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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00281: Geraniol degradation

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aau00281 Arthrobacter aurescens SBML MML
aav00281 Acidovorax avenae SBML MML
aba00281 Acidobacteria bacterium SBML MML
abc00281 Acinetobacter baumannii ACICU SBML MML
abm00281 Acinetobacter baumannii SDF SBML MML
abo00281 Alcanivorax borkumensis SBML MML
aby00281 Acinetobacter baumannii AYE SBML MML
acb00281 Acinetobacter baumannii ATCC 17978 SBML MML
ace00281 Acidothermus cellulolyticus SBML MML
aci00281 Acinetobacter sp. ADP1 SBML MML
acl00281 Acholeplasma laidlawii SBML MML
acr00281 Acidiphilium cryptum JF-5 SBML MML
ade00281 Anaeromyxobacter dehalogenans 2CP-C SBML MML
aeh00281 Alkalilimnicola ehrlichei SBML MML
afm00281 Aspergillus fumigatus SBML MML
afu00281 Archaeoglobus fulgidus SBML MML
afw00281 Anaeromyxobacter sp. Fw109-5 SBML MML
aga00281 Anopheles gambiae (mosquito) SBML MML
ago00281 Ashbya gossypii (Eremothecium gossypii) SBML MML
aha00281 Aeromonas hydrophila SBML MML
ajs00281 Acidovorax sp. JS42 SBML MML
amr00281 Acaryochloris marina SBML MML
ang00281 Aspergillus niger SBML MML
ani00281 Aspergillus nidulans SBML MML
aoe00281 Alkaliphilus oremlandii SBML MML
aor00281 Aspergillus oryzae SBML MML
apa00281 Actinobacillus pleuropneumoniae AP76 (serotype 7) SBML MML
ape00281 Aeropyrum pernix SBML MML
aph00281 Anaplasma phagocytophilum SBML MML
apj00281 Actinobacillus pleuropneumoniae JL03 (serotype 3) SBML MML
apl00281 Actinobacillus pleuropneumoniae L20 (serotype 5b) SBML MML
art00281 Arthrobacter sp. FB24 SBML MML
asa00281 Aeromonas salmonicida SBML MML
atc00281 Agrobacterium tumefaciens C58 (Cereon) SBML MML
ath00281 Arabidopsis thaliana (thale cress) SBML MML
atu00281 Agrobacterium tumefaciens C58 SBML MML
azc00281 Azorhizobium caulinodans SBML MML
azo00281 Azoarcus sp. BH72 SBML MML
baa00281 Bacillus anthracis A2012 SBML MML
bac00281 Burkholderia ambifaria MC40-6 SBML MML
bam00281 Burkholderia cepacia SBML MML
ban00281 Bacillus anthracis Ames SBML MML
bar00281 Bacillus anthracis Ames 0581 SBML MML
bat00281 Bacillus anthracis Sterne SBML MML
bav00281 Bordetella avium SBML MML
bay00281 Bacillus amyloliquefaciens SBML MML
bba00281 Bdellovibrio bacteriovorus SBML MML
bbr00281 Bordetella bronchiseptica SBML MML
bbt00281 Bradyrhizobium sp. BTAi1 SBML MML
bca00281 Bacillus cereus ATCC 10987 SBML MML
bce00281 Bacillus cereus ATCC 14579 SBML MML
bch00281 Burkholderia cenocepacia HI2424 SBML MML
bcl00281 Bacillus clausii SBML MML
bcm00281 Burkholderia cenocepacia MC0-3 SBML MML
bcn00281 Burkholderia cenocepacia AU1054 SBML MML
bcs00281 Brucella canis SBML MML
bcy00281 Bacillus cytotoxis NVH 391-98 SBML MML
bcz00281 Bacillus cereus ZK SBML MML
bfr00281 Bacteroides fragilis YCH46 SBML MML
bfs00281 Bacteroides fragilis NCTC9343 SBML MML
bha00281 Bacillus halodurans SBML MML
bid00281 Beijerinckia indica SBML MML
bja00281 Bradyrhizobium japonicum SBML MML
bld00281 Bacillus licheniformis DSM13 SBML MML
bli00281 Bacillus licheniformis ATCC 14580 SBML MML
bma00281 Burkholderia mallei ATCC 23344 SBML MML
bmb00281 Brucella abortus 9-941 SBML MML
bmc00281 Brucella abortus S19 SBML MML
bme00281 Brucella melitensis 16M SBML MML
bmf00281 Brucella melitensis biovar Abortus SBML MML
bml00281 Burkholderia mallei NCTC 10229 SBML MML
bmn00281 Burkholderia mallei NCTC 10247 SBML MML
bms00281 Brucella suis 1330 SBML MML
bmt00281 Brucella suis ATCC 23445 SBML MML
bmu00281 Burkholderia multivorans ATCC 17616 (JGI) SBML MML
bmv00281 Burkholderia mallei SAVP1 SBML MML
bmy00281 Brugia malayi (filaria) SBML MML
bov00281 Brucella ovis SBML MML
bpa00281 Bordetella parapertussis SBML MML
bpd00281 Burkholderia pseudomallei 668 SBML MML
bpe00281 Bordetella pertussis SBML MML
bph00281 Burkholderia phymatum SBML MML
bpl00281 Burkholderia pseudomallei 1106a SBML MML
bpm00281 Burkholderia pseudomallei 1710b SBML MML
bps00281 Burkholderia pseudomallei K96243 SBML MML
bpt00281 Bordetella petrii SBML MML
bpu00281 Bacillus pumilus SBML MML
bra00281 Bradyrhizobium sp. ORS278 SBML MML
bsu00281 Bacillus subtilis SBML MML
bte00281 Burkholderia thailandensis SBML MML
bth00281 Bacteroides thetaiotaomicron SBML MML
btk00281 Bacillus thuringiensis 97-27 SBML MML
btl00281 Bacillus thuringiensis Al Hakam SBML MML
bur00281 Burkholderia sp. 383 SBML MML
bvi00281 Burkholderia vietnamiensis SBML MML
bvu00281 Bacteroides vulgatus SBML MML
bwe00281 Bacillus weihenstephanensis SBML MML
bxe00281 Burkholderia xenovorans SBML MML
cak00281 Caulobacter sp. K31 SBML MML
cal00281 Candida albicans SBML MML
cau00281 Chloroflexus aurantiacus SBML MML
cbd00281 Coxiella burnetii Dugway 5J108-111 SBML MML
cbe00281 Clostridium beijerinckii SBML MML
cbk00281 Clostridium botulinum B Eklund 17B SBML MML
cbs00281 Coxiella burnetii RSA 331 SBML MML
cbu00281 Coxiella burnetii RSA 493 SBML MML
ccr00281 Caulobacter crescentus CB15 SBML MML
cdi00281 Corynebacterium diphtheriae SBML MML
cef00281 Corynebacterium efficiens SBML MML
cel00281 Caenorhabditis elegans (nematode) SBML MML
cfa00281 Canis familiaris (dog) SBML MML
cff00281 Campylobacter fetus SBML MML
cgb00281 Corynebacterium glutamicum ATCC 13032 (Bielefeld) SBML MML
cgl00281 Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) SBML MML
cgr00281 Candida glabrata SBML MML
cgt00281 Corynebacterium glutamicum R SBML MML
chu00281 Cytophaga hutchinsonii SBML MML
chy00281 Carboxydothermus hydrogenoformans SBML MML
cja00281 Cellvibrio japonicus SBML MML
cjk00281 Corynebacterium jeikeium SBML MML
ckl00281 Clostridium kluyveri DSM 555 SBML MML
cko00281 Citrobacter koseri ATCC BAA-895 SBML MML
cma00281 Caldivirga maquilingensis SBML MML
cme00281 Cyanidioschyzon merolae SBML MML
cmi00281 Clavibacter michiganensis subsp. michiganensis SBML MML
cms00281 Clavibacter michiganensis subsp. sepedonicus SBML MML
cnb00281 Cryptococcus neoformans B-3501A SBML MML
cne00281 Cryptococcus neoformans JEC21 SBML MML
cpe00281 Clostridium perfringens 13 SBML MML
cps00281 Colwellia psychrerythraea SBML MML
cre00281 Chlamydomonas reinhardtii SBML MML
csa00281 Chromohalobacter salexigens SBML MML
csc00281 Caldicellulosiruptor saccharolyticus SBML MML
ctc00281 Clostridium tetani E88 SBML MML
cte00281 Chlorobaculum tepidum SBML MML
cti00281 Cupriavidus taiwanensis SBML MML
cur00281 Corynebacterium urealyticum SBML MML
cvi00281 Chromobacterium violaceum SBML MML
cya00281 Cyanobacteria Yellowstone A-Prime SBML MML
cyb00281 Cyanobacteria Yellowstone B-Prime SBML MML
daag00281 (Undocumented) SBML MML
dac00281 Delftia acidovorans SBML MML
dame00281 (Undocumented) SBML MML
dar00281 Dechloromonas aromatica SBML MML
dbmo00281 Bombyx mori (silkmoth) SBML MML
dcbr00281 (Undocumented) SBML MML
dcin00281 (Undocumented) SBML MML
ddi00281 Dictyostelium discoideum SBML MML
decb00281 (Undocumented) SBML MML
deh00281 Dehalococcoides sp. CBDB1 SBML MML
det00281 Dehalococcoides ethenogenes SBML MML
dfru00281 Fugu rubripes (Japanese puffer fish) SBML MML
dge00281 Deinococcus geothermalis SBML MML
dha00281 Debaryomyces hansenii SBML MML
dkwa00281 Kluyveromyces waltii SBML MML
dme00281 Drosophila melanogaster (fruit fly) SBML MML
dol00281 Candidatus Desulfococcus oleovorans SBML MML
dola00281 Oryzias latipes (Japanese medaka) SBML MML
dpo00281 Drosophila pseudoobscura pseudoobscura SBML MML
dpop00281 (Undocumented) SBML MML
dptm00281 (Undocumented) SBML MML
dra00281 Deinococcus radiodurans SBML MML
dre00281 Danio rerio (zebrafish) SBML MML
drm00281 Desulfotomaculum reducens SBML MML
dsba00281 Saccharomyces bayanus SBML MML
dsh00281 Dinoroseobacter shibae SBML MML
dsmi00281 Saccharomyces mikatae SBML MML
dspd00281 (Undocumented) SBML MML
dsy00281 Desulfitobacterium hafniense Y51 SBML MML
dtni00281 Tetraodon nigroviridis (green spotted puffer) SBML MML
dtps00281 (Undocumented) SBML MML
dvu00281 Desulfovibrio vulgaris Hildenborough SBML MML
dvvi00281 (Undocumented) SBML MML
eacp00281 (Undocumented) SBML MML
eath00281 Arabidopsis thaliana (thale cress) (EST) SBML MML
eba00281 Aromatoleum aromaticum EbN1 SBML MML
ebna00281 Brassica napus (rape) (EST) SBML MML
ebvl00281 Beta vulgaris (beet) (EST) SBML MML
eca00281 Erwinia carotovora SBML MML
ecan00281 Capsicum annuum (chile pepper) (EST) SBML MML
ecc00281 Escherichia coli CFT073 (UPEC) SBML MML
ecd00281 Escherichia coli K-12 DH10B SBML MML
ece00281 Escherichia coli O157 EDL933 (EHEC) SBML MML
ech00281 Ehrlichia chaffeensis SBML MML
eci00281 Escherichia coli UTI89 (UPEC) SBML MML
ecj00281 Escherichia coli K-12 W3110 SBML MML
ecl00281 Escherichia coli ATCC 8739 SBML MML
ecm00281 Escherichia coli SECEC SBML MML
eco00281 Escherichia coli K-12 MG1655 SBML MML
ecp00281 Escherichia coli 536 (UPEC) SBML MML
ecs00281 Escherichia coli O157 Sakai (EHEC) SBML MML
ecsi00281 Citrus sinensis (Valencia orange) (EST) SBML MML
ecsv00281 Ciona savignyi (EST) SBML MML
ecu00281 Encephalitozoon cuniculi SBML MML
ecv00281 Escherichia coli APEC O1 SBML MML
ecw00281 Escherichia coli E24377A SBML MML
ecx00281 Escherichia coli HS SBML MML
eees00281 Euphorbia esula (leafy spurge) (EST) SBML MML
efar00281 Festuca arundinacea (tall fescue) (EST) SBML MML
egar00281 Gossypium arboreum (tree cotton) (EST) SBML MML
eghi00281 Gossypium hirsutum (upland cotton) (EST) SBML MML
egma00281 Glycine max (soybean) (EST) SBML MML
egra00281 Gossypium raimondii (EST) SBML MML
ehan00281 Helianthus annuus (sunflower) (EST) SBML MML
ehvu00281 Hordeum vulgare (barley) (EST) SBML MML
eini00281 Ipomoea nil (Japanese morning glory) (EST) SBML MML
eli00281 Erythrobacter litoralis SBML MML
elja00281 Lotus japonicus (lotus) (EST) SBML MML
elpe00281 Lactuca perennis (blue lettuce) (EST) SBML MML
elsi00281 Lactuca saligna (willow-leaf lettuce) (EST) SBML MML
elst00281 Lactuca sativa (lettuce) (EST) SBML MML
elvi00281 Lactuca virosa (wild lettuce) (EST) SBML MML
emec00281 Manihot esculenta (cassava) (EST) SBML MML
emte00281 Molgula tectiformis (EST) SBML MML
emtr00281 Medicago truncatula (barrel medic) (EST) SBML MML
enbe00281 Nicotiana benthamiana (EST) SBML MML
ent00281 Enterobacter sp. 638 SBML MML
enta00281 Nicotiana tabacum (tobacco) (EST) SBML MML
eosa00281 Oryza sativa (rice) (EST) SBML MML
eosi00281 Oryza sativa indica (Indian rice) (EST) SBML MML
eosj00281 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00281 Picea glauca (white spruce) (EST) SBML MML
epop00281 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00281 (Undocumented) SBML MML
eppi00281 Pinus pinaster (maritime pine) (EST) SBML MML
eppp00281 Physcomitrella patens subsp. patens (EST) SBML MML
epps00281 Prunus persica (peach) (EST) SBML MML
epsi00281 Picea sitchensis (sitka spruce) (EST) SBML MML
epta00281 Pinus taeda (loblolly pine) (EST) SBML MML
eptp00281 Populus tremula (European aspen) (EST) SBML MML
esa00281 Enterobacter sakazakii SBML MML
esbi00281 Sorghum bicolor (sorghum) (EST) SBML MML
esi00281 Exiguobacterium sibiricum SBML MML
esja00281 Schistosoma japonicum (fluke) (EST) SBML MML
esly00281 Solanum lycopersicum (tomato) (EST) SBML MML
esof00281 Saccharum officinarum (sugarcane) (EST) SBML MML
espp00281 (Undocumented) SBML MML
espu00281 Strongylocentrotus purpuratus (purple sea urchin) (EST) SBML MML
estu00281 Solanum tuberosum (potato) (EST) SBML MML
eta00281 Erwinia tasmaniensis SBML MML
etae00281 Triticum aestivum (wheat) (EST) SBML MML
evvi00281 Vitis vinifera (wine grape) (EST) SBML MML
ezel00281 (Undocumented) SBML MML
ezma00281 Zea mays (maize) (EST) SBML MML
fal00281 Frankia alni SBML MML
fgr00281 Fusarium graminearum SBML MML
fjo00281 Flavobacterium johnsoniae SBML MML
fma00281 Finegoldia magna SBML MML
fnu00281 Fusobacterium nucleatum SBML MML
fph00281 Francisella philomiragia SBML MML
fps00281 Flavobacterium psychrophilum SBML MML
fra00281 Frankia sp. CcI3 SBML MML
fre00281 Frankia sp. EAN1pec SBML MML
fta00281 Francisella tularensis subsp. holarctica FTNF002-00 SBML MML
ftf00281 Francisella tularensis subsp. tularensis FSC 198 SBML MML
ftl00281 Francisella tularensis subsp. holarctica LVS SBML MML
ftm00281 Francisella tularensis subsp. mediasiatica FSC147 SBML MML
ftn00281 Francisella tularensis subsp. novicida U112 SBML MML
ftu00281 Francisella tularensis subsp. tularensis SCHU S4 SBML MML
ftw00281 Francisella tularensis subsp. tularensis WY96-3418 SBML MML
gbe00281 Granulobacter bethesdensis SBML MML
gdi00281 Gluconacetobacter diazotrophicus PAl 5 (Brazil) SBML MML
gfo00281 Gramella forsetii SBML MML
gga00281 Gallus gallus (chicken) SBML MML
gka00281 Geobacillus kaustophilus SBML MML
glo00281 Geobacter lovleyi SBML MML
gme00281 Geobacter metallireducens SBML MML
gox00281 Gluconobacter oxydans SBML MML
gsu00281 Geobacter sulfurreducens SBML MML
gur00281 Geobacter uraniumreducens SBML MML
gvi00281 Gloeobacter violaceus SBML MML
hal00281 Halobacterium sp. NRC-1 SBML MML
hau00281 Herpetosiphon aurantiacus SBML MML
hbu00281 Hyperthermus butylicus SBML MML
hch00281 Hahella chejuensis SBML MML
hma00281 Haloarcula marismortui SBML MML
hmo00281 Heliobacterium modesticaldum SBML MML
hne00281 Hyphomonas neptunium SBML MML
hsa00281 Homo sapiens (human) SBML MML
hsl00281 Halobacterium salinarum R1 SBML MML
hwa00281 Haloquadratum walsbyi SBML MML
iho00281 Ignicoccus hospitalis SBML MML
ilo00281 Idiomarina loihiensis SBML MML
jan00281 Jannaschia sp. CCS1 SBML MML
kcr00281 Candidatus Korarchaeum cryptofilum SBML MML
kla00281 Kluyveromyces lactis SBML MML
kpn00281 Klebsiella pneumoniae SBML MML
kra00281 Kineococcus radiotolerans SBML MML
krh00281 Kocuria rhizophila SBML MML
lbc00281 Laccaria bicolor SBML MML
lbf00281 Leptospira biflexa serovar Patoc Patoc 1 (Ames) SBML MML
lbi00281 Leptospira biflexa serovar Patoc Patoc 1 (Paris) SBML MML
lch00281 Leptothrix cholodnii SBML MML
lic00281 Leptospira interrogans serovar Copenhageni SBML MML
lil00281 Leptospira interrogans serovar lai SBML MML
lma00281 Leishmania major SBML MML
lpc00281 Legionella pneumophila Corby SBML MML
lpf00281 Legionella pneumophila Lens SBML MML
lpn00281 Legionella pneumophila Philadelphia 1 SBML MML
lpp00281 Legionella pneumophila Paris SBML MML
lsp00281 Lysinibacillus sphaericus SBML MML
lwe00281 Listeria welshimeri SLCC5334 SBML MML
lxx00281 Leifsonia xyli xyli CTCB07 SBML MML
mab00281 Mycobacterium abscessus ATCC 19977T SBML MML
mac00281 Methanosarcina acetivorans SBML MML
mae00281 Methanococcus aeolicus SBML MML
mag00281 Magnetospirillum magneticum SBML MML
maq00281 Marinobacter aquaeolei SBML MML
mav00281 Mycobacterium avium 104 SBML MML
mba00281 Methanosarcina barkeri SBML MML
mbb00281 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbn00281 Candidatus Methanoregula boonei SBML MML
mbo00281 Mycobacterium bovis AF2122/97 SBML MML
mbr00281 Monosiga brevicollis SBML MML
mbu00281 Methanococcoides burtonii SBML MML
mcc00281 Macaca mulatta (rhesus monkey) SBML MML
mdo00281 Monodelphis domestica (opossum) SBML MML
mes00281 Mesorhizobium sp. BNC1 SBML MML
met00281 Methylobacterium sp. 4-46 SBML MML
mex00281 Methylobacterium extorquens SBML MML
mfa00281 Methylobacillus flagellatus SBML MML
mge00281 Mycoplasma genitalium SBML MML
mgi00281 Mycobacterium gilvum SBML MML
mgl00281 Malassezia globosa SBML MML
mgm00281 Magnetococcus sp. MC-1 SBML MML
mgr00281 Magnaporthe grisea SBML MML
mhu00281 Methanospirillum hungatei SBML MML
mja00281 Methanococcus jannaschii SBML MML
mjl00281 Mycobacterium sp. JLS SBML MML
mka00281 Methanopyrus kandleri SBML MML
mkm00281 Mycobacterium sp. KMS SBML MML
mle00281 Mycobacterium leprae TN SBML MML
mlo00281 Mesorhizobium loti SBML MML
mma00281 Methanosarcina mazei SBML MML
mmc00281 Mycobacterium sp. MCS SBML MML
mmi00281 Mycobacterium marinum M SBML MML
mmp00281 Methanococcus maripaludis S2 SBML MML
mmr00281 Maricaulis maris SBML MML
mms00281 Minibacterium massiliensis SBML MML
mmu00281 Mus musculus (mouse) SBML MML
mmw00281 Marinomonas sp. MWYL1 SBML MML
mmx00281 Methanococcus maripaludis C6 SBML MML
mmz00281 Methanococcus maripaludis C7 SBML MML
mpa00281 Mycobacterium avium paratuberculosis SBML MML
mpt00281 Methylibium petroleiphilum SBML MML
mra00281 Mycobacterium tuberculosis H37Ra SBML MML
mrd00281 Methylobacterium radiotolerans SBML MML
mse00281 Metallosphaera sedula SBML MML
msi00281 Methanobrevibacter smithii ATCC 35061 SBML MML
msm00281 Mycobacterium smegmatis SBML MML
mst00281 Methanosphaera stadtmanae SBML MML
mtc00281 Mycobacterium tuberculosis CDC1551 SBML MML
mtf00281 Mycobacterium tuberculosis F11 SBML MML
mth00281 Methanobacterium thermoautotrophicum SBML MML
mtu00281 Mycobacterium tuberculosis H37Rv SBML MML
mul00281 Mycobacterium ulcerans SBML MML
mva00281 Mycobacterium vanbaalenii SBML MML
mvn00281 Methanococcus vannielii SBML MML
mxa00281 Myxococcus xanthus SBML MML
nar00281 Novosphingobium aromaticivorans SBML MML
nca00281 Nocardioides sp. JS614 SBML MML
ncr00281 Neurospora crassa SBML MML
neu00281 Nitrosomonas europaea SBML MML
nfa00281 Nocardia farcinica SBML MML
ngo00281 Neisseria gonorrhoeae SBML MML
nha00281 Nitrobacter hamburgensis SBML MML
nma00281 Neisseria meningitidis Z2491 (serogroup A) SBML MML
nmc00281 Neisseria meningitidis FAM18 (serogroup C) SBML MML
nme00281 Neisseria meningitidis MC58 (serogroup B) SBML MML
nmr00281 Nitrosopumilus maritimus SBML MML
nmu00281 Nitrosospira multiformis SBML MML
noc00281 Nitrosococcus oceani SBML MML
nph00281 Natronomonas pharaonis SBML MML
npu00281 Nostoc punctiforme SBML MML
nwi00281 Nitrobacter winogradskyi SBML MML
oaa00281 Ornithorhynchus anatinus (platypus) SBML MML
oan00281 Ochrobactrum anthropi SBML MML
oih00281 Oceanobacillus iheyensis SBML MML
olu00281 Ostreococcus lucimarinus SBML MML
osa00281 Oryza sativa japonica (Japanese rice) SBML MML
ote00281 Opitutus terrae SBML MML
pab00281 Pyrococcus abyssi SBML MML
pac00281 Propionibacterium acnes SBML MML
pae00281 Pseudomonas aeruginosa PAO1 SBML MML
pai00281 Pyrobaculum aerophilum SBML MML
pan00281 Podospora anserina SBML MML
pap00281 Pseudomonas aeruginosa PA7 SBML MML
par00281 Psychrobacter arcticum SBML MML
pas00281 Pyrobaculum arsenaticum SBML MML
pat00281 Pseudoalteromonas atlantica SBML MML
pau00281 Pseudomonas aeruginosa UCBPP-PA14 SBML MML
pcl00281 Pyrobaculum calidifontis SBML MML
pcr00281 Psychrobacter cryohalolentis SBML MML
pde00281 Paracoccus denitrificans SBML MML
pdi00281 Parabacteroides distasonis SBML MML
pen00281 Pseudomonas entomophila SBML MML
pfa00281 Plasmodium falciparum 3D7 SBML MML
pfl00281 Pseudomonas fluorescens Pf-5 SBML MML
pfo00281 Pseudomonas fluorescens Pf0-1 SBML MML
pfu00281 Pyrococcus furiosus SBML MML
pgi00281 Porphyromonas gingivalis W83 SBML MML
pgn00281 Porphyromonas gingivalis ATCC 33277 SBML MML
pha00281 Pseudoalteromonas haloplanktis SBML MML
pic00281 Pichia stipitis SBML MML
pin00281 Psychromonas ingrahamii SBML MML
pis00281 Pyrobaculum islandicum SBML MML
pla00281 Parvibaculum lavamentivorans SBML MML
plu00281 Photorhabdus luminescens SBML MML
pmy00281 Pseudomonas mendocina SBML MML
pna00281 Polaromonas naphthalenivorans SBML MML
pne00281 Polynucleobacter necessarius SBML MML
pnu00281 Polynucleobacter sp. QLW-P1DMWA-1 SBML MML
pol00281 Polaromonas sp. JS666 SBML MML
ppf00281 Pseudomonas putida F1 SBML MML
ppg00281 Pseudomonas putida GB-1 SBML MML
ppp00281 Physcomitrella patens subsp. patens SBML MML
ppr00281 Photobacterium profundum SBML MML
ppu00281 Pseudomonas putida KT2440 SBML MML
ppw00281 Pseudomonas putida W619 SBML MML
prw00281 Psychrobacter sp. PRwf-1 SBML MML
psa00281 Pseudomonas stutzeri SBML MML
psb00281 Pseudomonas syringae pv. syringae B728a SBML MML
psp00281 Pseudomonas syringae pv. phaseolicola 1448A SBML MML
pst00281 Pseudomonas syringae pv. tomato DC3000 SBML MML
pto00281 Picrophilus torridus SBML MML
ptr00281 Pan troglodytes (chimpanzee) SBML MML
pub00281 Candidatus Pelagibacter ubique SBML MML
rba00281 Rhodopirellula baltica SBML MML
rca00281 Roseiflexus castenholzii DSM13941 SBML MML
rci00281 Uncultured methanogenic archaeon RC-I SBML MML
rco00281 Rickettsia conorii SBML MML
rde00281 Roseobacter denitrificans SBML MML
rec00281 Rhizobium etli CIAT 652 SBML MML
reh00281 Ralstonia eutropha H16 SBML MML
ret00281 Rhizobium etli CFN 42 SBML MML
reu00281 Ralstonia eutropha JMP134 SBML MML
rfe00281 Rickettsia felis SBML MML
rfr00281 Rhodoferax ferrireducens SBML MML
rha00281 Rhodococcus sp. RHA1 SBML MML
rle00281 Rhizobium leguminosarum SBML MML
rme00281 Ralstonia metallidurans SBML MML
rpa00281 Rhodopseudomonas palustris CGA009 SBML MML
rpb00281 Rhodopseudomonas palustris HaA2 SBML MML
rpc00281 Rhodopseudomonas palustris BisB18 SBML MML
rpd00281 Rhodopseudomonas palustris BisB5 SBML MML
rpe00281 Rhodopseudomonas palustris BisA53 SBML MML
rpr00281 Rickettsia prowazekii SBML MML
rpt00281 Rhodopseudomonas palustris TIE-1 SBML MML
rrs00281 Roseiflexus sp. RS-1 SBML MML
rru00281 Rhodospirillum rubrum SBML MML
rsa00281 Renibacterium salmoninarum SBML MML
rso00281 Ralstonia solanacearum SBML MML
rsp00281 Rhodobacter sphaeroides 2.4.1 SBML MML
rsq00281 Rhodobacter sphaeroides ATCC 17025 SBML MML
rty00281 Rickettsia typhi SBML MML
rxy00281 Rubrobacter xylanophilus SBML MML
saa00281 Staphylococcus aureus USA300 SBML MML
sab00281 Staphylococcus aureus RF122 SBML MML
sac00281 Staphylococcus aureus COL SBML MML
sae00281 Staphylococcus aureus Newman SBML MML
sah00281 Staphylococcus aureus JH1 SBML MML
sai00281 Sulfolobus acidocaldarius SBML MML
saj00281 Staphylococcus aureus JH9 SBML MML
sal00281 Sphingopyxis alaskensis SBML MML
sam00281 Staphylococcus aureus MW2 SBML MML
sao00281 Staphylococcus aureus NCTC8325 SBML MML
saq00281 Salinispora arenicola SBML MML
sar00281 Staphylococcus aureus MRSA252 SBML MML
sas00281 Staphylococcus aureus MSSA476 SBML MML
sat00281 Syntrophus aciditrophicus SBML MML
sau00281 Staphylococcus aureus N315 SBML MML
sav00281 Staphylococcus aureus Mu50 SBML MML
saw00281 Staphylococcus aureus Mu3 SBML MML
sax00281 Staphylococcus aureus USA300 TCH1516 SBML MML
saz00281 Shewanella amazonensis SBML MML
sbc00281 Shigella boydii CDC 3083-94 SBML MML
sbl00281 Shewanella baltica OS155 SBML MML
sbm00281 Shewanella baltica OS185 SBML MML
sbn00281 Shewanella baltica OS195 SBML MML
sbo00281 Shigella boydii Sb227 SBML MML
sce00281 Saccharomyces cerevisiae SBML MML
scl00281 Sorangium cellulosum SBML MML
sco00281 Streptomyces coelicolor SBML MML
sde00281 Saccharophagus degradans SBML MML
sdn00281 Shewanella denitrificans SBML MML
sdy00281 Shigella dysenteriae SBML MML
sec00281 Salmonella enterica subsp. enterica serovar Choleraesuis SBML MML
sen00281 Saccharopolyspora erythraea SBML MML
ses00281 Salmonella enterica subsp. arizonae SBML MML
sfl00281 Shigella flexneri 301 (serotype 2a) SBML MML
sfr00281 Shewanella frigidimarina SBML MML
sfu00281 Syntrophobacter fumaroxidans SBML MML
sfv00281 Shigella flexneri 8401 (serotype 5b) SBML MML
sfx00281 Shigella flexneri 2457T (serotype 2a) SBML MML
sgr00281 Streptomyces griseus SBML MML
she00281 Shewanella sp. MR-4 SBML MML
shl00281 Shewanella halifaxensis SBML MML
shm00281 Shewanella sp. MR-7 SBML MML
shn00281 Shewanella sp. ANA-3 SBML MML
shw00281 Shewanella sp. W3-18-1 SBML MML
sil00281 Ruegeria pomeroyi SBML MML
sit00281 Silicibacter sp. TM1040 SBML MML
slo00281 Shewanella loihica SBML MML
sma00281 Streptomyces avermitilis SBML MML
smd00281 Sinorhizobium medicae SBML MML
sme00281 Sinorhizobium meliloti SBML MML
sml00281 Stenotrophomonas maltophilia SBML MML
smr00281 Staphylothermus marinus SBML MML
son00281 Shewanella oneidensis SBML MML
spc00281 Shewanella putrefaciens SBML MML
spe00281 Serratia proteamaculans SBML MML
spl00281 Shewanella pealeana SBML MML
spq00281 Salmonella enterica subsp. enterica serovar Paratyphi B SBML MML
spt00281 Salmonella enterica subsp. enterica serovar Paratyphi A SBML MML
spv00281 Streptococcus pneumoniae Hungary19A 6 SBML MML
spz00281 Streptococcus pyogenes MGAS5005 (serotype M1) SBML MML
sru00281 Salinibacter ruber SBML MML
sse00281 Shewanella sediminis SBML MML
ssn00281 Shigella sonnei SBML MML
sso00281 Sulfolobus solfataricus SBML MML
ssp00281 Staphylococcus saprophyticus SBML MML
sth00281 Symbiobacterium thermophilum SBML MML
stm00281 Salmonella typhimurium LT2 SBML MML
sto00281 Sulfolobus tokodaii SBML MML
stp00281 Salinispora tropica SBML MML
stt00281 Salmonella enterica subsp. enterica serovar Typhi Ty2 SBML MML
sty00281 Salmonella enterica subsp. enterica serovar Typhi CT18 SBML MML
sus00281 Solibacter usitatus SBML MML
swd00281 Shewanella woodyi ATCC 51908 SBML MML
swi00281 Sphingomonas wittichii SBML MML
syg00281 Synechococcus sp. CC9311 SBML MML
tac00281 Thermoplasma acidophilum SBML MML
tbr00281 Trypanosoma brucei SBML MML
tca00281 Tribolium castaneum (red flour beetle) SBML MML
tcr00281 Trypanosoma cruzi SBML MML
tcx00281 Thiomicrospira crunogena SBML MML
tet00281 Tetrahymena thermophila SBML MML
tfu00281 Thermobifida fusca SBML MML
tko00281 Thermococcus kodakaraensis SBML MML
tne00281 Thermoproteus neutrophilus SBML MML
tth00281 Thermus thermophilus HB27 SBML MML
ttj00281 Thermus thermophilus HB8 SBML MML
tvo00281 Thermoplasma volcanium SBML MML
uma00281 Ustilago maydis SBML MML
vch00281 Vibrio cholerae O1 SBML MML
vco00281 Vibrio cholerae O395 SBML MML
vei00281 Verminephrobacter eiseniae SBML MML
vfi00281 Vibrio fischeri SBML MML
vha00281 Vibrio harveyi SBML MML
vpa00281 Vibrio parahaemolyticus SBML MML
vpo00281 Vanderwaltozyma polyspora SBML MML
vvu00281 Vibrio vulnificus CMCP6 SBML MML
vvy00281 Vibrio vulnificus YJ016 SBML MML
xac00281 Xanthomonas axonopodis SBML MML
xau00281 Xanthobacter autotrophicus SBML MML
xcb00281 Xanthomonas campestris pv. campestris 8004 SBML MML
xcc00281 Xanthomonas campestris pv. campestris ATCC 33913 SBML MML
xcv00281 Xanthomonas campestris pv. vesicatoria SBML MML
xla00281 Xenopus laevis (African clawed frog) SBML MML
xom00281 Xanthomonas oryzae MAFF311018 SBML MML
xoo00281 Xanthomonas oryzae KACC10331 SBML MML
xtr00281 Xenopus tropicalis (western clawed frog) SBML MML
yen00281 Yersinia enterocolitica SBML MML
yli00281 Yarrowia lipolytica SBML MML
ypa00281 Yersinia pestis Antiqua SBML MML
ype00281 Yersinia pestis CO92 SBML MML
ypg00281 Yersinia pestis Angola SBML MML
ypi00281 Yersinia pseudotuberculosis IP31758 SBML MML
ypk00281 Yersinia pestis KIM SBML MML
ypm00281 Yersinia pestis Mediaevails SBML MML
ypn00281 Yersinia pestis Nepal516 SBML MML
ypp00281 Yersinia pestis Pestoides SBML MML
yps00281 Yersinia pseudotuberculosis IP32953 SBML MML
ypy00281 Yersinia pseudotuberculosis YPIII SBML MML
zmo00281 Zymomonas mobilis SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.