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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00310: Lysine degradation

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aae00310 Aquifex aeolicus SBML MML
aau00310 Arthrobacter aurescens SBML MML
aav00310 Acidovorax avenae SBML MML
aba00310 Acidobacteria bacterium SBML MML
abc00310 Acinetobacter baumannii ACICU SBML MML
abm00310 Acinetobacter baumannii SDF SBML MML
abo00310 Alcanivorax borkumensis SBML MML
abu00310 Arcobacter butzleri SBML MML
aby00310 Acinetobacter baumannii AYE SBML MML
acb00310 Acinetobacter baumannii ATCC 17978 SBML MML
ace00310 Acidothermus cellulolyticus SBML MML
aci00310 Acinetobacter sp. ADP1 SBML MML
acl00310 Acholeplasma laidlawii SBML MML
acr00310 Acidiphilium cryptum JF-5 SBML MML
ade00310 Anaeromyxobacter dehalogenans 2CP-C SBML MML
aeh00310 Alkalilimnicola ehrlichei SBML MML
afm00310 Aspergillus fumigatus SBML MML
afu00310 Archaeoglobus fulgidus SBML MML
afw00310 Anaeromyxobacter sp. Fw109-5 SBML MML
aga00310 Anopheles gambiae (mosquito) SBML MML
ago00310 Ashbya gossypii (Eremothecium gossypii) SBML MML
aha00310 Aeromonas hydrophila SBML MML
ajs00310 Acidovorax sp. JS42 SBML MML
ama00310 Anaplasma marginale St. Maries SBML MML
amr00310 Acaryochloris marina SBML MML
amt00310 Alkaliphilus metalliredigens SBML MML
ana00310 Anabaena sp. PCC7120 SBML MML
ang00310 Aspergillus niger SBML MML
ani00310 Aspergillus nidulans SBML MML
aoe00310 Alkaliphilus oremlandii SBML MML
aor00310 Aspergillus oryzae SBML MML
apa00310 Actinobacillus pleuropneumoniae AP76 (serotype 7) SBML MML
ape00310 Aeropyrum pernix SBML MML
aph00310 Anaplasma phagocytophilum SBML MML
apj00310 Actinobacillus pleuropneumoniae JL03 (serotype 3) SBML MML
apl00310 Actinobacillus pleuropneumoniae L20 (serotype 5b) SBML MML
art00310 Arthrobacter sp. FB24 SBML MML
asa00310 Aeromonas salmonicida SBML MML
asu00310 Actinobacillus succinogenes SBML MML
atc00310 Agrobacterium tumefaciens C58 (Cereon) SBML MML
ath00310 Arabidopsis thaliana (thale cress) SBML MML
atu00310 Agrobacterium tumefaciens C58 SBML MML
ava00310 Anabaena variabilis SBML MML
azc00310 Azorhizobium caulinodans SBML MML
azo00310 Azoarcus sp. BH72 SBML MML
baa00310 Bacillus anthracis A2012 SBML MML
bab00310 Buchnera aphidicola Bp SBML MML
bac00310 Burkholderia ambifaria MC40-6 SBML MML
bam00310 Burkholderia cepacia SBML MML
ban00310 Bacillus anthracis Ames SBML MML
bar00310 Bacillus anthracis Ames 0581 SBML MML
bas00310 Buchnera aphidicola Sg SBML MML
bat00310 Bacillus anthracis Sterne SBML MML
bav00310 Bordetella avium SBML MML
bay00310 Bacillus amyloliquefaciens SBML MML
bba00310 Bdellovibrio bacteriovorus SBML MML
bbk00310 Bartonella bacilliformis SBML MML
bbr00310 Bordetella bronchiseptica SBML MML
bbt00310 Bradyrhizobium sp. BTAi1 SBML MML
bca00310 Bacillus cereus ATCC 10987 SBML MML
bcc00310 Buchnera aphidicola Cc SBML MML
bce00310 Bacillus cereus ATCC 14579 SBML MML
bch00310 Burkholderia cenocepacia HI2424 SBML MML
bcl00310 Bacillus clausii SBML MML
bcm00310 Burkholderia cenocepacia MC0-3 SBML MML
bcn00310 Burkholderia cenocepacia AU1054 SBML MML
bcs00310 Brucella canis SBML MML
bcy00310 Bacillus cytotoxis NVH 391-98 SBML MML
bcz00310 Bacillus cereus ZK SBML MML
bfl00310 Candidatus Blochmannia floridanus SBML MML
bha00310 Bacillus halodurans SBML MML
bhe00310 Bartonella henselae SBML MML
bid00310 Beijerinckia indica SBML MML
bja00310 Bradyrhizobium japonicum SBML MML
bld00310 Bacillus licheniformis DSM13 SBML MML
bli00310 Bacillus licheniformis ATCC 14580 SBML MML
blj00310 Bifidobacterium longum DJO10A SBML MML
bma00310 Burkholderia mallei ATCC 23344 SBML MML
bmb00310 Brucella abortus 9-941 SBML MML
bmc00310 Brucella abortus S19 SBML MML
bme00310 Brucella melitensis 16M SBML MML
bmf00310 Brucella melitensis biovar Abortus SBML MML
bml00310 Burkholderia mallei NCTC 10229 SBML MML
bmn00310 Burkholderia mallei NCTC 10247 SBML MML
bms00310 Brucella suis 1330 SBML MML
bmt00310 Brucella suis ATCC 23445 SBML MML
bmu00310 Burkholderia multivorans ATCC 17616 (JGI) SBML MML
bmv00310 Burkholderia mallei SAVP1 SBML MML
bmy00310 Brugia malayi (filaria) SBML MML
bov00310 Brucella ovis SBML MML
bpa00310 Bordetella parapertussis SBML MML
bpd00310 Burkholderia pseudomallei 668 SBML MML
bpe00310 Bordetella pertussis SBML MML
bph00310 Burkholderia phymatum SBML MML
bpl00310 Burkholderia pseudomallei 1106a SBML MML
bpm00310 Burkholderia pseudomallei 1710b SBML MML
bpn00310 Candidatus Blochmannia pennsylvanicus SBML MML
bps00310 Burkholderia pseudomallei K96243 SBML MML
bpt00310 Bordetella petrii SBML MML
bpu00310 Bacillus pumilus SBML MML
bqu00310 Bartonella quintana SBML MML
bra00310 Bradyrhizobium sp. ORS278 SBML MML
bsu00310 Bacillus subtilis SBML MML
bta00310 Bos taurus (cow) SBML MML
bte00310 Burkholderia thailandensis SBML MML
btk00310 Bacillus thuringiensis 97-27 SBML MML
btl00310 Bacillus thuringiensis Al Hakam SBML MML
btr00310 Bartonella tribocorum SBML MML
buc00310 Buchnera aphidicola APS SBML MML
bur00310 Burkholderia sp. 383 SBML MML
bvi00310 Burkholderia vietnamiensis SBML MML
bwe00310 Bacillus weihenstephanensis SBML MML
bxe00310 Burkholderia xenovorans SBML MML
cab00310 Chlamydophila abortus SBML MML
cac00310 Clostridium acetobutylicum SBML MML
cak00310 Caulobacter sp. K31 SBML MML
cal00310 Candida albicans SBML MML
cau00310 Chloroflexus aurantiacus SBML MML
cba00310 Clostridium botulinum A ATCC 19397 SBML MML
cbb00310 Clostridium botulinum B1 Okra SBML MML
cbd00310 Coxiella burnetii Dugway 5J108-111 SBML MML
cbe00310 Clostridium beijerinckii SBML MML
cbf00310 Clostridium botulinum F Langeland SBML MML
cbh00310 Clostridium botulinum A Hall SBML MML
cbk00310 Clostridium botulinum B Eklund 17B SBML MML
cbl00310 Clostridium botulinum A3 Loch Maree SBML MML
cbo00310 Clostridium botulinum A ATCC 3502 SBML MML
cbs00310 Coxiella burnetii RSA 331 SBML MML
cbu00310 Coxiella burnetii RSA 493 SBML MML
cca00310 Chlamydophila caviae SBML MML
cco00310 Campylobacter concisus 13826 SBML MML
ccr00310 Caulobacter crescentus CB15 SBML MML
ccv00310 Campylobacter curvus SBML MML
cdf00310 Clostridium difficile SBML MML
cdi00310 Corynebacterium diphtheriae SBML MML
cef00310 Corynebacterium efficiens SBML MML
cel00310 Caenorhabditis elegans (nematode) SBML MML
cfa00310 Canis familiaris (dog) SBML MML
cfe00310 Chlamydophila felis SBML MML
cff00310 Campylobacter fetus SBML MML
cgb00310 Corynebacterium glutamicum ATCC 13032 (Bielefeld) SBML MML
cgl00310 Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) SBML MML
cgr00310 Candida glabrata SBML MML
cgt00310 Corynebacterium glutamicum R SBML MML
cha00310 Campylobacter hominis ATCC BAA-381 SBML MML
cho00310 Cryptosporidium hominis SBML MML
chu00310 Cytophaga hutchinsonii SBML MML
chy00310 Carboxydothermus hydrogenoformans SBML MML
cja00310 Cellvibrio japonicus SBML MML
cjd00310 Campylobacter jejuni subsp. doylei 269.97 SBML MML
cjj00310 Campylobacter jejuni 81-176 SBML MML
cjk00310 Corynebacterium jeikeium SBML MML
cjr00310 Campylobacter jejuni RM1221 SBML MML
cju00310 Campylobacter jejuni 81116 SBML MML
ckl00310 Clostridium kluyveri DSM 555 SBML MML
cko00310 Citrobacter koseri ATCC BAA-895 SBML MML
cma00310 Caldivirga maquilingensis SBML MML
cme00310 Cyanidioschyzon merolae SBML MML
cmi00310 Clavibacter michiganensis subsp. michiganensis SBML MML
cms00310 Clavibacter michiganensis subsp. sepedonicus SBML MML
cmu00310 Chlamydia muridarum SBML MML
cnb00310 Cryptococcus neoformans B-3501A SBML MML
cne00310 Cryptococcus neoformans JEC21 SBML MML
cno00310 Clostridium novyi SBML MML
cpa00310 Chlamydophila pneumoniae AR39 SBML MML
cpb00310 Chlorobium phaeobacteroides BS1 SBML MML
cpe00310 Clostridium perfringens 13 SBML MML
cpf00310 Clostridium perfringens ATCC 13124 SBML MML
cpj00310 Chlamydophila pneumoniae J138 SBML MML
cpn00310 Chlamydophila pneumoniae CWL029 SBML MML
cpr00310 Clostridium perfringens SM101 SBML MML
cps00310 Colwellia psychrerythraea SBML MML
cpt00310 Chlamydophila pneumoniae TW183 SBML MML
cpy00310 Clostridium phytofermentans SBML MML
cre00310 Chlamydomonas reinhardtii SBML MML
csa00310 Chromohalobacter salexigens SBML MML
csc00310 Caldicellulosiruptor saccharolyticus SBML MML
cta00310 Chlamydia trachomatis A/HAR-13 (serovar A) SBML MML
ctb00310 Chlamydia trachomatis 434/Bu SBML MML
ctc00310 Clostridium tetani E88 SBML MML
cti00310 Cupriavidus taiwanensis SBML MML
ctl00310 Chlamydia trachomatis L2b/UCH-1/proctitis SBML MML
ctr00310 Chlamydia trachomatis D/UW-3/CX (serovar D) SBML MML
cur00310 Corynebacterium urealyticum SBML MML
cvi00310 Chromobacterium violaceum SBML MML
cyt00310 Cyanothece sp. ATCC 51142 SBML MML
daag00310 (Undocumented) SBML MML
dac00310 Delftia acidovorans SBML MML
dame00310 (Undocumented) SBML MML
dar00310 Dechloromonas aromatica SBML MML
dau00310 Candidatus Desulforudis audaxviator SBML MML
dbmo00310 Bombyx mori (silkmoth) SBML MML
dcbr00310 (Undocumented) SBML MML
dcin00310 (Undocumented) SBML MML
dde00310 Desulfovibrio desulfuricans G20 SBML MML
ddi00310 Dictyostelium discoideum SBML MML
decb00310 (Undocumented) SBML MML
dfru00310 Fugu rubripes (Japanese puffer fish) SBML MML
dge00310 Deinococcus geothermalis SBML MML
dha00310 Debaryomyces hansenii SBML MML
dkwa00310 Kluyveromyces waltii SBML MML
dme00310 Drosophila melanogaster (fruit fly) SBML MML
dno00310 Dichelobacter nodosus SBML MML
dol00310 Candidatus Desulfococcus oleovorans SBML MML
dola00310 Oryzias latipes (Japanese medaka) SBML MML
dota00310 Ostreococcus tauri SBML MML
dpkn00310 (Undocumented) SBML MML
dpo00310 Drosophila pseudoobscura pseudoobscura SBML MML
dpop00310 (Undocumented) SBML MML
dps00310 Desulfotalea psychrophila SBML MML
dptm00310 (Undocumented) SBML MML
dra00310 Deinococcus radiodurans SBML MML
dre00310 Danio rerio (zebrafish) SBML MML
drm00310 Desulfotomaculum reducens SBML MML
dsba00310 Saccharomyces bayanus SBML MML
dsh00310 Dinoroseobacter shibae SBML MML
dsmi00310 Saccharomyces mikatae SBML MML
dspd00310 (Undocumented) SBML MML
dsy00310 Desulfitobacterium hafniense Y51 SBML MML
dtni00310 Tetraodon nigroviridis (green spotted puffer) SBML MML
dtps00310 (Undocumented) SBML MML
dvvi00310 (Undocumented) SBML MML
eacp00310 (Undocumented) SBML MML
eath00310 Arabidopsis thaliana (thale cress) (EST) SBML MML
eba00310 Aromatoleum aromaticum EbN1 SBML MML
ebna00310 Brassica napus (rape) (EST) SBML MML
ebvl00310 Beta vulgaris (beet) (EST) SBML MML
eca00310 Erwinia carotovora SBML MML
ecan00310 Capsicum annuum (chile pepper) (EST) SBML MML
ecc00310 Escherichia coli CFT073 (UPEC) SBML MML
ecd00310 Escherichia coli K-12 DH10B SBML MML
ece00310 Escherichia coli O157 EDL933 (EHEC) SBML MML
ech00310 Ehrlichia chaffeensis SBML MML
eci00310 Escherichia coli UTI89 (UPEC) SBML MML
ecj00310 Escherichia coli K-12 W3110 SBML MML
ecl00310 Escherichia coli ATCC 8739 SBML MML
ecm00310 Escherichia coli SECEC SBML MML
ecn00310 Ehrlichia canis SBML MML
eco00310 Escherichia coli K-12 MG1655 SBML MML
ecp00310 Escherichia coli 536 (UPEC) SBML MML
ecs00310 Escherichia coli O157 Sakai (EHEC) SBML MML
ecsi00310 Citrus sinensis (Valencia orange) (EST) SBML MML
ecsv00310 Ciona savignyi (EST) SBML MML
ecv00310 Escherichia coli APEC O1 SBML MML
ecw00310 Escherichia coli E24377A SBML MML
ecx00310 Escherichia coli HS SBML MML
eees00310 Euphorbia esula (leafy spurge) (EST) SBML MML
efar00310 Festuca arundinacea (tall fescue) (EST) SBML MML
egar00310 Gossypium arboreum (tree cotton) (EST) SBML MML
eghi00310 Gossypium hirsutum (upland cotton) (EST) SBML MML
egma00310 Glycine max (soybean) (EST) SBML MML
egra00310 Gossypium raimondii (EST) SBML MML
ehan00310 Helianthus annuus (sunflower) (EST) SBML MML
ehvu00310 Hordeum vulgare (barley) (EST) SBML MML
eini00310 Ipomoea nil (Japanese morning glory) (EST) SBML MML
eli00310 Erythrobacter litoralis SBML MML
elja00310 Lotus japonicus (lotus) (EST) SBML MML
elpe00310 Lactuca perennis (blue lettuce) (EST) SBML MML
elsi00310 Lactuca saligna (willow-leaf lettuce) (EST) SBML MML
elst00310 Lactuca sativa (lettuce) (EST) SBML MML
elvi00310 Lactuca virosa (wild lettuce) (EST) SBML MML
emec00310 Manihot esculenta (cassava) (EST) SBML MML
emte00310 Molgula tectiformis (EST) SBML MML
emtr00310 Medicago truncatula (barrel medic) (EST) SBML MML
enbe00310 Nicotiana benthamiana (EST) SBML MML
ent00310 Enterobacter sp. 638 SBML MML
enta00310 Nicotiana tabacum (tobacco) (EST) SBML MML
eosa00310 Oryza sativa (rice) (EST) SBML MML
eosi00310 Oryza sativa indica (Indian rice) (EST) SBML MML
eosj00310 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00310 Picea glauca (white spruce) (EST) SBML MML
epop00310 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00310 (Undocumented) SBML MML
eppi00310 Pinus pinaster (maritime pine) (EST) SBML MML
eppp00310 Physcomitrella patens subsp. patens (EST) SBML MML
epps00310 Prunus persica (peach) (EST) SBML MML
epsi00310 Picea sitchensis (sitka spruce) (EST) SBML MML
epta00310 Pinus taeda (loblolly pine) (EST) SBML MML
eptp00310 Populus tremula (European aspen) (EST) SBML MML
erg00310 Ehrlichia ruminantium Gardel SBML MML
eru00310 Ehrlichia ruminantium Welgevonden (South Africa) SBML MML
erw00310 Ehrlichia ruminantium Welgevonden (France) SBML MML
esa00310 Enterobacter sakazakii SBML MML
esbi00310 Sorghum bicolor (sorghum) (EST) SBML MML
esi00310 Exiguobacterium sibiricum SBML MML
esja00310 Schistosoma japonicum (fluke) (EST) SBML MML
esly00310 Solanum lycopersicum (tomato) (EST) SBML MML
esof00310 Saccharum officinarum (sugarcane) (EST) SBML MML
espp00310 (Undocumented) SBML MML
espu00310 Strongylocentrotus purpuratus (purple sea urchin) (EST) SBML MML
estu00310 Solanum tuberosum (potato) (EST) SBML MML
eta00310 Erwinia tasmaniensis SBML MML
etae00310 Triticum aestivum (wheat) (EST) SBML MML
evvi00310 Vitis vinifera (wine grape) (EST) SBML MML
ezel00310 (Undocumented) SBML MML
ezma00310 Zea mays (maize) (EST) SBML MML
fal00310 Frankia alni SBML MML
fgr00310 Fusarium graminearum SBML MML
fjo00310 Flavobacterium johnsoniae SBML MML
fma00310 Finegoldia magna SBML MML
fno00310 Fervidobacterium nodosum SBML MML
fnu00310 Fusobacterium nucleatum SBML MML
fph00310 Francisella philomiragia SBML MML
fps00310 Flavobacterium psychrophilum SBML MML
fra00310 Frankia sp. CcI3 SBML MML
fre00310 Frankia sp. EAN1pec SBML MML
fta00310 Francisella tularensis subsp. holarctica FTNF002-00 SBML MML
ftf00310 Francisella tularensis subsp. tularensis FSC 198 SBML MML
fth00310 Francisella tularensis subsp. holarctica OSU18 SBML MML
ftl00310 Francisella tularensis subsp. holarctica LVS SBML MML
ftm00310 Francisella tularensis subsp. mediasiatica FSC147 SBML MML
ftn00310 Francisella tularensis subsp. novicida U112 SBML MML
ftu00310 Francisella tularensis subsp. tularensis SCHU S4 SBML MML
ftw00310 Francisella tularensis subsp. tularensis WY96-3418 SBML MML
gbe00310 Granulobacter bethesdensis SBML MML
gdi00310 Gluconacetobacter diazotrophicus PAl 5 (Brazil) SBML MML
gfo00310 Gramella forsetii SBML MML
gga00310 Gallus gallus (chicken) SBML MML
gka00310 Geobacillus kaustophilus SBML MML
gla00310 Giardia lamblia SBML MML
glo00310 Geobacter lovleyi SBML MML
gme00310 Geobacter metallireducens SBML MML
gox00310 Gluconobacter oxydans SBML MML
gsu00310 Geobacter sulfurreducens SBML MML
gur00310 Geobacter uraniumreducens SBML MML
gvi00310 Gloeobacter violaceus SBML MML
hac00310 Helicobacter acinonychis SBML MML
hal00310 Halobacterium sp. NRC-1 SBML MML
har00310 Herminiimonas arsenicoxydans SBML MML
hau00310 Herpetosiphon aurantiacus SBML MML
hch00310 Hahella chejuensis SBML MML
hdu00310 Haemophilus ducreyi SBML MML
hha00310 Halorhodospira halophila SBML MML
hhe00310 Helicobacter hepaticus SBML MML
hip00310 Haemophilus influenzae PittEE SBML MML
hiq00310 Haemophilus influenzae PittGG SBML MML
hit00310 Haemophilus influenzae 86-028NP (nontypeable) SBML MML
hma00310 Haloarcula marismortui SBML MML
hmo00310 Heliobacterium modesticaldum SBML MML
hne00310 Hyphomonas neptunium SBML MML
hpa00310 Helicobacter pylori HPAG1 SBML MML
hpj00310 Helicobacter pylori J99 SBML MML
hpy00310 Helicobacter pylori 26695 SBML MML
hsa00310 Homo sapiens (human) SBML MML
hsl00310 Halobacterium salinarum R1 SBML MML
hsm00310 Haemophilus somnus 2336 SBML MML
hso00310 Haemophilus somnus 129PT SBML MML
hwa00310 Haloquadratum walsbyi SBML MML
iho00310 Ignicoccus hospitalis SBML MML
ilo00310 Idiomarina loihiensis SBML MML
jan00310 Jannaschia sp. CCS1 SBML MML
kcr00310 Candidatus Korarchaeum cryptofilum SBML MML
kla00310 Kluyveromyces lactis SBML MML
kpn00310 Klebsiella pneumoniae SBML MML
kra00310 Kineococcus radiotolerans SBML MML
krh00310 Kocuria rhizophila SBML MML
lac00310 Lactobacillus acidophilus SBML MML
lbc00310 Laccaria bicolor SBML MML
lbf00310 Leptospira biflexa serovar Patoc Patoc 1 (Ames) SBML MML
lbi00310 Leptospira biflexa serovar Patoc Patoc 1 (Paris) SBML MML
lbj00310 Leptospira borgpetersenii JB197 SBML MML
lbl00310 Leptospira borgpetersenii L550 SBML MML
lbr00310 Lactobacillus brevis SBML MML
lch00310 Leptothrix cholodnii SBML MML
ldb00310 Lactobacillus delbrueckii ATCC 11842 SBML MML
lga00310 Lactobacillus gasseri SBML MML
lhe00310 Lactobacillus helveticus SBML MML
lic00310 Leptospira interrogans serovar Copenhageni SBML MML
lil00310 Leptospira interrogans serovar lai SBML MML
lin00310 Listeria innocua SBML MML
ljo00310 Lactobacillus johnsonii SBML MML
lma00310 Leishmania major SBML MML
lmf00310 Listeria monocytogenes F2365 SBML MML
lmo00310 Listeria monocytogenes EGD-e SBML MML
lpc00310 Legionella pneumophila Corby SBML MML
lpf00310 Legionella pneumophila Lens SBML MML
lpl00310 Lactobacillus plantarum WCFS1 SBML MML
lpn00310 Legionella pneumophila Philadelphia 1 SBML MML
lpp00310 Legionella pneumophila Paris SBML MML
lre00310 Lactobacillus reuteri DSM 20016 SBML MML
lsa00310 Lactobacillus sakei SBML MML
lsp00310 Lysinibacillus sphaericus SBML MML
lwe00310 Listeria welshimeri SLCC5334 SBML MML
lxx00310 Leifsonia xyli xyli CTCB07 SBML MML
mab00310 Mycobacterium abscessus ATCC 19977T SBML MML
mac00310 Methanosarcina acetivorans SBML MML
mag00310 Magnetospirillum magneticum SBML MML
maq00310 Marinobacter aquaeolei SBML MML
mar00310 Microcystis aeruginosa SBML MML
mav00310 Mycobacterium avium 104 SBML MML
mba00310 Methanosarcina barkeri SBML MML
mbb00310 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbo00310 Mycobacterium bovis AF2122/97 SBML MML
mbr00310 Monosiga brevicollis SBML MML
mca00310 Methylococcus capsulatus SBML MML
mcc00310 Macaca mulatta (rhesus monkey) SBML MML
mdo00310 Monodelphis domestica (opossum) SBML MML
mem00310 Methanoculleus marisnigri SBML MML
mes00310 Mesorhizobium sp. BNC1 SBML MML
met00310 Methylobacterium sp. 4-46 SBML MML
mex00310 Methylobacterium extorquens SBML MML
mfa00310 Methylobacillus flagellatus SBML MML
mgi00310 Mycobacterium gilvum SBML MML
mgl00310 Malassezia globosa SBML MML
mgm00310 Magnetococcus sp. MC-1 SBML MML
mgr00310 Magnaporthe grisea SBML MML
mjl00310 Mycobacterium sp. JLS SBML MML
mkm00310 Mycobacterium sp. KMS SBML MML
mle00310 Mycobacterium leprae TN SBML MML
mlo00310 Mesorhizobium loti SBML MML
mma00310 Methanosarcina mazei SBML MML
mmc00310 Mycobacterium sp. MCS SBML MML
mmi00310 Mycobacterium marinum M SBML MML
mmr00310 Maricaulis maris SBML MML
mms00310 Minibacterium massiliensis SBML MML
mmu00310 Mus musculus (mouse) SBML MML
mmw00310 Marinomonas sp. MWYL1 SBML MML
mpa00310 Mycobacterium avium paratuberculosis SBML MML
mpt00310 Methylibium petroleiphilum SBML MML
mra00310 Mycobacterium tuberculosis H37Ra SBML MML
mrd00310 Methylobacterium radiotolerans SBML MML
mse00310 Metallosphaera sedula SBML MML
msm00310 Mycobacterium smegmatis SBML MML
msu00310 Mannheimia succiniciproducens SBML MML
mta00310 Moorella thermoacetica SBML MML
mtc00310 Mycobacterium tuberculosis CDC1551 SBML MML
mtf00310 Mycobacterium tuberculosis F11 SBML MML
mtu00310 Mycobacterium tuberculosis H37Rv SBML MML
mul00310 Mycobacterium ulcerans SBML MML
mva00310 Mycobacterium vanbaalenii SBML MML
mxa00310 Myxococcus xanthus SBML MML
nar00310 Novosphingobium aromaticivorans SBML MML
nca00310 Nocardioides sp. JS614 SBML MML
ncr00310 Neurospora crassa SBML MML
net00310 Nitrosomonas eutropha SBML MML
neu00310 Nitrosomonas europaea SBML MML
nfa00310 Nocardia farcinica SBML MML
ngo00310 Neisseria gonorrhoeae SBML MML
nha00310 Nitrobacter hamburgensis SBML MML
nis00310 Nitratiruptor sp. SB155-2 SBML MML
nma00310 Neisseria meningitidis Z2491 (serogroup A) SBML MML
nmc00310 Neisseria meningitidis FAM18 (serogroup C) SBML MML
nme00310 Neisseria meningitidis MC58 (serogroup B) SBML MML
nmn00310 Neisseria meningitidis 053442 (serogroup C) SBML MML
nmr00310 Nitrosopumilus maritimus SBML MML
nmu00310 Nitrosospira multiformis SBML MML
noc00310 Nitrosococcus oceani SBML MML
nph00310 Natronomonas pharaonis SBML MML
npu00310 Nostoc punctiforme SBML MML
nse00310 Neorickettsia sennetsu SBML MML
nve00310 Nematostella vectensis (sea anemone) SBML MML
nwi00310 Nitrobacter winogradskyi SBML MML
oaa00310 Ornithorhynchus anatinus (platypus) SBML MML
oan00310 Ochrobactrum anthropi SBML MML
oih00310 Oceanobacillus iheyensis SBML MML
olu00310 Ostreococcus lucimarinus SBML MML
osa00310 Oryza sativa japonica (Japanese rice) SBML MML
ote00310 Opitutus terrae SBML MML
ots00310 Orientia tsutsugamushi Boryong SBML MML
ott00310 Orientia tsutsugamushi Ikeda SBML MML
pac00310 Propionibacterium acnes SBML MML
pae00310 Pseudomonas aeruginosa PAO1 SBML MML
pai00310 Pyrobaculum aerophilum SBML MML
pan00310 Podospora anserina SBML MML
pap00310 Pseudomonas aeruginosa PA7 SBML MML
par00310 Psychrobacter arcticum SBML MML
pas00310 Pyrobaculum arsenaticum SBML MML
pat00310 Pseudoalteromonas atlantica SBML MML
pau00310 Pseudomonas aeruginosa UCBPP-PA14 SBML MML
pca00310 Pelobacter carbinolicus SBML MML
pcl00310 Pyrobaculum calidifontis SBML MML
pcr00310 Psychrobacter cryohalolentis SBML MML
pcu00310 Candidatus Protochlamydia amoebophila SBML MML
pde00310 Paracoccus denitrificans SBML MML
pen00310 Pseudomonas entomophila SBML MML
pfa00310 Plasmodium falciparum 3D7 SBML MML
pfl00310 Pseudomonas fluorescens Pf-5 SBML MML
pfo00310 Pseudomonas fluorescens Pf0-1 SBML MML
pgi00310 Porphyromonas gingivalis W83 SBML MML
pgn00310 Porphyromonas gingivalis ATCC 33277 SBML MML
pha00310 Pseudoalteromonas haloplanktis SBML MML
pic00310 Pichia stipitis SBML MML
pin00310 Psychromonas ingrahamii SBML MML
pis00310 Pyrobaculum islandicum SBML MML
pla00310 Parvibaculum lavamentivorans SBML MML
plu00310 Photorhabdus luminescens SBML MML
pma00310 Prochlorococcus marinus SS120 SBML MML
pmb00310 Prochlorococcus marinus AS9601 SBML MML
pmc00310 Prochlorococcus marinus MIT 9515 SBML MML
pme00310 Prochlorococcus marinus NATL1A SBML MML
pmf00310 Prochlorococcus marinus MIT 9303 SBML MML
pmg00310 Prochlorococcus marinus MIT 9301 SBML MML
pmh00310 Prochlorococcus marinus MIT 9215 SBML MML
pmi00310 Prochlorococcus marinus MIT9312 SBML MML
pmj00310 Prochlorococcus marinus MIT 9211 SBML MML
pmm00310 Prochlorococcus marinus MED4 SBML MML
pmn00310 Prochlorococcus marinus NATL2A SBML MML
pmo00310 Petrotoga mobilis SBML MML
pmt00310 Prochlorococcus marinus MIT9313 SBML MML
pmu00310 Pasteurella multocida SBML MML
pmy00310 Pseudomonas mendocina SBML MML
pna00310 Polaromonas naphthalenivorans SBML MML
pne00310 Polynucleobacter necessarius SBML MML
pnu00310 Polynucleobacter sp. QLW-P1DMWA-1 SBML MML
pol00310 Polaromonas sp. JS666 SBML MML
ppf00310 Pseudomonas putida F1 SBML MML
ppg00310 Pseudomonas putida GB-1 SBML MML
ppp00310 Physcomitrella patens subsp. patens SBML MML
ppr00310 Photobacterium profundum SBML MML
ppu00310 Pseudomonas putida KT2440 SBML MML
ppw00310 Pseudomonas putida W619 SBML MML
prw00310 Psychrobacter sp. PRwf-1 SBML MML
psa00310 Pseudomonas stutzeri SBML MML
psb00310 Pseudomonas syringae pv. syringae B728a SBML MML
psp00310 Pseudomonas syringae pv. phaseolicola 1448A SBML MML
pst00310 Pseudomonas syringae pv. tomato DC3000 SBML MML
pth00310 Pelotomaculum thermopropionicum SBML MML
pto00310 Picrophilus torridus SBML MML
ptr00310 Pan troglodytes (chimpanzee) SBML MML
pub00310 Candidatus Pelagibacter ubique SBML MML
pyo00310 Plasmodium yoelii SBML MML
rak00310 Rickettsia akari SBML MML
rba00310 Rhodopirellula baltica SBML MML
rbe00310 Rickettsia bellii RML369-C SBML MML
rbo00310 Rickettsia bellii OSU 85-389 SBML MML
rca00310 Roseiflexus castenholzii DSM13941 SBML MML
rcm00310 Rickettsia canadensis SBML MML
rco00310 Rickettsia conorii SBML MML
rde00310 Roseobacter denitrificans SBML MML
rec00310 Rhizobium etli CIAT 652 SBML MML
reh00310 Ralstonia eutropha H16 SBML MML
ret00310 Rhizobium etli CFN 42 SBML MML
reu00310 Ralstonia eutropha JMP134 SBML MML
rfe00310 Rickettsia felis SBML MML
rfr00310 Rhodoferax ferrireducens SBML MML
rha00310 Rhodococcus sp. RHA1 SBML MML
rle00310 Rhizobium leguminosarum SBML MML
rma00310 Candidatus Ruthia magnifica SBML MML
rme00310 Ralstonia metallidurans SBML MML
rms00310 Rickettsia massiliae SBML MML
rno00310 Rattus norvegicus (rat) SBML MML
rpa00310 Rhodopseudomonas palustris CGA009 SBML MML
rpb00310 Rhodopseudomonas palustris HaA2 SBML MML
rpc00310 Rhodopseudomonas palustris BisB18 SBML MML
rpd00310 Rhodopseudomonas palustris BisB5 SBML MML
rpe00310 Rhodopseudomonas palustris BisA53 SBML MML
rpr00310 Rickettsia prowazekii SBML MML
rpt00310 Rhodopseudomonas palustris TIE-1 SBML MML
rri00310 Rickettsia rickettsii Sheila Smith SBML MML
rrj00310 Rickettsia rickettsii Iowa SBML MML
rrs00310 Roseiflexus sp. RS-1 SBML MML
rru00310 Rhodospirillum rubrum SBML MML
rsa00310 Renibacterium salmoninarum SBML MML
rsh00310 Rhodobacter sphaeroides ATCC 17029 SBML MML
rso00310 Ralstonia solanacearum SBML MML
rsp00310 Rhodobacter sphaeroides 2.4.1 SBML MML
rsq00310 Rhodobacter sphaeroides ATCC 17025 SBML MML
rty00310 Rickettsia typhi SBML MML
rxy00310 Rubrobacter xylanophilus SBML MML
saa00310 Staphylococcus aureus USA300 SBML MML
sab00310 Staphylococcus aureus RF122 SBML MML
sac00310 Staphylococcus aureus COL SBML MML
sae00310 Staphylococcus aureus Newman SBML MML
sah00310 Staphylococcus aureus JH1 SBML MML
sai00310 Sulfolobus acidocaldarius SBML MML
saj00310 Staphylococcus aureus JH9 SBML MML
sak00310 Streptococcus agalactiae A909 (serotype Ia) SBML MML
sal00310 Sphingopyxis alaskensis SBML MML
sam00310 Staphylococcus aureus MW2 SBML MML
sao00310 Staphylococcus aureus NCTC8325 SBML MML
saq00310 Salinispora arenicola SBML MML
sar00310 Staphylococcus aureus MRSA252 SBML MML
sas00310 Staphylococcus aureus MSSA476 SBML MML
sat00310 Syntrophus aciditrophicus SBML MML
sau00310 Staphylococcus aureus N315 SBML MML
sav00310 Staphylococcus aureus Mu50 SBML MML
saw00310 Staphylococcus aureus Mu3 SBML MML
sax00310 Staphylococcus aureus USA300 TCH1516 SBML MML
saz00310 Shewanella amazonensis SBML MML
sbc00310 Shigella boydii CDC 3083-94 SBML MML
sbl00310 Shewanella baltica OS155 SBML MML
sbm00310 Shewanella baltica OS185 SBML MML
sbn00310 Shewanella baltica OS195 SBML MML
sbo00310 Shigella boydii Sb227 SBML MML
sce00310 Saccharomyces cerevisiae SBML MML
scl00310 Sorangium cellulosum SBML MML
sco00310 Streptomyces coelicolor SBML MML
sde00310 Saccharophagus degradans SBML MML
sdn00310 Shewanella denitrificans SBML MML
sdy00310 Shigella dysenteriae SBML MML
sec00310 Salmonella enterica subsp. enterica serovar Choleraesuis SBML MML
sen00310 Saccharopolyspora erythraea SBML MML
sep00310 Staphylococcus epidermidis ATCC 12228 SBML MML
ser00310 Staphylococcus epidermidis RP62A SBML MML
ses00310 Salmonella enterica subsp. arizonae SBML MML
sfl00310 Shigella flexneri 301 (serotype 2a) SBML MML
sfr00310 Shewanella frigidimarina SBML MML
sfu00310 Syntrophobacter fumaroxidans SBML MML
sfv00310 Shigella flexneri 8401 (serotype 5b) SBML MML
sfx00310 Shigella flexneri 2457T (serotype 2a) SBML MML
sgl00310 Sodalis glossinidius SBML MML
sgr00310 Streptomyces griseus SBML MML
sha00310 Staphylococcus haemolyticus SBML MML
she00310 Shewanella sp. MR-4 SBML MML
shl00310 Shewanella halifaxensis SBML MML
shm00310 Shewanella sp. MR-7 SBML MML
shn00310 Shewanella sp. ANA-3 SBML MML
shw00310 Shewanella sp. W3-18-1 SBML MML
sil00310 Ruegeria pomeroyi SBML MML
sit00310 Silicibacter sp. TM1040 SBML MML
slo00310 Shewanella loihica SBML MML
sma00310 Streptomyces avermitilis SBML MML
smd00310 Sinorhizobium medicae SBML MML
sme00310 Sinorhizobium meliloti SBML MML
smg00310 Candidatus Sulcia muelleri GWSS SBML MML
sml00310 Stenotrophomonas maltophilia SBML MML
son00310 Shewanella oneidensis SBML MML
spa00310 Streptococcus pyogenes MGAS10394 (serotype M6) SBML MML
spb00310 Streptococcus pyogenes MGAS6180 (serotype M28) SBML MML
spc00310 Shewanella putrefaciens SBML MML
spd00310 Streptococcus pneumoniae D39 SBML MML
spe00310 Serratia proteamaculans SBML MML
spf00310 Streptococcus pyogenes Manfredo (serotype M5) SBML MML
spg00310 Streptococcus pyogenes MGAS315 (serotype M3) SBML MML
sph00310 Streptococcus pyogenes MGAS10270 (serotype M2) SBML MML
spi00310 Streptococcus pyogenes MGAS10750 (serotype M4) SBML MML
spj00310 Streptococcus pyogenes MGAS2096 (serotype M12) SBML MML
spk00310 Streptococcus pyogenes MGAS9429 (serotype M12) SBML MML
spl00310 Shewanella pealeana SBML MML
spm00310 Streptococcus pyogenes MGAS8232 (serotype M18) SBML MML
spn00310 Streptococcus pneumoniae TIGR4 SBML MML
spo00310 Schizosaccharomyces pombe SBML MML
spq00310 Salmonella enterica subsp. enterica serovar Paratyphi B SBML MML
spr00310 Streptococcus pneumoniae R6 SBML MML
sps00310 Streptococcus pyogenes SSI-1 (serotype M3) SBML MML
spt00310 Salmonella enterica subsp. enterica serovar Paratyphi A SBML MML
spu00310 Strongylocentrotus purpuratus (purple sea urchin) SBML MML
spv00310 Streptococcus pneumoniae Hungary19A 6 SBML MML
spw00310 Streptococcus pneumoniae CGSP14 (serotype 14) SBML MML
spy00310 Streptococcus pyogenes SF370 (serotype M1) SBML MML
spz00310 Streptococcus pyogenes MGAS5005 (serotype M1) SBML MML
sru00310 Salinibacter ruber SBML MML
ssc00310 Sus scrofa (pig) SBML MML
sse00310 Shewanella sediminis SBML MML
ssn00310 Shigella sonnei SBML MML
sso00310 Sulfolobus solfataricus SBML MML
ssp00310 Staphylococcus saprophyticus SBML MML
ssu00310 Streptococcus suis 05ZYH33 SBML MML
ssv00310 Streptococcus suis 98HAH33 SBML MML
sth00310 Symbiobacterium thermophilum SBML MML
stm00310 Salmonella typhimurium LT2 SBML MML
sto00310 Sulfolobus tokodaii SBML MML
stp00310 Salinispora tropica SBML MML
stt00310 Salmonella enterica subsp. enterica serovar Typhi Ty2 SBML MML
sty00310 Salmonella enterica subsp. enterica serovar Typhi CT18 SBML MML
sun00310 Sulfurovum sp. NBC37-1 SBML MML
sus00310 Solibacter usitatus SBML MML
swd00310 Shewanella woodyi ATCC 51908 SBML MML
swi00310 Sphingomonas wittichii SBML MML
swo00310 Syntrophomonas wolfei SBML MML
syc00310 Synechococcus elongatus PCC6301 SBML MML
syd00310 Synechococcus sp. CC9605 SBML MML
sye00310 Synechococcus sp. CC9902 SBML MML
syf00310 Synechococcus elongatus PCC7942 SBML MML
syg00310 Synechococcus sp. CC9311 SBML MML
syn00310 Synechocystis sp. PCC6803 SBML MML
syr00310 Synechococcus sp. RCC307 SBML MML
syw00310 Synechococcus sp. WH8102 SBML MML
syx00310 Synechococcus sp. WH7803 SBML MML
tac00310 Thermoplasma acidophilum SBML MML
tan00310 Theileria annulata SBML MML
tbd00310 Thiobacillus denitrificans SBML MML
tbr00310 Trypanosoma brucei SBML MML
tca00310 Tribolium castaneum (red flour beetle) SBML MML
tcr00310 Trypanosoma cruzi SBML MML
tcx00310 Thiomicrospira crunogena SBML MML
ter00310 Trichodesmium erythraeum SBML MML
tet00310 Tetrahymena thermophila SBML MML
tfu00310 Thermobifida fusca SBML MML
tle00310 Thermotoga lettingae SBML MML
tme00310 Thermosipho melanesiensis SBML MML
tne00310 Thermoproteus neutrophilus SBML MML
tpv00310 Theileria parva SBML MML
tte00310 Thermoanaerobacter tengcongensis SBML MML
tth00310 Thermus thermophilus HB27 SBML MML
ttj00310 Thermus thermophilus HB8 SBML MML
tva00310 Trichomonas vaginalis SBML MML
tvo00310 Thermoplasma volcanium SBML MML
uma00310 Ustilago maydis SBML MML
vch00310 Vibrio cholerae O1 SBML MML
vco00310 Vibrio cholerae O395 SBML MML
vei00310 Verminephrobacter eiseniae SBML MML
vfi00310 Vibrio fischeri SBML MML
vha00310 Vibrio harveyi SBML MML
vok00310 Candidatus Vesicomyosocius okutanii SBML MML
vpa00310 Vibrio parahaemolyticus SBML MML
vpo00310 Vanderwaltozyma polyspora SBML MML
vvu00310 Vibrio vulnificus CMCP6 SBML MML
vvy00310 Vibrio vulnificus YJ016 SBML MML
wbm00310 Wolbachia wBm SBML MML
wbr00310 Wigglesworthia glossinidia SBML MML
wol00310 Wolbachia wMel SBML MML
wpi00310 Wolbachia pipientis SBML MML
xac00310 Xanthomonas axonopodis SBML MML
xau00310 Xanthobacter autotrophicus SBML MML
xcb00310 Xanthomonas campestris pv. campestris 8004 SBML MML
xcc00310 Xanthomonas campestris pv. campestris ATCC 33913 SBML MML
xcv00310 Xanthomonas campestris pv. vesicatoria SBML MML
xfa00310 Xylella fastidiosa 9a5c SBML MML
xfm00310 Xylella fastidiosa M12 SBML MML
xfn00310 Xylella fastidiosa M23 SBML MML
xft00310 Xylella fastidiosa Temecula1 SBML MML
xla00310 Xenopus laevis (African clawed frog) SBML MML
xom00310 Xanthomonas oryzae MAFF311018 SBML MML
xoo00310 Xanthomonas oryzae KACC10331 SBML MML
xtr00310 Xenopus tropicalis (western clawed frog) SBML MML
yen00310 Yersinia enterocolitica SBML MML
yli00310 Yarrowia lipolytica SBML MML
ypa00310 Yersinia pestis Antiqua SBML MML
ype00310 Yersinia pestis CO92 SBML MML
ypg00310 Yersinia pestis Angola SBML MML
ypi00310 Yersinia pseudotuberculosis IP31758 SBML MML
ypk00310 Yersinia pestis KIM SBML MML
ypm00310 Yersinia pestis Mediaevails SBML MML
ypn00310 Yersinia pestis Nepal516 SBML MML
ypp00310 Yersinia pestis Pestoides SBML MML
yps00310 Yersinia pseudotuberculosis IP32953 SBML MML
ypy00310 Yersinia pseudotuberculosis YPIII SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.