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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00140: (Undocumented)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
afm00140 Aspergillus fumigatus SBML MML
aga00140 Anopheles gambiae (mosquito) SBML MML
ang00140 Aspergillus niger SBML MML
ath00140 Arabidopsis thaliana (thale cress) SBML MML
ava00140 Anabaena variabilis SBML MML
bac00140 Burkholderia ambifaria MC40-6 SBML MML
bta00140 Bos taurus (cow) SBML MML
bur00140 Burkholderia sp. 383 SBML MML
cch00140 Chlorobium chlorochromatii SBML MML
cfa00140 Canis familiaris (dog) SBML MML
cgt00140 Corynebacterium glutamicum R SBML MML
dbmo00140 Bombyx mori (silkmoth) SBML MML
dcin00140 (Undocumented) SBML MML
decb00140 (Undocumented) SBML MML
dfru00140 Fugu rubripes (Japanese puffer fish) SBML MML
dme00140 Drosophila melanogaster (fruit fly) SBML MML
dola00140 Oryzias latipes (Japanese medaka) SBML MML
dpo00140 Drosophila pseudoobscura pseudoobscura SBML MML
dpop00140 (Undocumented) SBML MML
dptm00140 (Undocumented) SBML MML
dre00140 Danio rerio (zebrafish) SBML MML
dtni00140 Tetraodon nigroviridis (green spotted puffer) SBML MML
dtps00140 (Undocumented) SBML MML
dvvi00140 (Undocumented) SBML MML
eath00140 Arabidopsis thaliana (thale cress) (EST) SBML MML
ebna00140 Brassica napus (rape) (EST) SBML MML
ebvl00140 Beta vulgaris (beet) (EST) SBML MML
ecan00140 Capsicum annuum (chile pepper) (EST) SBML MML
ecl00140 Escherichia coli ATCC 8739 SBML MML
ecsi00140 Citrus sinensis (Valencia orange) (EST) SBML MML
ecsv00140 Ciona savignyi (EST) SBML MML
efar00140 Festuca arundinacea (tall fescue) (EST) SBML MML
eghi00140 Gossypium hirsutum (upland cotton) (EST) SBML MML
egma00140 Glycine max (soybean) (EST) SBML MML
egra00140 Gossypium raimondii (EST) SBML MML
ehan00140 Helianthus annuus (sunflower) (EST) SBML MML
ehvu00140 Hordeum vulgare (barley) (EST) SBML MML
eini00140 Ipomoea nil (Japanese morning glory) (EST) SBML MML
elja00140 Lotus japonicus (lotus) (EST) SBML MML
elpe00140 Lactuca perennis (blue lettuce) (EST) SBML MML
elsi00140 Lactuca saligna (willow-leaf lettuce) (EST) SBML MML
elst00140 Lactuca sativa (lettuce) (EST) SBML MML
elvi00140 Lactuca virosa (wild lettuce) (EST) SBML MML
emec00140 Manihot esculenta (cassava) (EST) SBML MML
emte00140 Molgula tectiformis (EST) SBML MML
emtr00140 Medicago truncatula (barrel medic) (EST) SBML MML
enbe00140 Nicotiana benthamiana (EST) SBML MML
enta00140 Nicotiana tabacum (tobacco) (EST) SBML MML
eosa00140 Oryza sativa (rice) (EST) SBML MML
eosi00140 Oryza sativa indica (Indian rice) (EST) SBML MML
eosj00140 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00140 Picea glauca (white spruce) (EST) SBML MML
epop00140 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00140 (Undocumented) SBML MML
eppi00140 Pinus pinaster (maritime pine) (EST) SBML MML
eppp00140 Physcomitrella patens subsp. patens (EST) SBML MML
epps00140 Prunus persica (peach) (EST) SBML MML
epsi00140 Picea sitchensis (sitka spruce) (EST) SBML MML
epta00140 Pinus taeda (loblolly pine) (EST) SBML MML
esbi00140 Sorghum bicolor (sorghum) (EST) SBML MML
esly00140 Solanum lycopersicum (tomato) (EST) SBML MML
esof00140 Saccharum officinarum (sugarcane) (EST) SBML MML
espp00140 (Undocumented) SBML MML
espu00140 Strongylocentrotus purpuratus (purple sea urchin) (EST) SBML MML
estu00140 Solanum tuberosum (potato) (EST) SBML MML
etae00140 Triticum aestivum (wheat) (EST) SBML MML
evvi00140 Vitis vinifera (wine grape) (EST) SBML MML
ezel00140 (Undocumented) SBML MML
ezma00140 Zea mays (maize) (EST) SBML MML
fgr00140 Fusarium graminearum SBML MML
fre00140 Frankia sp. EAN1pec SBML MML
gga00140 Gallus gallus (chicken) SBML MML
gme00140 Geobacter metallireducens SBML MML
hsa00140 Homo sapiens (human) SBML MML
lbc00140 Laccaria bicolor SBML MML
lbr00140 Lactobacillus brevis SBML MML
lsp00140 Lysinibacillus sphaericus SBML MML
mab00140 Mycobacterium abscessus ATCC 19977T SBML MML
mav00140 Mycobacterium avium 104 SBML MML
mbb00140 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbo00140 Mycobacterium bovis AF2122/97 SBML MML
mbr00140 Monosiga brevicollis SBML MML
mcc00140 Macaca mulatta (rhesus monkey) SBML MML
mdo00140 Monodelphis domestica (opossum) SBML MML
mgi00140 Mycobacterium gilvum SBML MML
mjl00140 Mycobacterium sp. JLS SBML MML
mkm00140 Mycobacterium sp. KMS SBML MML
mlo00140 Mesorhizobium loti SBML MML
mmc00140 Mycobacterium sp. MCS SBML MML
mmi00140 Mycobacterium marinum M SBML MML
mmu00140 Mus musculus (mouse) SBML MML
mmw00140 Marinomonas sp. MWYL1 SBML MML
mpa00140 Mycobacterium avium paratuberculosis SBML MML
mra00140 Mycobacterium tuberculosis H37Ra SBML MML
msm00140 Mycobacterium smegmatis SBML MML
mtf00140 Mycobacterium tuberculosis F11 SBML MML
mul00140 Mycobacterium ulcerans SBML MML
mva00140 Mycobacterium vanbaalenii SBML MML
nca00140 Nocardioides sp. JS614 SBML MML
nfa00140 Nocardia farcinica SBML MML
npu00140 Nostoc punctiforme SBML MML
oaa00140 Ornithorhynchus anatinus (platypus) SBML MML
oih00140 Oceanobacillus iheyensis SBML MML
pan00140 Podospora anserina SBML MML
pap00140 Pseudomonas aeruginosa PA7 SBML MML
pha00140 Pseudoalteromonas haloplanktis SBML MML
pol00140 Polaromonas sp. JS666 SBML MML
ppp00140 Physcomitrella patens subsp. patens SBML MML
prw00140 Psychrobacter sp. PRwf-1 SBML MML
psb00140 Pseudomonas syringae pv. syringae B728a SBML MML
psp00140 Pseudomonas syringae pv. phaseolicola 1448A SBML MML
ptr00140 Pan troglodytes (chimpanzee) SBML MML
rba00140 Rhodopirellula baltica SBML MML
rec00140 Rhizobium etli CIAT 652 SBML MML
reh00140 Ralstonia eutropha H16 SBML MML
rha00140 Rhodococcus sp. RHA1 SBML MML
rle00140 Rhizobium leguminosarum SBML MML
rno00140 Rattus norvegicus (rat) SBML MML
rru00140 Rhodospirillum rubrum SBML MML
rso00140 Ralstonia solanacearum SBML MML
sal00140 Sphingopyxis alaskensis SBML MML
saq00140 Salinispora arenicola SBML MML
sen00140 Saccharopolyspora erythraea SBML MML
sgr00140 Streptomyces griseus SBML MML
spu00140 Strongylocentrotus purpuratus (purple sea urchin) SBML MML
ssc00140 Sus scrofa (pig) SBML MML
stp00140 Salinispora tropica SBML MML
swi00140 Sphingomonas wittichii SBML MML
tth00140 Thermus thermophilus HB27 SBML MML
xac00140 Xanthomonas axonopodis SBML MML
xcb00140 Xanthomonas campestris pv. campestris 8004 SBML MML
xcc00140 Xanthomonas campestris pv. campestris ATCC 33913 SBML MML
xcv00140 Xanthomonas campestris pv. vesicatoria SBML MML
xfa00140 Xylella fastidiosa 9a5c SBML MML
xfm00140 Xylella fastidiosa M12 SBML MML
xfn00140 Xylella fastidiosa M23 SBML MML
xft00140 Xylella fastidiosa Temecula1 SBML MML
xla00140 Xenopus laevis (African clawed frog) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.