosi00410 Oryza sativa indica (Indian rice) (EST) SBML MML
eosj00410 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00410 Picea glauca (white spruce) (EST) SBML MML
epop00410 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00410 (Undocumented) SBML MML
eppi00410 Pinus pinaster (maritime pine) (EST) SBML MML
eppp00410 Physcomitrella patens subsp. patens (EST) SBML MML
epps00410 Prunus persica (peach) (EST) SBML MML
epsi00410 Picea sitchensis (sitka spruce) (EST) SBML MML
epta00410 Pinus taeda (loblolly pine) (EST) SBML MML
eptp00410 Populus tremula (European aspen) (EST) SBML MML
esa00410 Enterobacter sakazakii SBML MML
esbi00410 Sorghum bicolor (sorghum) (EST) SBML MML
esi00410 Exiguobacterium sibiricum SBML MML
esja00410 Schistosoma japonicum (fluke) (EST) SBML MML
esly00410 Solanum lycopersicum (tomato) (EST) SBML MML
esof00410 Saccharum officinarum (sugarcane) (EST) SBML MML
espp00410 (Undocumented) SBML MML
espu00410 Strongylocentrotus purpuratus (purple sea urchin) (EST) SBML MML
estu00410 Solanum tuberosum (potato) (EST) SBML MML
eta00410 Erwinia tasmaniensis SBML MML
etae00410 Triticum aestivum (wheat) (EST) SBML MML
evvi00410 Vitis vinifera (wine grape) (EST) SBML MML
ezel00410 (Undocumented) SBML MML
ezma00410 Zea mays (maize) (EST) SBML MML
fal00410 Frankia alni SBML MML
fgr00410 Fusarium graminearum SBML MML
fjo00410 Flavobacterium johnsoniae SBML MML
fma00410 Finegoldia magna SBML MML
fno00410 Fervidobacterium nodosum SBML MML
fnu00410 Fusobacterium nucleatum SBML MML
fph00410 Francisella philomiragia SBML MML
fps00410 Flavobacterium psychrophilum SBML MML
fra00410 Frankia sp. CcI3 SBML MML
fre00410 Frankia sp. EAN1pec SBML MML
fta00410 Francisella tularensis subsp. holarctica FTNF002-00 SBML MML
ftf00410 Francisella tularensis subsp. tularensis FSC 198 SBML MML
fth00410 Francisella tularensis subsp. holarctica OSU18 SBML MML
ftl00410 Francisella tularensis subsp. holarctica LVS SBML MML
ftm00410 Francisella tularensis subsp. mediasiatica FSC147 SBML MML
ftn00410 Francisella tularensis subsp. novicida U112 SBML MML
ftu00410 Francisella tularensis subsp. tularensis SCHU S4 SBML MML
ftw00410 Francisella tularensis subsp. tularensis WY96-3418 SBML MML
gbe00410 Granulobacter bethesdensis SBML MML
gdi00410 Gluconacetobacter diazotrophicus PAl 5 (Brazil) SBML MML
gfo00410 Gramella forsetii SBML MML
gga00410 Gallus gallus (chicken) SBML MML
gka00410 Geobacillus kaustophilus SBML MML
glo00410 Geobacter lovleyi SBML MML
gme00410 Geobacter metallireducens SBML MML
gox00410 Gluconobacter oxydans SBML MML
gsu00410 Geobacter sulfurreducens SBML MML
gur00410 Geobacter uraniumreducens SBML MML
gvi00410 Gloeobacter violaceus SBML MML
hac00410 Helicobacter acinonychis SBML MML
hal00410 Halobacterium sp. NRC-1 SBML MML
har00410 Herminiimonas arsenicoxydans SBML MML
hau00410 Herpetosiphon aurantiacus SBML MML
hbu00410 Hyperthermus butylicus SBML MML
hch00410 Hahella chejuensis SBML MML
hha00410 Halorhodospira halophila SBML MML
hhe00410 Helicobacter hepaticus SBML MML
hiq00410 Haemophilus influenzae PittGG SBML MML
hma00410 Haloarcula marismortui SBML MML
hmo00410 Heliobacterium modesticaldum SBML MML
hne00410 Hyphomonas neptunium SBML MML
hpa00410 Helicobacter pylori HPAG1 SBML MML
hpj00410 Helicobacter pylori J99 SBML MML
hpy00410 Helicobacter pylori 26695 SBML MML
hsa00410 Homo sapiens (human) SBML MML
hsl00410 Halobacterium salinarum R1 SBML MML
hwa00410 Haloquadratum walsbyi SBML MML
ilo00410 Idiomarina loihiensis SBML MML
jan00410 Jannaschia sp. CCS1 SBML MML
kcr00410 Candidatus Korarchaeum cryptofilum SBML MML
kla00410 Kluyveromyces lactis SBML MML
kpn00410 Klebsiella pneumoniae SBML MML
kra00410 Kineococcus radiotolerans SBML MML
krh00410 Kocuria rhizophila SBML MML
lbc00410 Laccaria bicolor SBML MML
lbf00410 Leptospira biflexa serovar Patoc Patoc 1 (Ames) SBML MML
lbi00410 Leptospira biflexa serovar Patoc Patoc 1 (Paris) SBML MML
lbj00410 Leptospira borgpetersenii JB197 SBML MML
lbl00410 Leptospira borgpetersenii L550 SBML MML
lbr00410 Lactobacillus brevis SBML MML
lch00410 Leptothrix cholodnii SBML MML
lic00410 Leptospira interrogans serovar Copenhageni SBML MML
lil00410 Leptospira interrogans serovar lai SBML MML
lin00410 Listeria innocua SBML MML
lma00410 Leishmania major SBML MML
lme00410 Leuconostoc mesenteroides SBML MML
lmf00410 Listeria monocytogenes F2365 SBML MML
lmo00410 Listeria monocytogenes EGD-e SBML MML
lpc00410 Legionella pneumophila Corby SBML MML
lpf00410 Legionella pneumophila Lens SBML MML
lpl00410 Lactobacillus plantarum WCFS1 SBML MML
lpn00410 Legionella pneumophila Philadelphia 1 SBML MML
lpp00410 Legionella pneumophila Paris SBML MML
lre00410 Lactobacillus reuteri DSM 20016 SBML MML
lsp00410 Lysinibacillus sphaericus SBML MML
lwe00410 Listeria welshimeri SLCC5334 SBML MML
lxx00410 Leifsonia xyli xyli CTCB07 SBML MML
mab00410 Mycobacterium abscessus ATCC 19977T SBML MML
mac00410 Methanosarcina acetivorans SBML MML
mag00410 Magnetospirillum magneticum SBML MML
maq00410 Marinobacter aquaeolei SBML MML
mar00410 Microcystis aeruginosa SBML MML
mav00410 Mycobacterium avium 104 SBML MML
mba00410 Methanosarcina barkeri SBML MML
mbb00410 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbo00410 Mycobacterium bovis AF2122/97 SBML MML
mbr00410 Monosiga brevicollis SBML MML
mca00410 Methylococcus capsulatus SBML MML
mcc00410 Macaca mulatta (rhesus monkey) SBML MML
mdo00410 Monodelphis domestica (opossum) SBML MML
mes00410 Mesorhizobium sp. BNC1 SBML MML
met00410 Methylobacterium sp. 4-46 SBML MML
mex00410 Methylobacterium extorquens SBML MML
mfa00410 Methylobacillus flagellatus SBML MML
mgi00410 Mycobacterium gilvum SBML MML
mgl00410 Malassezia globosa SBML MML
mgm00410 Magnetococcus sp. MC-1 SBML MML
mgr00410 Magnaporthe grisea SBML MML
mjl00410 Mycobacterium sp. JLS SBML MML
mkm00410 Mycobacterium sp. KMS SBML MML
mle00410 Mycobacterium leprae TN SBML MML
mlo00410 Mesorhizobium loti SBML MML
mma00410 Methanosarcina mazei SBML MML
mmc00410 Mycobacterium sp. MCS SBML MML
mmi00410 Mycobacterium marinum M SBML MML
mmr00410 Maricaulis maris SBML MML
mms00410 Minibacterium massiliensis SBML MML
mmu00410 Mus musculus (mouse) SBML MML
mmw00410 Marinomonas sp. MWYL1 SBML MML
mpa00410 Mycobacterium avium paratuberculosis SBML MML
mpt00410 Methylibium petroleiphilum SBML MML
mra00410 Mycobacterium tuberculosis H37Ra SBML MML
mrd00410 Methylobacterium radiotolerans SBML MML
mse00410 Metallosphaera sedula SBML MML
msm00410 Mycobacterium smegmatis SBML MML
msu00410 Mannheimia succiniciproducens SBML MML
mta00410 Moorella thermoacetica SBML MML
mtc00410 Mycobacterium tuberculosis CDC1551 SBML MML
mtf00410 Mycobacterium tuberculosis F11 SBML MML
mtu00410 Mycobacterium tuberculosis H37Rv SBML MML
mul00410 Mycobacterium ulcerans SBML MML
mva00410 Mycobacterium vanbaalenii SBML MML
mxa00410 Myxococcus xanthus SBML MML
nar00410 Novosphingobium aromaticivorans SBML MML
nca00410 Nocardioides sp. JS614 SBML MML
ncr00410 Neurospora crassa SBML MML
net00410 Nitrosomonas eutropha SBML MML
neu00410 Nitrosomonas europaea SBML MML
nfa00410 Nocardia farcinica SBML MML
ngo00410 Neisseria gonorrhoeae SBML MML
nha00410 Nitrobacter hamburgensis SBML MML
nis00410 Nitratiruptor sp. SB155-2 SBML MML
nma00410 Neisseria meningitidis Z2491 (serogroup A) SBML MML
nmc00410 Neisseria meningitidis FAM18 (serogroup C) SBML MML
nme00410 Neisseria meningitidis MC58 (serogroup B) SBML MML
nmn00410 Neisseria meningitidis 053442 (serogroup C) SBML MML
nmu00410 Nitrosospira multiformis SBML MML
noc00410 Nitrosococcus oceani SBML MML
nph00410 Natronomonas pharaonis SBML MML
npu00410 Nostoc punctiforme SBML MML
nve00410 Nematostella vectensis (sea anemone) SBML MML
nwi00410 Nitrobacter winogradskyi SBML MML
oaa00410 Ornithorhynchus anatinus (platypus) SBML MML
oan00410 Ochrobactrum anthropi SBML MML
oih00410 Oceanobacillus iheyensis SBML MML
olu00410 Ostreococcus lucimarinus SBML MML
osa00410 Oryza sativa japonica (Japanese rice) SBML MML
ote00410 Opitutus terrae SBML MML
pab00410 Pyrococcus abyssi SBML MML
pae00410 Pseudomonas aeruginosa PAO1 SBML MML
pai00410 Pyrobaculum aerophilum SBML MML
pan00410 Podospora anserina SBML MML
pap00410 Pseudomonas aeruginosa PA7 SBML MML
par00410 Psychrobacter arcticum SBML MML
pas00410 Pyrobaculum arsenaticum SBML MML
pat00410 Pseudoalteromonas atlantica SBML MML
pau00410 Pseudomonas aeruginosa UCBPP-PA14 SBML MML
pca00410 Pelobacter carbinolicus SBML MML
pcl00410 Pyrobaculum calidifontis SBML MML
pcr00410 Psychrobacter cryohalolentis SBML MML
pde00410 Paracoccus denitrificans SBML MML
pdi00410 Parabacteroides distasonis SBML MML
pen00410 Pseudomonas entomophila SBML MML
pfa00410 Plasmodium falciparum 3D7 SBML MML
pfl00410 Pseudomonas fluorescens Pf-5 SBML MML
pfo00410 Pseudomonas fluorescens Pf0-1 SBML MML
pfu00410 Pyrococcus furiosus SBML MML
pgi00410 Porphyromonas gingivalis W83 SBML MML
pgn00410 Porphyromonas gingivalis ATCC 33277 SBML MML
pha00410 Pseudoalteromonas haloplanktis SBML MML
pho00410 Pyrococcus horikoshii SBML MML
pic00410 Pichia stipitis SBML MML
pin00410 Psychromonas ingrahamii SBML MML
pis00410 Pyrobaculum islandicum SBML MML
pla00410 Parvibaculum lavamentivorans SBML MML
plt00410 Pelodictyon luteolum SBML MML
plu00410 Photorhabdus luminescens SBML MML
pma00410 Prochlorococcus marinus SS120 SBML MML
pmb00410 Prochlorococcus marinus AS9601 SBML MML
pmc00410 Prochlorococcus marinus MIT 9515 SBML MML
pme00410 Prochlorococcus marinus NATL1A SBML MML
pmf00410 Prochlorococcus marinus MIT 9303 SBML MML
pmg00410 Prochlorococcus marinus MIT 9301 SBML MML
pmh00410 Prochlorococcus marinus MIT 9215 SBML MML
pmi00410 Prochlorococcus marinus MIT9312 SBML MML
pmj00410 Prochlorococcus marinus MIT 9211 SBML MML
pmm00410 Prochlorococcus marinus MED4 SBML MML
pmn00410 Prochlorococcus marinus NATL2A SBML MML
pmo00410 Petrotoga mobilis SBML MML
pmt00410 Prochlorococcus marinus MIT9313 SBML MML
pmy00410 Pseudomonas mendocina SBML MML
pna00410 Polaromonas naphthalenivorans SBML MML
pne00410 Polynucleobacter necessarius SBML MML
pnu00410 Polynucleobacter sp. QLW-P1DMWA-1 SBML MML
pol00410 Polaromonas sp. JS666 SBML MML
ppd00410 Pelobacter propionicus SBML MML
ppf00410 Pseudomonas putida F1 SBML MML
ppg00410 Pseudomonas putida GB-1 SBML MML
ppp00410 Physcomitrella patens subsp. patens SBML MML
ppr00410 Photobacterium profundum SBML MML
ppu00410 Pseudomonas putida KT2440 SBML MML
ppw00410 Pseudomonas putida W619 SBML MML
prw00410 Psychrobacter sp. PRwf-1 SBML MML
psa00410 Pseudomonas stutzeri SBML MML
psb00410 Pseudomonas syringae pv. syringae B728a SBML MML
psp00410 Pseudomonas syringae pv. phaseolicola 1448A SBML MML
pst00410 Pseudomonas syringae pv. tomato DC3000 SBML MML
pth00410 Pelotomaculum thermopropionicum SBML MML
pto00410 Picrophilus torridus SBML MML
ptr00410 Pan troglodytes (chimpanzee) SBML MML
pub00410 Candidatus Pelagibacter ubique SBML MML
pvi00410 Prosthecochloris vibrioformis SBML MML
pyo00410 Plasmodium yoelii SBML MML
rba00410 Rhodopirellula baltica SBML MML
rca00410 Roseiflexus castenholzii DSM13941 SBML MML
rde00410 Roseobacter denitrificans SBML MML
rec00410 Rhizobium etli CIAT 652 SBML MML
reh00410 Ralstonia eutropha H16 SBML MML
ret00410 Rhizobium etli CFN 42 SBML MML
reu00410 Ralstonia eutropha JMP134 SBML MML
rfr00410 Rhodoferax ferrireducens SBML MML
rha00410 Rhodococcus sp. RHA1 SBML MML
rle00410 Rhizobium leguminosarum SBML MML
rma00410 Candidatus Ruthia magnifica SBML MML
rme00410 Ralstonia metallidurans SBML MML
rno00410 Rattus norvegicus (rat) SBML MML
rpa00410 Rhodopseudomonas palustris CGA009 SBML MML
rpb00410 Rhodopseudomonas palustris HaA2 SBML MML
rpc00410 Rhodopseudomonas palustris BisB18 SBML MML
rpd00410 Rhodopseudomonas palustris BisB5 SBML MML
rpe00410 Rhodopseudomonas palustris BisA53 SBML MML
rpt00410 Rhodopseudomonas palustris TIE-1 SBML MML
rrs00410 Roseiflexus sp. RS-1 SBML MML
rru00410 Rhodospirillum rubrum SBML MML
rsa00410 Renibacterium salmoninarum SBML MML
rsh00410 Rhodobacter sphaeroides ATCC 17029 SBML MML
rso00410 Ralstonia solanacearum SBML MML
rsp00410 Rhodobacter sphaeroides 2.4.1 SBML MML
rsq00410 Rhodobacter sphaeroides ATCC 17025 SBML MML
rxy00410 Rubrobacter xylanophilus SBML MML
saa00410 Staphylococcus aureus USA300 SBML MML
sab00410 Staphylococcus aureus RF122 SBML MML
sac00410 Staphylococcus aureus COL SBML MML
sae00410 Staphylococcus aureus Newman SBML MML
sah00410 Staphylococcus aureus JH1 SBML MML
sai00410 Sulfolobus acidocaldarius SBML MML
saj00410 Staphylococcus aureus JH9 SBML MML
sal00410 Sphingopyxis alaskensis SBML MML
sam00410 Staphylococcus aureus MW2 SBML MML
sao00410 Staphylococcus aureus NCTC8325 SBML MML
saq00410 Salinispora arenicola SBML MML
sar00410 Staphylococcus aureus MRSA252 SBML MML
sas00410 Staphylococcus aureus MSSA476 SBML MML
sat00410 Syntrophus aciditrophicus SBML MML
sau00410 Staphylococcus aureus N315 SBML MML
sav00410 Staphylococcus aureus Mu50 SBML MML
saw00410 Staphylococcus aureus Mu3 SBML MML
sax00410 Staphylococcus aureus USA300 TCH1516 SBML MML
saz00410 Shewanella amazonensis SBML MML
sbc00410 Shigella boydii CDC 3083-94 SBML MML
sbl00410 Shewanella baltica OS155 SBML MML
sbm00410 Shewanella baltica OS185 SBML MML
sbn00410 Shewanella baltica OS195 SBML MML
sbo00410 Shigella boydii Sb227 SBML MML
sce00410 Saccharomyces cerevisiae SBML MML
scl00410 Sorangium cellulosum SBML MML
sco00410 Streptomyces coelicolor SBML MML
sde00410 Saccharophagus degradans SBML MML
sdn00410 Shewanella denitrificans SBML MML
sdy00410 Shigella dysenteriae SBML MML
sec00410 Salmonella enterica subsp. enterica serovar Choleraesuis SBML MML
sen00410 Saccharopolyspora erythraea SBML MML
sep00410 Staphylococcus epidermidis ATCC 12228 SBML MML
ser00410 Staphylococcus epidermidis RP62A SBML MML
ses00410 Salmonella enterica subsp. arizonae SBML MML
sfl00410 Shigella flexneri 301 (serotype 2a) SBML MML
sfr00410 Shewanella frigidimarina SBML MML
sfu00410 Syntrophobacter fumaroxidans SBML MML
sfv00410 Shigella flexneri 8401 (serotype 5b) SBML MML
sfx00410 Shigella flexneri 2457T (serotype 2a) SBML MML
sgl00410 Sodalis glossinidius SBML MML
sgr00410 Streptomyces griseus SBML MML
sha00410 Staphylococcus haemolyticus SBML MML
she00410 Shewanella sp. MR-4 SBML MML
shl00410 Shewanella halifaxensis SBML MML
shm00410 Shewanella sp. MR-7 SBML MML
shn00410 Shewanella sp. ANA-3 SBML MML
shw00410 Shewanella sp. W3-18-1 SBML MML
sil00410 Ruegeria pomeroyi SBML MML
sit00410 Silicibacter sp. TM1040 SBML MML
slo00410 Shewanella loihica SBML MML
sma00410 Streptomyces avermitilis SBML MML
smd00410 Sinorhizobium medicae SBML MML
sme00410 Sinorhizobium meliloti SBML MML
sml00410 Stenotrophomonas maltophilia SBML MML
smr00410 Staphylothermus marinus SBML MML
son00410 Shewanella oneidensis SBML MML
spa00410 Streptococcus pyogenes MGAS10394 (serotype M6) SBML MML
spb00410 Streptococcus pyogenes MGAS6180 (serotype M28) SBML MML
spc00410 Shewanella putrefaciens SBML MML
spd00410 Streptococcus pneumoniae D39 SBML MML
spe00410 Serratia proteamaculans SBML MML
spf00410 Streptococcus pyogenes Manfredo (serotype M5) SBML MML
sph00410 Streptococcus pyogenes MGAS10270 (serotype M2) SBML MML
spi00410 Streptococcus pyogenes MGAS10750 (serotype M4) SBML MML
spj00410 Streptococcus pyogenes MGAS2096 (serotype M12) SBML MML
spk00410 Streptococcus pyogenes MGAS9429 (serotype M12) SBML MML
spl00410 Shewanella pealeana SBML MML
spn00410 Streptococcus pneumoniae TIGR4 SBML MML
spo00410 Schizosaccharomyces pombe SBML MML
spq00410 Salmonella enterica subsp. enterica serovar Paratyphi B SBML MML
spr00410 Streptococcus pneumoniae R6 SBML MML
spt00410 Salmonella enterica subsp. enterica serovar Paratyphi A SBML MML
spu00410 Strongylocentrotus purpuratus (purple sea urchin) SBML MML
spv00410 Streptococcus pneumoniae Hungary19A 6 SBML MML
spw00410 Streptococcus pneumoniae CGSP14 (serotype 14) SBML MML
spz00410 Streptococcus pyogenes MGAS5005 (serotype M1) SBML MML
sru00410 Salinibacter ruber SBML MML
ssc00410 Sus scrofa (pig) SBML MML
sse00410 Shewanella sediminis SBML MML
ssn00410 Shigella sonnei SBML MML
sso00410 Sulfolobus solfataricus SBML MML
ssp00410 Staphylococcus saprophyticus SBML MML
sth00410 Symbiobacterium thermophilum SBML MML
stm00410 Salmonella typhimurium LT2 SBML MML
sto00410 Sulfolobus tokodaii SBML MML
stp00410 Salinispora tropica SBML MML
stt00410 Salmonella enterica subsp. enterica serovar Typhi Ty2 SBML MML
sty00410 Salmonella enterica subsp. enterica serovar Typhi CT18 SBML MML
sul00410 Sulfurihydrogenibium sp. YO3AOP1 SBML MML
sun00410 Sulfurovum sp. NBC37-1 SBML MML
sus00410 Solibacter usitatus SBML MML
swd00410 Shewanella woodyi ATCC 51908 SBML MML
swi00410 Sphingomonas wittichii SBML MML
swo00410 Syntrophomonas wolfei SBML MML
syc00410 Synechococcus elongatus PCC6301 SBML MML
syd00410 Synechococcus sp. CC9605 SBML MML
sye00410 Synechococcus sp. CC9902 SBML MML
syf00410 Synechococcus elongatus PCC7942 SBML MML
syg00410 Synechococcus sp. CC9311 SBML MML
syn00410 Synechocystis sp. PCC6803 SBML MML
syp00410 Synechococcus sp. PCC7002 SBML MML
syr00410 Synechococcus sp. RCC307 SBML MML
syw00410 Synechococcus sp. WH8102 SBML MML
syx00410 Synechococcus sp. WH7803 SBML MML
tac00410 Thermoplasma acidophilum SBML MML
tbd00410 Thiobacillus denitrificans SBML MML
tbr00410 Trypanosoma brucei SBML MML
tca00410 Tribolium castaneum (red flour beetle) SBML MML
tcr00410 Trypanosoma cruzi SBML MML
tcx00410 Thiomicrospira crunogena SBML MML
tde00410 Treponema denticola SBML MML
tdn00410 Thiomicrospira denitrificans SBML MML
tel00410 Thermosynechococcus elongatus SBML MML
ter00410 Trichodesmium erythraeum SBML MML
tet00410 Tetrahymena thermophila SBML MML
tex00410 Thermoanaerobacter sp. X514 SBML MML
tfu00410 Thermobifida fusca SBML MML
tko00410 Thermococcus kodakaraensis SBML MML
tle00410 Thermotoga lettingae SBML MML
tma00410 Thermotoga maritima SBML MML
tme00410 Thermosipho melanesiensis SBML MML
tne00410 Thermoproteus neutrophilus SBML MML
tpd00410 Thermoanaerobacter pseudethanolicus SBML MML
tpe00410 Thermofilum pendens SBML MML
tpt00410 Thermotoga petrophila SBML MML
trq00410 Thermotoga sp. RQ2 SBML MML
tth00410 Thermus thermophilus HB27 SBML MML
ttj00410 Thermus thermophilus HB8 SBML MML
tva00410 Trichomonas vaginalis SBML MML
tvo00410 Thermoplasma volcanium SBML MML
twh00410 Tropheryma whipplei Twist SBML MML
tws00410 Tropheryma whipplei TW08/27 SBML MML
uma00410 Ustilago maydis SBML MML
vch00410 Vibrio cholerae O1 SBML MML
vco00410 Vibrio cholerae O395 SBML MML
vei00410 Verminephrobacter eiseniae SBML MML
vfi00410 Vibrio fischeri SBML MML
vha00410 Vibrio harveyi SBML MML
vok00410 Candidatus Vesicomyosocius okutanii SBML MML
vpa00410 Vibrio parahaemolyticus SBML MML
vpo00410 Vanderwaltozyma polyspora SBML MML
vvu00410 Vibrio vulnificus CMCP6 SBML MML
vvy00410 Vibrio vulnificus YJ016 SBML MML
wsu00410 Wolinella succinogenes SBML MML
xac00410 Xanthomonas axonopodis SBML MML
xau00410 Xanthobacter autotrophicus SBML MML
xcb00410 Xanthomonas campestris pv. campestris 8004 SBML MML
xcc00410 Xanthomonas campestris pv. campestris ATCC 33913 SBML MML
xcv00410 Xanthomonas campestris pv. vesicatoria SBML MML
xfa00410 Xylella fastidiosa 9a5c SBML MML
xfm00410 Xylella fastidiosa M12 SBML MML
xfn00410 Xylella fastidiosa M23 SBML MML
xft00410 Xylella fastidiosa Temecula1 SBML MML
xla00410 Xenopus laevis (African clawed frog) SBML MML
xom00410 Xanthomonas oryzae MAFF311018 SBML MML
xoo00410 Xanthomonas oryzae KACC10331 SBML MML
xtr00410 Xenopus tropicalis (western clawed frog) SBML MML
yen00410 Yersinia enterocolitica SBML MML
yli00410 Yarrowia lipolytica SBML MML
ypa00410 Yersinia pestis Antiqua SBML MML
ype00410 Yersinia pestis CO92 SBML MML
ypg00410 Yersinia pestis Angola SBML MML
ypi00410 Yersinia pseudotuberculosis IP31758 SBML MML
ypk00410 Yersinia pestis KIM SBML MML
ypm00410 Yersinia pestis Mediaevails SBML MML
ypn00410 Yersinia pestis Nepal516 SBML MML
ypp00410 Yersinia pestis Pestoides SBML MML
yps00410 Yersinia pseudotuberculosis IP32953 SBML MML
ypy00410 Yersinia pseudotuberculosis YPIII SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.