This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00364: Fluorobenzoate degradation

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aae00364 Aquifex aeolicus SBML MML
aau00364 Arthrobacter aurescens SBML MML
aav00364 Acidovorax avenae SBML MML
aba00364 Acidobacteria bacterium SBML MML
abc00364 Acinetobacter baumannii ACICU SBML MML
abm00364 Acinetobacter baumannii SDF SBML MML
aby00364 Acinetobacter baumannii AYE SBML MML
acb00364 Acinetobacter baumannii ATCC 17978 SBML MML
ace00364 Acidothermus cellulolyticus SBML MML
aci00364 Acinetobacter sp. ADP1 SBML MML
acr00364 Acidiphilium cryptum JF-5 SBML MML
afm00364 Aspergillus fumigatus SBML MML
afw00364 Anaeromyxobacter sp. Fw109-5 SBML MML
ago00364 Ashbya gossypii (Eremothecium gossypii) SBML MML
ajs00364 Acidovorax sp. JS42 SBML MML
amr00364 Acaryochloris marina SBML MML
ana00364 Anabaena sp. PCC7120 SBML MML
ang00364 Aspergillus niger SBML MML
ani00364 Aspergillus nidulans SBML MML
aor00364 Aspergillus oryzae SBML MML
art00364 Arthrobacter sp. FB24 SBML MML
asa00364 Aeromonas salmonicida SBML MML
atc00364 Agrobacterium tumefaciens C58 (Cereon) SBML MML
ath00364 Arabidopsis thaliana (thale cress) SBML MML
atu00364 Agrobacterium tumefaciens C58 SBML MML
ava00364 Anabaena variabilis SBML MML
azc00364 Azorhizobium caulinodans SBML MML
azo00364 Azoarcus sp. BH72 SBML MML
bac00364 Burkholderia ambifaria MC40-6 SBML MML
bam00364 Burkholderia cepacia SBML MML
bav00364 Bordetella avium SBML MML
bba00364 Bdellovibrio bacteriovorus SBML MML
bbr00364 Bordetella bronchiseptica SBML MML
bbt00364 Bradyrhizobium sp. BTAi1 SBML MML
bch00364 Burkholderia cenocepacia HI2424 SBML MML
bcm00364 Burkholderia cenocepacia MC0-3 SBML MML
bcn00364 Burkholderia cenocepacia AU1054 SBML MML
bid00364 Beijerinckia indica SBML MML
bja00364 Bradyrhizobium japonicum SBML MML
bma00364 Burkholderia mallei ATCC 23344 SBML MML
bme00364 Brucella melitensis 16M SBML MML
bml00364 Burkholderia mallei NCTC 10229 SBML MML
bmn00364 Burkholderia mallei NCTC 10247 SBML MML
bmu00364 Burkholderia multivorans ATCC 17616 (JGI) SBML MML
bmv00364 Burkholderia mallei SAVP1 SBML MML
bpa00364 Bordetella parapertussis SBML MML
bpd00364 Burkholderia pseudomallei 668 SBML MML
bpe00364 Bordetella pertussis SBML MML
bph00364 Burkholderia phymatum SBML MML
bpl00364 Burkholderia pseudomallei 1106a SBML MML
bpm00364 Burkholderia pseudomallei 1710b SBML MML
bps00364 Burkholderia pseudomallei K96243 SBML MML
bpt00364 Bordetella petrii SBML MML
bra00364 Bradyrhizobium sp. ORS278 SBML MML
bte00364 Burkholderia thailandensis SBML MML
bur00364 Burkholderia sp. 383 SBML MML
bvi00364 Burkholderia vietnamiensis SBML MML
bxe00364 Burkholderia xenovorans SBML MML
cak00364 Caulobacter sp. K31 SBML MML
cau00364 Chloroflexus aurantiacus SBML MML
ccr00364 Caulobacter crescentus CB15 SBML MML
cef00364 Corynebacterium efficiens SBML MML
cfa00364 Canis familiaris (dog) SBML MML
cgb00364 Corynebacterium glutamicum ATCC 13032 (Bielefeld) SBML MML
cgl00364 Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) SBML MML
cgr00364 Candida glabrata SBML MML
cgt00364 Corynebacterium glutamicum R SBML MML
cja00364 Cellvibrio japonicus SBML MML
cko00364 Citrobacter koseri ATCC BAA-895 SBML MML
cma00364 Caldivirga maquilingensis SBML MML
cmi00364 Clavibacter michiganensis subsp. michiganensis SBML MML
cms00364 Clavibacter michiganensis subsp. sepedonicus SBML MML
cnb00364 Cryptococcus neoformans B-3501A SBML MML
cne00364 Cryptococcus neoformans JEC21 SBML MML
cps00364 Colwellia psychrerythraea SBML MML
cre00364 Chlamydomonas reinhardtii SBML MML
csa00364 Chromohalobacter salexigens SBML MML
cti00364 Cupriavidus taiwanensis SBML MML
cvi00364 Chromobacterium violaceum SBML MML
cyt00364 Cyanothece sp. ATCC 51142 SBML MML
daag00364 (Undocumented) SBML MML
dac00364 Delftia acidovorans SBML MML
dar00364 Dechloromonas aromatica SBML MML
decb00364 (Undocumented) SBML MML
dfru00364 Fugu rubripes (Japanese puffer fish) SBML MML
dha00364 Debaryomyces hansenii SBML MML
dkwa00364 Kluyveromyces waltii SBML MML
dola00364 Oryzias latipes (Japanese medaka) SBML MML
dpop00364 (Undocumented) SBML MML
dptm00364 (Undocumented) SBML MML
dsba00364 Saccharomyces bayanus SBML MML
dsh00364 Dinoroseobacter shibae SBML MML
dsmi00364 Saccharomyces mikatae SBML MML
dspd00364 (Undocumented) SBML MML
dtni00364 Tetraodon nigroviridis (green spotted puffer) SBML MML
dvvi00364 (Undocumented) SBML MML
eath00364 Arabidopsis thaliana (thale cress) (EST) SBML MML
eca00364 Erwinia carotovora SBML MML
ecc00364 Escherichia coli CFT073 (UPEC) SBML MML
ecd00364 Escherichia coli K-12 DH10B SBML MML
ece00364 Escherichia coli O157 EDL933 (EHEC) SBML MML
eci00364 Escherichia coli UTI89 (UPEC) SBML MML
ecl00364 Escherichia coli ATCC 8739 SBML MML
ecm00364 Escherichia coli SECEC SBML MML
eco00364 Escherichia coli K-12 MG1655 SBML MML
ecp00364 Escherichia coli 536 (UPEC) SBML MML
ecs00364 Escherichia coli O157 Sakai (EHEC) SBML MML
ecv00364 Escherichia coli APEC O1 SBML MML
ecw00364 Escherichia coli E24377A SBML MML
ecx00364 Escherichia coli HS SBML MML
egma00364 Glycine max (soybean) (EST) SBML MML
eli00364 Erythrobacter litoralis SBML MML
emec00364 Manihot esculenta (cassava) (EST) SBML MML
ent00364 Enterobacter sp. 638 SBML MML
eosa00364 Oryza sativa (rice) (EST) SBML MML
epop00364 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00364 (Undocumented) SBML MML
eppp00364 Physcomitrella patens subsp. patens (EST) SBML MML
epta00364 Pinus taeda (loblolly pine) (EST) SBML MML
esa00364 Enterobacter sakazakii SBML MML
eta00364 Erwinia tasmaniensis SBML MML
etae00364 Triticum aestivum (wheat) (EST) SBML MML
ezma00364 Zea mays (maize) (EST) SBML MML
fal00364 Frankia alni SBML MML
fgr00364 Fusarium graminearum SBML MML
fjo00364 Flavobacterium johnsoniae SBML MML
fra00364 Frankia sp. CcI3 SBML MML
fre00364 Frankia sp. EAN1pec SBML MML
gbe00364 Granulobacter bethesdensis SBML MML
gdi00364 Gluconacetobacter diazotrophicus PAl 5 (Brazil) SBML MML
gox00364 Gluconobacter oxydans SBML MML
gsu00364 Geobacter sulfurreducens SBML MML
gvi00364 Gloeobacter violaceus SBML MML
har00364 Herminiimonas arsenicoxydans SBML MML
hau00364 Herpetosiphon aurantiacus SBML MML
hch00364 Hahella chejuensis SBML MML
hsa00364 Homo sapiens (human) SBML MML
kla00364 Kluyveromyces lactis SBML MML
kpn00364 Klebsiella pneumoniae SBML MML
kra00364 Kineococcus radiotolerans SBML MML
lbc00364 Laccaria bicolor SBML MML
lch00364 Leptothrix cholodnii SBML MML
lpc00364 Legionella pneumophila Corby SBML MML
lpf00364 Legionella pneumophila Lens SBML MML
lpn00364 Legionella pneumophila Philadelphia 1 SBML MML
lpp00364 Legionella pneumophila Paris SBML MML
mab00364 Mycobacterium abscessus ATCC 19977T SBML MML
mag00364 Magnetospirillum magneticum SBML MML
mar00364 Microcystis aeruginosa SBML MML
mav00364 Mycobacterium avium 104 SBML MML
mbb00364 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbo00364 Mycobacterium bovis AF2122/97 SBML MML
mcc00364 Macaca mulatta (rhesus monkey) SBML MML
mem00364 Methanoculleus marisnigri SBML MML
mes00364 Mesorhizobium sp. BNC1 SBML MML
met00364 Methylobacterium sp. 4-46 SBML MML
mex00364 Methylobacterium extorquens SBML MML
mfa00364 Methylobacillus flagellatus SBML MML
mgi00364 Mycobacterium gilvum SBML MML
mgr00364 Magnaporthe grisea SBML MML
mjl00364 Mycobacterium sp. JLS SBML MML
mkm00364 Mycobacterium sp. KMS SBML MML
mle00364 Mycobacterium leprae TN SBML MML
mlo00364 Mesorhizobium loti SBML MML
mmc00364 Mycobacterium sp. MCS SBML MML
mmi00364 Mycobacterium marinum M SBML MML
mmr00364 Maricaulis maris SBML MML
mms00364 Minibacterium massiliensis SBML MML
mmw00364 Marinomonas sp. MWYL1 SBML MML
mpa00364 Mycobacterium avium paratuberculosis SBML MML
mpt00364 Methylibium petroleiphilum SBML MML
mra00364 Mycobacterium tuberculosis H37Ra SBML MML
mrd00364 Methylobacterium radiotolerans SBML MML
mse00364 Metallosphaera sedula SBML MML
msm00364 Mycobacterium smegmatis SBML MML
mtc00364 Mycobacterium tuberculosis CDC1551 SBML MML
mtf00364 Mycobacterium tuberculosis F11 SBML MML
mtu00364 Mycobacterium tuberculosis H37Rv SBML MML
mul00364 Mycobacterium ulcerans SBML MML
mva00364 Mycobacterium vanbaalenii SBML MML
mxa00364 Myxococcus xanthus SBML MML
nar00364 Novosphingobium aromaticivorans SBML MML
nca00364 Nocardioides sp. JS614 SBML MML
ncr00364 Neurospora crassa SBML MML
nfa00364 Nocardia farcinica SBML MML
noc00364 Nitrosococcus oceani SBML MML
npu00364 Nostoc punctiforme SBML MML
nve00364 Nematostella vectensis (sea anemone) SBML MML
oaa00364 Ornithorhynchus anatinus (platypus) SBML MML
oan00364 Ochrobactrum anthropi SBML MML
olu00364 Ostreococcus lucimarinus SBML MML
osa00364 Oryza sativa japonica (Japanese rice) SBML MML
pae00364 Pseudomonas aeruginosa PAO1 SBML MML
pan00364 Podospora anserina SBML MML
pap00364 Pseudomonas aeruginosa PA7 SBML MML
pat00364 Pseudoalteromonas atlantica SBML MML
pau00364 Pseudomonas aeruginosa UCBPP-PA14 SBML MML
pcr00364 Psychrobacter cryohalolentis SBML MML
pde00364 Paracoccus denitrificans SBML MML
pen00364 Pseudomonas entomophila SBML MML
pfl00364 Pseudomonas fluorescens Pf-5 SBML MML
pfo00364 Pseudomonas fluorescens Pf0-1 SBML MML
pha00364 Pseudoalteromonas haloplanktis SBML MML
pic00364 Pichia stipitis SBML MML
pla00364 Parvibaculum lavamentivorans SBML MML
pmf00364 Prochlorococcus marinus MIT 9303 SBML MML
pmg00364 Prochlorococcus marinus MIT 9301 SBML MML
pmi00364 Prochlorococcus marinus MIT9312 SBML MML
pmt00364 Prochlorococcus marinus MIT9313 SBML MML
pna00364 Polaromonas naphthalenivorans SBML MML
pnu00364 Polynucleobacter sp. QLW-P1DMWA-1 SBML MML
pol00364 Polaromonas sp. JS666 SBML MML
ppf00364 Pseudomonas putida F1 SBML MML
ppg00364 Pseudomonas putida GB-1 SBML MML
ppu00364 Pseudomonas putida KT2440 SBML MML
ppw00364 Pseudomonas putida W619 SBML MML
prw00364 Psychrobacter sp. PRwf-1 SBML MML
psa00364 Pseudomonas stutzeri SBML MML
psb00364 Pseudomonas syringae pv. syringae B728a SBML MML
psp00364 Pseudomonas syringae pv. phaseolicola 1448A SBML MML
pst00364 Pseudomonas syringae pv. tomato DC3000 SBML MML
pto00364 Picrophilus torridus SBML MML
rba00364 Rhodopirellula baltica SBML MML
rca00364 Roseiflexus castenholzii DSM13941 SBML MML
rde00364 Roseobacter denitrificans SBML MML
rec00364 Rhizobium etli CIAT 652 SBML MML
reh00364 Ralstonia eutropha H16 SBML MML
ret00364 Rhizobium etli CFN 42 SBML MML
reu00364 Ralstonia eutropha JMP134 SBML MML
rfr00364 Rhodoferax ferrireducens SBML MML
rha00364 Rhodococcus sp. RHA1 SBML MML
rle00364 Rhizobium leguminosarum SBML MML
rme00364 Ralstonia metallidurans SBML MML
rno00364 Rattus norvegicus (rat) SBML MML
rpa00364 Rhodopseudomonas palustris CGA009 SBML MML
rpb00364 Rhodopseudomonas palustris HaA2 SBML MML
rpc00364 Rhodopseudomonas palustris BisB18 SBML MML
rpd00364 Rhodopseudomonas palustris BisB5 SBML MML
rpe00364 Rhodopseudomonas palustris BisA53 SBML MML
rpt00364 Rhodopseudomonas palustris TIE-1 SBML MML
rrs00364 Roseiflexus sp. RS-1 SBML MML
rru00364 Rhodospirillum rubrum SBML MML
rsa00364 Renibacterium salmoninarum SBML MML
rso00364 Ralstonia solanacearum SBML MML
sai00364 Sulfolobus acidocaldarius SBML MML
sal00364 Sphingopyxis alaskensis SBML MML
saq00364 Salinispora arenicola SBML MML
sat00364 Syntrophus aciditrophicus SBML MML
saz00364 Shewanella amazonensis SBML MML
sbc00364 Shigella boydii CDC 3083-94 SBML MML
sbl00364 Shewanella baltica OS155 SBML MML
sbm00364 Shewanella baltica OS185 SBML MML
sbn00364 Shewanella baltica OS195 SBML MML
sbo00364 Shigella boydii Sb227 SBML MML
sce00364 Saccharomyces cerevisiae SBML MML
scl00364 Sorangium cellulosum SBML MML
sco00364 Streptomyces coelicolor SBML MML
sdn00364 Shewanella denitrificans SBML MML
sdy00364 Shigella dysenteriae SBML MML
sec00364 Salmonella enterica subsp. enterica serovar Choleraesuis SBML MML
sen00364 Saccharopolyspora erythraea SBML MML
ses00364 Salmonella enterica subsp. arizonae SBML MML
sfl00364 Shigella flexneri 301 (serotype 2a) SBML MML
sfv00364 Shigella flexneri 8401 (serotype 5b) SBML MML
she00364 Shewanella sp. MR-4 SBML MML
shl00364 Shewanella halifaxensis SBML MML
shm00364 Shewanella sp. MR-7 SBML MML
shn00364 Shewanella sp. ANA-3 SBML MML
shw00364 Shewanella sp. W3-18-1 SBML MML
sma00364 Streptomyces avermitilis SBML MML
smd00364 Sinorhizobium medicae SBML MML
sme00364 Sinorhizobium meliloti SBML MML
sml00364 Stenotrophomonas maltophilia SBML MML
son00364 Shewanella oneidensis SBML MML
spc00364 Shewanella putrefaciens SBML MML
spe00364 Serratia proteamaculans SBML MML
spl00364 Shewanella pealeana SBML MML
spq00364 Salmonella enterica subsp. enterica serovar Paratyphi B SBML MML
spt00364 Salmonella enterica subsp. enterica serovar Paratyphi A SBML MML
sru00364 Salinibacter ruber SBML MML
sse00364 Shewanella sediminis SBML MML
ssn00364 Shigella sonnei SBML MML
sso00364 Sulfolobus solfataricus SBML MML
stm00364 Salmonella typhimurium LT2 SBML MML
sto00364 Sulfolobus tokodaii SBML MML
stp00364 Salinispora tropica SBML MML
stt00364 Salmonella enterica subsp. enterica serovar Typhi Ty2 SBML MML
sty00364 Salmonella enterica subsp. enterica serovar Typhi CT18 SBML MML
sus00364 Solibacter usitatus SBML MML
swd00364 Shewanella woodyi ATCC 51908 SBML MML
swi00364 Sphingomonas wittichii SBML MML
syc00364 Synechococcus elongatus PCC6301 SBML MML
syd00364 Synechococcus sp. CC9605 SBML MML
syf00364 Synechococcus elongatus PCC7942 SBML MML
syg00364 Synechococcus sp. CC9311 SBML MML
syn00364 Synechocystis sp. PCC6803 SBML MML
syp00364 Synechococcus sp. PCC7002 SBML MML
syr00364 Synechococcus sp. RCC307 SBML MML
syw00364 Synechococcus sp. WH8102 SBML MML
syx00364 Synechococcus sp. WH7803 SBML MML
tel00364 Thermosynechococcus elongatus SBML MML
ter00364 Trichodesmium erythraeum SBML MML
tet00364 Tetrahymena thermophila SBML MML
uma00364 Ustilago maydis SBML MML
vei00364 Verminephrobacter eiseniae SBML MML
vha00364 Vibrio harveyi SBML MML
vpa00364 Vibrio parahaemolyticus SBML MML
vpo00364 Vanderwaltozyma polyspora SBML MML
vvu00364 Vibrio vulnificus CMCP6 SBML MML
vvy00364 Vibrio vulnificus YJ016 SBML MML
xac00364 Xanthomonas axonopodis SBML MML
xau00364 Xanthobacter autotrophicus SBML MML
xcb00364 Xanthomonas campestris pv. campestris 8004 SBML MML
xcc00364 Xanthomonas campestris pv. campestris ATCC 33913 SBML MML
xcv00364 Xanthomonas campestris pv. vesicatoria SBML MML
xom00364 Xanthomonas oryzae MAFF311018 SBML MML
xoo00364 Xanthomonas oryzae KACC10331 SBML MML
yen00364 Yersinia enterocolitica SBML MML
yli00364 Yarrowia lipolytica SBML MML
ypa00364 Yersinia pestis Antiqua SBML MML
ype00364 Yersinia pestis CO92 SBML MML
ypg00364 Yersinia pestis Angola SBML MML
ypi00364 Yersinia pseudotuberculosis IP31758 SBML MML
ypk00364 Yersinia pestis KIM SBML MML
ypm00364 Yersinia pestis Mediaevails SBML MML
ypn00364 Yersinia pestis Nepal516 SBML MML
ypp00364 Yersinia pestis Pestoides SBML MML
yps00364 Yersinia pseudotuberculosis IP32953 SBML MML
ypy00364 Yersinia pseudotuberculosis YPIII SBML MML
zmo00364 Zymomonas mobilis SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.