This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Pathway 00130: Ubiquinone and other terpenoid-quinone biosynthesis

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkOrganismSBMLMMLDownload Applet
aae00130 Aquifex aeolicus SBML MML
aau00130 Arthrobacter aurescens SBML MML
aav00130 Acidovorax avenae SBML MML
aba00130 Acidobacteria bacterium SBML MML
abc00130 Acinetobacter baumannii ACICU SBML MML
abm00130 Acinetobacter baumannii SDF SBML MML
abo00130 Alcanivorax borkumensis SBML MML
abu00130 Arcobacter butzleri SBML MML
aby00130 Acinetobacter baumannii AYE SBML MML
acb00130 Acinetobacter baumannii ATCC 17978 SBML MML
ace00130 Acidothermus cellulolyticus SBML MML
aci00130 Acinetobacter sp. ADP1 SBML MML
acr00130 Acidiphilium cryptum JF-5 SBML MML
ade00130 Anaeromyxobacter dehalogenans 2CP-C SBML MML
aeh00130 Alkalilimnicola ehrlichei SBML MML
afm00130 Aspergillus fumigatus SBML MML
afu00130 Archaeoglobus fulgidus SBML MML
afw00130 Anaeromyxobacter sp. Fw109-5 SBML MML
aga00130 Anopheles gambiae (mosquito) SBML MML
ago00130 Ashbya gossypii (Eremothecium gossypii) SBML MML
aha00130 Aeromonas hydrophila SBML MML
ajs00130 Acidovorax sp. JS42 SBML MML
ama00130 Anaplasma marginale St. Maries SBML MML
amr00130 Acaryochloris marina SBML MML
amt00130 Alkaliphilus metalliredigens SBML MML
ana00130 Anabaena sp. PCC7120 SBML MML
ang00130 Aspergillus niger SBML MML
ani00130 Aspergillus nidulans SBML MML
aoe00130 Alkaliphilus oremlandii SBML MML
aor00130 Aspergillus oryzae SBML MML
apa00130 Actinobacillus pleuropneumoniae AP76 (serotype 7) SBML MML
ape00130 Aeropyrum pernix SBML MML
aph00130 Anaplasma phagocytophilum SBML MML
apj00130 Actinobacillus pleuropneumoniae JL03 (serotype 3) SBML MML
apl00130 Actinobacillus pleuropneumoniae L20 (serotype 5b) SBML MML
art00130 Arthrobacter sp. FB24 SBML MML
asa00130 Aeromonas salmonicida SBML MML
asu00130 Actinobacillus succinogenes SBML MML
atc00130 Agrobacterium tumefaciens C58 (Cereon) SBML MML
ath00130 Arabidopsis thaliana (thale cress) SBML MML
atu00130 Agrobacterium tumefaciens C58 SBML MML
ava00130 Anabaena variabilis SBML MML
azc00130 Azorhizobium caulinodans SBML MML
azo00130 Azoarcus sp. BH72 SBML MML
baa00130 Bacillus anthracis A2012 SBML MML
bac00130 Burkholderia ambifaria MC40-6 SBML MML
bad00130 Bifidobacterium adolescentis SBML MML
bam00130 Burkholderia cepacia SBML MML
ban00130 Bacillus anthracis Ames SBML MML
bar00130 Bacillus anthracis Ames 0581 SBML MML
bat00130 Bacillus anthracis Sterne SBML MML
bav00130 Bordetella avium SBML MML
bay00130 Bacillus amyloliquefaciens SBML MML
bba00130 Bdellovibrio bacteriovorus SBML MML
bbk00130 Bartonella bacilliformis SBML MML
bbr00130 Bordetella bronchiseptica SBML MML
bbt00130 Bradyrhizobium sp. BTAi1 SBML MML
bca00130 Bacillus cereus ATCC 10987 SBML MML
bce00130 Bacillus cereus ATCC 14579 SBML MML
bch00130 Burkholderia cenocepacia HI2424 SBML MML
bcl00130 Bacillus clausii SBML MML
bcm00130 Burkholderia cenocepacia MC0-3 SBML MML
bcn00130 Burkholderia cenocepacia AU1054 SBML MML
bcs00130 Brucella canis SBML MML
bcy00130 Bacillus cytotoxis NVH 391-98 SBML MML
bcz00130 Bacillus cereus ZK SBML MML
bfl00130 Candidatus Blochmannia floridanus SBML MML
bfr00130 Bacteroides fragilis YCH46 SBML MML
bfs00130 Bacteroides fragilis NCTC9343 SBML MML
bha00130 Bacillus halodurans SBML MML
bhe00130 Bartonella henselae SBML MML
bid00130 Beijerinckia indica SBML MML
bja00130 Bradyrhizobium japonicum SBML MML
bld00130 Bacillus licheniformis DSM13 SBML MML
bli00130 Bacillus licheniformis ATCC 14580 SBML MML
blo00130 Bifidobacterium longum NCC2705 SBML MML
bma00130 Burkholderia mallei ATCC 23344 SBML MML
bmb00130 Brucella abortus 9-941 SBML MML
bmc00130 Brucella abortus S19 SBML MML
bme00130 Brucella melitensis 16M SBML MML
bmf00130 Brucella melitensis biovar Abortus SBML MML
bml00130 Burkholderia mallei NCTC 10229 SBML MML
bmn00130 Burkholderia mallei NCTC 10247 SBML MML
bms00130 Brucella suis 1330 SBML MML
bmt00130 Brucella suis ATCC 23445 SBML MML
bmu00130 Burkholderia multivorans ATCC 17616 (JGI) SBML MML
bmv00130 Burkholderia mallei SAVP1 SBML MML
bmy00130 Brugia malayi (filaria) SBML MML
bov00130 Brucella ovis SBML MML
bpa00130 Bordetella parapertussis SBML MML
bpd00130 Burkholderia pseudomallei 668 SBML MML
bpe00130 Bordetella pertussis SBML MML
bph00130 Burkholderia phymatum SBML MML
bpl00130 Burkholderia pseudomallei 1106a SBML MML
bpm00130 Burkholderia pseudomallei 1710b SBML MML
bpn00130 Candidatus Blochmannia pennsylvanicus SBML MML
bps00130 Burkholderia pseudomallei K96243 SBML MML
bpt00130 Bordetella petrii SBML MML
bpu00130 Bacillus pumilus SBML MML
bqu00130 Bartonella quintana SBML MML
bra00130 Bradyrhizobium sp. ORS278 SBML MML
bsu00130 Bacillus subtilis SBML MML
bta00130 Bos taurus (cow) SBML MML
bte00130 Burkholderia thailandensis SBML MML
bth00130 Bacteroides thetaiotaomicron SBML MML
btk00130 Bacillus thuringiensis 97-27 SBML MML
btl00130 Bacillus thuringiensis Al Hakam SBML MML
btr00130 Bartonella tribocorum SBML MML
bur00130 Burkholderia sp. 383 SBML MML
bvi00130 Burkholderia vietnamiensis SBML MML
bvu00130 Bacteroides vulgatus SBML MML
bwe00130 Bacillus weihenstephanensis SBML MML
bxe00130 Burkholderia xenovorans SBML MML
cab00130 Chlamydophila abortus SBML MML
cak00130 Caulobacter sp. K31 SBML MML
cal00130 Candida albicans SBML MML
cau00130 Chloroflexus aurantiacus SBML MML
cbb00130 Clostridium botulinum B1 Okra SBML MML
cbd00130 Coxiella burnetii Dugway 5J108-111 SBML MML
cbe00130 Clostridium beijerinckii SBML MML
cbs00130 Coxiella burnetii RSA 331 SBML MML
cbu00130 Coxiella burnetii RSA 493 SBML MML
cca00130 Chlamydophila caviae SBML MML
cch00130 Chlorobium chlorochromatii SBML MML
cco00130 Campylobacter concisus 13826 SBML MML
ccr00130 Caulobacter crescentus CB15 SBML MML
ccv00130 Campylobacter curvus SBML MML
cdi00130 Corynebacterium diphtheriae SBML MML
cef00130 Corynebacterium efficiens SBML MML
cel00130 Caenorhabditis elegans (nematode) SBML MML
cfa00130 Canis familiaris (dog) SBML MML
cfe00130 Chlamydophila felis SBML MML
cff00130 Campylobacter fetus SBML MML
cgb00130 Corynebacterium glutamicum ATCC 13032 (Bielefeld) SBML MML
cgl00130 Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) SBML MML
cgr00130 Candida glabrata SBML MML
cgt00130 Corynebacterium glutamicum R SBML MML
cha00130 Campylobacter hominis ATCC BAA-381 SBML MML
cho00130 Cryptosporidium hominis SBML MML
chu00130 Cytophaga hutchinsonii SBML MML
chy00130 Carboxydothermus hydrogenoformans SBML MML
cja00130 Cellvibrio japonicus SBML MML
cjd00130 Campylobacter jejuni subsp. doylei 269.97 SBML MML
cje00130 Campylobacter jejuni NCTC11168 SBML MML
cjj00130 Campylobacter jejuni 81-176 SBML MML
cjk00130 Corynebacterium jeikeium SBML MML
cjr00130 Campylobacter jejuni RM1221 SBML MML
cju00130 Campylobacter jejuni 81116 SBML MML
ckl00130 Clostridium kluyveri DSM 555 SBML MML
cko00130 Citrobacter koseri ATCC BAA-895 SBML MML
cma00130 Caldivirga maquilingensis SBML MML
cme00130 Cyanidioschyzon merolae SBML MML
cmi00130 Clavibacter michiganensis subsp. michiganensis SBML MML
cms00130 Clavibacter michiganensis subsp. sepedonicus SBML MML
cmu00130 Chlamydia muridarum SBML MML
cnb00130 Cryptococcus neoformans B-3501A SBML MML
cne00130 Cryptococcus neoformans JEC21 SBML MML
cpa00130 Chlamydophila pneumoniae AR39 SBML MML
cpb00130 Chlorobium phaeobacteroides BS1 SBML MML
cph00130 Chlorobium phaeobacteroides DSM 266 SBML MML
cpj00130 Chlamydophila pneumoniae J138 SBML MML
cpn00130 Chlamydophila pneumoniae CWL029 SBML MML
cps00130 Colwellia psychrerythraea SBML MML
cpt00130 Chlamydophila pneumoniae TW183 SBML MML
cre00130 Chlamydomonas reinhardtii SBML MML
csa00130 Chromohalobacter salexigens SBML MML
csc00130 Caldicellulosiruptor saccharolyticus SBML MML
cta00130 Chlamydia trachomatis A/HAR-13 (serovar A) SBML MML
ctb00130 Chlamydia trachomatis 434/Bu SBML MML
cte00130 Chlorobaculum tepidum SBML MML
cth00130 Clostridium thermocellum SBML MML
cti00130 Cupriavidus taiwanensis SBML MML
ctl00130 Chlamydia trachomatis L2b/UCH-1/proctitis SBML MML
ctr00130 Chlamydia trachomatis D/UW-3/CX (serovar D) SBML MML
cur00130 Corynebacterium urealyticum SBML MML
cvi00130 Chromobacterium violaceum SBML MML
cya00130 Cyanobacteria Yellowstone A-Prime SBML MML
cyb00130 Cyanobacteria Yellowstone B-Prime SBML MML
cyt00130 Cyanothece sp. ATCC 51142 SBML MML
daag00130 (Undocumented) SBML MML
dac00130 Delftia acidovorans SBML MML
dame00130 (Undocumented) SBML MML
dar00130 Dechloromonas aromatica SBML MML
dau00130 Candidatus Desulforudis audaxviator SBML MML
dbmo00130 Bombyx mori (silkmoth) SBML MML
dcbr00130 (Undocumented) SBML MML
dcin00130 (Undocumented) SBML MML
dde00130 Desulfovibrio desulfuricans G20 SBML MML
ddi00130 Dictyostelium discoideum SBML MML
deb00130 Dehalococcoides sp. BAV1 SBML MML
decb00130 (Undocumented) SBML MML
deh00130 Dehalococcoides sp. CBDB1 SBML MML
det00130 Dehalococcoides ethenogenes SBML MML
dfru00130 Fugu rubripes (Japanese puffer fish) SBML MML
dge00130 Deinococcus geothermalis SBML MML
dha00130 Debaryomyces hansenii SBML MML
dkwa00130 Kluyveromyces waltii SBML MML
dme00130 Drosophila melanogaster (fruit fly) SBML MML
dno00130 Dichelobacter nodosus SBML MML
dol00130 Candidatus Desulfococcus oleovorans SBML MML
dola00130 Oryzias latipes (Japanese medaka) SBML MML
dota00130 Ostreococcus tauri SBML MML
dpkn00130 (Undocumented) SBML MML
dpo00130 Drosophila pseudoobscura pseudoobscura SBML MML
dpop00130 (Undocumented) SBML MML
dps00130 Desulfotalea psychrophila SBML MML
dptm00130 (Undocumented) SBML MML
dra00130 Deinococcus radiodurans SBML MML
drm00130 Desulfotomaculum reducens SBML MML
dsba00130 Saccharomyces bayanus SBML MML
dsh00130 Dinoroseobacter shibae SBML MML
dsmi00130 Saccharomyces mikatae SBML MML
dspd00130 (Undocumented) SBML MML
dsy00130 Desulfitobacterium hafniense Y51 SBML MML
dtni00130 Tetraodon nigroviridis (green spotted puffer) SBML MML
dtps00130 (Undocumented) SBML MML
dvl00130 Desulfovibrio vulgaris DP4 SBML MML
dvu00130 Desulfovibrio vulgaris Hildenborough SBML MML
dvvi00130 (Undocumented) SBML MML
eacp00130 (Undocumented) SBML MML
eath00130 Arabidopsis thaliana (thale cress) (EST) SBML MML
eba00130 Aromatoleum aromaticum EbN1 SBML MML
ebna00130 Brassica napus (rape) (EST) SBML MML
ebvl00130 Beta vulgaris (beet) (EST) SBML MML
eca00130 Erwinia carotovora SBML MML
ecan00130 Capsicum annuum (chile pepper) (EST) SBML MML
ecc00130 Escherichia coli CFT073 (UPEC) SBML MML
ecd00130 Escherichia coli K-12 DH10B SBML MML
ece00130 Escherichia coli O157 EDL933 (EHEC) SBML MML
ech00130 Ehrlichia chaffeensis SBML MML
eci00130 Escherichia coli UTI89 (UPEC) SBML MML
ecj00130 Escherichia coli K-12 W3110 SBML MML
ecl00130 Escherichia coli ATCC 8739 SBML MML
ecm00130 Escherichia coli SECEC SBML MML
ecn00130 Ehrlichia canis SBML MML
eco00130 Escherichia coli K-12 MG1655 SBML MML
ecp00130 Escherichia coli 536 (UPEC) SBML MML
ecs00130 Escherichia coli O157 Sakai (EHEC) SBML MML
ecsi00130 Citrus sinensis (Valencia orange) (EST) SBML MML
ecsv00130 Ciona savignyi (EST) SBML MML
ecv00130 Escherichia coli APEC O1 SBML MML
ecw00130 Escherichia coli E24377A SBML MML
ecx00130 Escherichia coli HS SBML MML
eees00130 Euphorbia esula (leafy spurge) (EST) SBML MML
efa00130 Enterococcus faecalis SBML MML
efar00130 Festuca arundinacea (tall fescue) (EST) SBML MML
egar00130 Gossypium arboreum (tree cotton) (EST) SBML MML
eghi00130 Gossypium hirsutum (upland cotton) (EST) SBML MML
egma00130 Glycine max (soybean) (EST) SBML MML
egra00130 Gossypium raimondii (EST) SBML MML
ehan00130 Helianthus annuus (sunflower) (EST) SBML MML
ehvu00130 Hordeum vulgare (barley) (EST) SBML MML
eini00130 Ipomoea nil (Japanese morning glory) (EST) SBML MML
eli00130 Erythrobacter litoralis SBML MML
elja00130 Lotus japonicus (lotus) (EST) SBML MML
elpe00130 Lactuca perennis (blue lettuce) (EST) SBML MML
elst00130 Lactuca sativa (lettuce) (EST) SBML MML
elvi00130 Lactuca virosa (wild lettuce) (EST) SBML MML
emec00130 Manihot esculenta (cassava) (EST) SBML MML
emte00130 Molgula tectiformis (EST) SBML MML
emtr00130 Medicago truncatula (barrel medic) (EST) SBML MML
enbe00130 Nicotiana benthamiana (EST) SBML MML
ent00130 Enterobacter sp. 638 SBML MML
enta00130 Nicotiana tabacum (tobacco) (EST) SBML MML
eosa00130 Oryza sativa (rice) (EST) SBML MML
eosi00130 Oryza sativa indica (Indian rice) (EST) SBML MML
eosj00130 Oryza sativa japonica (Japanese rice) (EST) SBML MML
epgl00130 Picea glauca (white spruce) (EST) SBML MML
epop00130 Populus trichocarpa (black cottonwood) (EST) SBML MML
eppa00130 (Undocumented) SBML MML
eppi00130 Pinus pinaster (maritime pine) (EST) SBML MML
eppp00130 Physcomitrella patens subsp. patens (EST) SBML MML
epps00130 Prunus persica (peach) (EST) SBML MML
epsi00130 Picea sitchensis (sitka spruce) (EST) SBML MML
epta00130 Pinus taeda (loblolly pine) (EST) SBML MML
eptp00130 Populus tremula (European aspen) (EST) SBML MML
erg00130 Ehrlichia ruminantium Gardel SBML MML
eru00130 Ehrlichia ruminantium Welgevonden (South Africa) SBML MML
erw00130 Ehrlichia ruminantium Welgevonden (France) SBML MML
esa00130 Enterobacter sakazakii SBML MML
esbi00130 Sorghum bicolor (sorghum) (EST) SBML MML
esi00130 Exiguobacterium sibiricum SBML MML
esja00130 Schistosoma japonicum (fluke) (EST) SBML MML
esly00130 Solanum lycopersicum (tomato) (EST) SBML MML
esof00130 Saccharum officinarum (sugarcane) (EST) SBML MML
espu00130 Strongylocentrotus purpuratus (purple sea urchin) (EST) SBML MML
estu00130 Solanum tuberosum (potato) (EST) SBML MML
eta00130 Erwinia tasmaniensis SBML MML
etae00130 Triticum aestivum (wheat) (EST) SBML MML
evvi00130 Vitis vinifera (wine grape) (EST) SBML MML
ezel00130 (Undocumented) SBML MML
ezma00130 Zea mays (maize) (EST) SBML MML
fal00130 Frankia alni SBML MML
fgr00130 Fusarium graminearum SBML MML
fjo00130 Flavobacterium johnsoniae SBML MML
fnu00130 Fusobacterium nucleatum SBML MML
fph00130 Francisella philomiragia SBML MML
fps00130 Flavobacterium psychrophilum SBML MML
fra00130 Frankia sp. CcI3 SBML MML
fre00130 Frankia sp. EAN1pec SBML MML
fta00130 Francisella tularensis subsp. holarctica FTNF002-00 SBML MML
ftf00130 Francisella tularensis subsp. tularensis FSC 198 SBML MML
fth00130 Francisella tularensis subsp. holarctica OSU18 SBML MML
ftl00130 Francisella tularensis subsp. holarctica LVS SBML MML
ftm00130 Francisella tularensis subsp. mediasiatica FSC147 SBML MML
ftn00130 Francisella tularensis subsp. novicida U112 SBML MML
ftu00130 Francisella tularensis subsp. tularensis SCHU S4 SBML MML
ftw00130 Francisella tularensis subsp. tularensis WY96-3418 SBML MML
gbe00130 Granulobacter bethesdensis SBML MML
gdi00130 Gluconacetobacter diazotrophicus PAl 5 (Brazil) SBML MML
gfo00130 Gramella forsetii SBML MML
gga00130 Gallus gallus (chicken) SBML MML
gka00130 Geobacillus kaustophilus SBML MML
glo00130 Geobacter lovleyi SBML MML
gme00130 Geobacter metallireducens SBML MML
gox00130 Gluconobacter oxydans SBML MML
gsu00130 Geobacter sulfurreducens SBML MML
gtn00130 Geobacillus thermodenitrificans SBML MML
gur00130 Geobacter uraniumreducens SBML MML
gvi00130 Gloeobacter violaceus SBML MML
hac00130 Helicobacter acinonychis SBML MML
hal00130 Halobacterium sp. NRC-1 SBML MML
har00130 Herminiimonas arsenicoxydans SBML MML
hau00130 Herpetosiphon aurantiacus SBML MML
hbu00130 Hyperthermus butylicus SBML MML
hch00130 Hahella chejuensis SBML MML
hdu00130 Haemophilus ducreyi SBML MML
hha00130 Halorhodospira halophila SBML MML
hhe00130 Helicobacter hepaticus SBML MML
hin00130 Haemophilus influenzae Rd KW20 (serotype d) SBML MML
hip00130 Haemophilus influenzae PittEE SBML MML
hiq00130 Haemophilus influenzae PittGG SBML MML
hit00130 Haemophilus influenzae 86-028NP (nontypeable) SBML MML
hma00130 Haloarcula marismortui SBML MML
hmo00130 Heliobacterium modesticaldum SBML MML
hne00130 Hyphomonas neptunium SBML MML
hpa00130 Helicobacter pylori HPAG1 SBML MML
hpj00130 Helicobacter pylori J99 SBML MML
hpy00130 Helicobacter pylori 26695 SBML MML
hsa00130 Homo sapiens (human) SBML MML
hsl00130 Halobacterium salinarum R1 SBML MML
hsm00130 Haemophilus somnus 2336 SBML MML
hso00130 Haemophilus somnus 129PT SBML MML
hwa00130 Haloquadratum walsbyi SBML MML
iho00130 Ignicoccus hospitalis SBML MML
ilo00130 Idiomarina loihiensis SBML MML
jan00130 Jannaschia sp. CCS1 SBML MML
kcr00130 Candidatus Korarchaeum cryptofilum SBML MML
kla00130 Kluyveromyces lactis SBML MML
kpn00130 Klebsiella pneumoniae SBML MML
kra00130 Kineococcus radiotolerans SBML MML
krh00130 Kocuria rhizophila SBML MML
lbc00130 Laccaria bicolor SBML MML
lbf00130 Leptospira biflexa serovar Patoc Patoc 1 (Ames) SBML MML
lbi00130 Leptospira biflexa serovar Patoc Patoc 1 (Paris) SBML MML
lbj00130 Leptospira borgpetersenii JB197 SBML MML
lbl00130 Leptospira borgpetersenii L550 SBML MML
lbr00130 Lactobacillus brevis SBML MML
lch00130 Leptothrix cholodnii SBML MML
lci00130 Leuconostoc citreum SBML MML
lfe00130 Lactobacillus fermentum SBML MML
lga00130 Lactobacillus gasseri SBML MML
lic00130 Leptospira interrogans serovar Copenhageni SBML MML
lil00130 Leptospira interrogans serovar lai SBML MML
lin00130 Listeria innocua SBML MML
lip00130 Lawsonia intracellularis SBML MML
ljo00130 Lactobacillus johnsonii SBML MML
lla00130 Lactococcus lactis subsp. lactis IL1403 SBML MML
llc00130 Lactococcus lactis subsp. cremoris SK11 SBML MML
llm00130 Lactococcus lactis subsp. cremoris MG1363 SBML MML
lma00130 Leishmania major SBML MML
lme00130 Leuconostoc mesenteroides SBML MML
lmf00130 Listeria monocytogenes F2365 SBML MML
lmo00130 Listeria monocytogenes EGD-e SBML MML
lpc00130 Legionella pneumophila Corby SBML MML
lpf00130 Legionella pneumophila Lens SBML MML
lpl00130 Lactobacillus plantarum WCFS1 SBML MML
lpn00130 Legionella pneumophila Philadelphia 1 SBML MML
lpp00130 Legionella pneumophila Paris SBML MML
lre00130 Lactobacillus reuteri DSM 20016 SBML MML
lsl00130 Lactobacillus salivarius SBML MML
lsp00130 Lysinibacillus sphaericus SBML MML
lwe00130 Listeria welshimeri SLCC5334 SBML MML
lxx00130 Leifsonia xyli xyli CTCB07 SBML MML
mab00130 Mycobacterium abscessus ATCC 19977T SBML MML
mac00130 Methanosarcina acetivorans SBML MML
mae00130 Methanococcus aeolicus SBML MML
mag00130 Magnetospirillum magneticum SBML MML
maq00130 Marinobacter aquaeolei SBML MML
mar00130 Microcystis aeruginosa SBML MML
mav00130 Mycobacterium avium 104 SBML MML
mba00130 Methanosarcina barkeri SBML MML
mbb00130 Mycobacterium bovis BCG Pasteur 1173P2 SBML MML
mbn00130 Candidatus Methanoregula boonei SBML MML
mbo00130 Mycobacterium bovis AF2122/97 SBML MML
mbr00130 Monosiga brevicollis SBML MML
mbu00130 Methanococcoides burtonii SBML MML
mca00130 Methylococcus capsulatus SBML MML
mcc00130 Macaca mulatta (rhesus monkey) SBML MML
mdo00130 Monodelphis domestica (opossum) SBML MML
mem00130 Methanoculleus marisnigri SBML MML
mes00130 Mesorhizobium sp. BNC1 SBML MML
met00130 Methylobacterium sp. 4-46 SBML MML
mex00130 Methylobacterium extorquens SBML MML
mfa00130 Methylobacillus flagellatus SBML MML
mgi00130 Mycobacterium gilvum SBML MML
mgl00130 Malassezia globosa SBML MML
mgm00130 Magnetococcus sp. MC-1 SBML MML
mgr00130 Magnaporthe grisea SBML MML
mhu00130 Methanospirillum hungatei SBML MML
mja00130 Methanococcus jannaschii SBML MML
mjl00130 Mycobacterium sp. JLS SBML MML
mka00130 Methanopyrus kandleri SBML MML
mkm00130 Mycobacterium sp. KMS SBML MML
mla00130 Methanocorpusculum labreanum SBML MML
mle00130 Mycobacterium leprae TN SBML MML
mlo00130 Mesorhizobium loti SBML MML
mma00130 Methanosarcina mazei SBML MML
mmc00130 Mycobacterium sp. MCS SBML MML
mmi00130 Mycobacterium marinum M SBML MML
mmp00130 Methanococcus maripaludis S2 SBML MML
mmq00130 Methanococcus maripaludis C5 SBML MML
mmr00130 Maricaulis maris SBML MML
mms00130 Minibacterium massiliensis SBML MML
mmu00130 Mus musculus (mouse) SBML MML
mmw00130 Marinomonas sp. MWYL1 SBML MML
mmx00130 Methanococcus maripaludis C6 SBML MML
mmz00130 Methanococcus maripaludis C7 SBML MML
mpa00130 Mycobacterium avium paratuberculosis SBML MML
mpt00130 Methylibium petroleiphilum SBML MML
mra00130 Mycobacterium tuberculosis H37Ra SBML MML
mrd00130 Methylobacterium radiotolerans SBML MML
mse00130 Metallosphaera sedula SBML MML
msi00130 Methanobrevibacter smithii ATCC 35061 SBML MML
msm00130 Mycobacterium smegmatis SBML MML
mst00130 Methanosphaera stadtmanae SBML MML
msu00130 Mannheimia succiniciproducens SBML MML
mta00130 Moorella thermoacetica SBML MML
mtc00130 Mycobacterium tuberculosis CDC1551 SBML MML
mtf00130 Mycobacterium tuberculosis F11 SBML MML
mth00130 Methanobacterium thermoautotrophicum SBML MML
mtp00130 Methanosaeta thermophila SBML MML
mtu00130 Mycobacterium tuberculosis H37Rv SBML MML
mul00130 Mycobacterium ulcerans SBML MML
mva00130 Mycobacterium vanbaalenii SBML MML
mvn00130 Methanococcus vannielii SBML MML
mxa00130 Myxococcus xanthus SBML MML
nar00130 Novosphingobium aromaticivorans SBML MML
nca00130 Nocardioides sp. JS614 SBML MML
ncr00130 Neurospora crassa SBML MML
net00130 Nitrosomonas eutropha SBML MML
neu00130 Nitrosomonas europaea SBML MML
nfa00130 Nocardia farcinica SBML MML
ngo00130 Neisseria gonorrhoeae SBML MML
nha00130 Nitrobacter hamburgensis SBML MML
nis00130 Nitratiruptor sp. SB155-2 SBML MML
nma00130 Neisseria meningitidis Z2491 (serogroup A) SBML MML
nmc00130 Neisseria meningitidis FAM18 (serogroup C) SBML MML
nme00130 Neisseria meningitidis MC58 (serogroup B) SBML MML
nmn00130 Neisseria meningitidis 053442 (serogroup C) SBML MML
nmr00130 Nitrosopumilus maritimus SBML MML
nmu00130 Nitrosospira multiformis SBML MML
noc00130 Nitrosococcus oceani SBML MML
nph00130 Natronomonas pharaonis SBML MML
npu00130 Nostoc punctiforme SBML MML
nse00130 Neorickettsia sennetsu SBML MML
nve00130 Nematostella vectensis (sea anemone) SBML MML
nwi00130 Nitrobacter winogradskyi SBML MML
oaa00130 Ornithorhynchus anatinus (platypus) SBML MML
oan00130 Ochrobactrum anthropi SBML MML
oih00130 Oceanobacillus iheyensis SBML MML
olu00130 Ostreococcus lucimarinus SBML MML
ooe00130 Oenococcus oeni SBML MML
osa00130 Oryza sativa japonica (Japanese rice) SBML MML
ote00130 Opitutus terrae SBML MML
ots00130 Orientia tsutsugamushi Boryong SBML MML
ott00130 Orientia tsutsugamushi Ikeda SBML MML
pab00130 Pyrococcus abyssi SBML MML
pac00130 Propionibacterium acnes SBML MML
pae00130 Pseudomonas aeruginosa PAO1 SBML MML
pai00130 Pyrobaculum aerophilum SBML MML
pan00130 Podospora anserina SBML MML
pap00130 Pseudomonas aeruginosa PA7 SBML MML
par00130 Psychrobacter arcticum SBML MML
pas00130 Pyrobaculum arsenaticum SBML MML
pat00130 Pseudoalteromonas atlantica SBML MML
pau00130 Pseudomonas aeruginosa UCBPP-PA14 SBML MML
pca00130 Pelobacter carbinolicus SBML MML
pcl00130 Pyrobaculum calidifontis SBML MML
pcr00130 Psychrobacter cryohalolentis SBML MML
pcu00130 Candidatus Protochlamydia amoebophila SBML MML
pde00130 Paracoccus denitrificans SBML MML
pdi00130 Parabacteroides distasonis SBML MML
pen00130 Pseudomonas entomophila SBML MML
pfa00130 Plasmodium falciparum 3D7 SBML MML
pfl00130 Pseudomonas fluorescens Pf-5 SBML MML
pfo00130 Pseudomonas fluorescens Pf0-1 SBML MML
pfu00130 Pyrococcus furiosus SBML MML
pgi00130 Porphyromonas gingivalis W83 SBML MML
pha00130 Pseudoalteromonas haloplanktis SBML MML
pho00130 Pyrococcus horikoshii SBML MML
pic00130 Pichia stipitis SBML MML
pin00130 Psychromonas ingrahamii SBML MML
pis00130 Pyrobaculum islandicum SBML MML
pla00130 Parvibaculum lavamentivorans SBML MML
plt00130 Pelodictyon luteolum SBML MML
plu00130 Photorhabdus luminescens SBML MML
pma00130 Prochlorococcus marinus SS120 SBML MML
pmb00130 Prochlorococcus marinus AS9601 SBML MML
pmc00130 Prochlorococcus marinus MIT 9515 SBML MML
pme00130 Prochlorococcus marinus NATL1A SBML MML
pmf00130 Prochlorococcus marinus MIT 9303 SBML MML
pmg00130 Prochlorococcus marinus MIT 9301 SBML MML
pmh00130 Prochlorococcus marinus MIT 9215 SBML MML
pmi00130 Prochlorococcus marinus MIT9312 SBML MML
pmj00130 Prochlorococcus marinus MIT 9211 SBML MML
pmm00130 Prochlorococcus marinus MED4 SBML MML
pmn00130 Prochlorococcus marinus NATL2A SBML MML
pmo00130 Petrotoga mobilis SBML MML
pmt00130 Prochlorococcus marinus MIT9313 SBML MML
pmu00130 Pasteurella multocida SBML MML
pmy00130 Pseudomonas mendocina SBML MML
pna00130 Polaromonas naphthalenivorans SBML MML
pne00130 Polynucleobacter necessarius SBML MML
pnu00130 Polynucleobacter sp. QLW-P1DMWA-1 SBML MML
pol00130 Polaromonas sp. JS666 SBML MML
ppd00130 Pelobacter propionicus SBML MML
ppf00130 Pseudomonas putida F1 SBML MML
ppg00130 Pseudomonas putida GB-1 SBML MML
ppp00130 Physcomitrella patens subsp. patens SBML MML
ppr00130 Photobacterium profundum SBML MML
ppu00130 Pseudomonas putida KT2440 SBML MML
ppw00130 Pseudomonas putida W619 SBML MML
prw00130 Psychrobacter sp. PRwf-1 SBML MML
psa00130 Pseudomonas stutzeri SBML MML
psb00130 Pseudomonas syringae pv. syringae B728a SBML MML
psp00130 Pseudomonas syringae pv. phaseolicola 1448A SBML MML
pst00130 Pseudomonas syringae pv. tomato DC3000 SBML MML
pth00130 Pelotomaculum thermopropionicum SBML MML
pto00130 Picrophilus torridus SBML MML
ptr00130 Pan troglodytes (chimpanzee) SBML MML
pub00130 Candidatus Pelagibacter ubique SBML MML
pvi00130 Prosthecochloris vibrioformis SBML MML
pyo00130 Plasmodium yoelii SBML MML
rak00130 Rickettsia akari SBML MML
rba00130 Rhodopirellula baltica SBML MML
rbe00130 Rickettsia bellii RML369-C SBML MML
rbo00130 Rickettsia bellii OSU 85-389 SBML MML
rca00130 Roseiflexus castenholzii DSM13941 SBML MML
rci00130 Uncultured methanogenic archaeon RC-I SBML MML
rcm00130 Rickettsia canadensis SBML MML
rco00130 Rickettsia conorii SBML MML
rde00130 Roseobacter denitrificans SBML MML
rec00130 Rhizobium etli CIAT 652 SBML MML
reh00130 Ralstonia eutropha H16 SBML MML
ret00130 Rhizobium etli CFN 42 SBML MML
reu00130 Ralstonia eutropha JMP134 SBML MML
rfe00130 Rickettsia felis SBML MML
rfr00130 Rhodoferax ferrireducens SBML MML
rha00130 Rhodococcus sp. RHA1 SBML MML
rle00130 Rhizobium leguminosarum SBML MML
rma00130 Candidatus Ruthia magnifica SBML MML
rme00130 Ralstonia metallidurans SBML MML
rms00130 Rickettsia massiliae SBML MML
rno00130 Rattus norvegicus (rat) SBML MML
rpa00130 Rhodopseudomonas palustris CGA009 SBML MML
rpb00130 Rhodopseudomonas palustris HaA2 SBML MML
rpc00130 Rhodopseudomonas palustris BisB18 SBML MML
rpd00130 Rhodopseudomonas palustris BisB5 SBML MML
rpe00130 Rhodopseudomonas palustris BisA53 SBML MML
rpr00130 Rickettsia prowazekii SBML MML
rpt00130 Rhodopseudomonas palustris TIE-1 SBML MML
rri00130 Rickettsia rickettsii Sheila Smith SBML MML
rrj00130 Rickettsia rickettsii Iowa SBML MML
rrs00130 Roseiflexus sp. RS-1 SBML MML
rru00130 Rhodospirillum rubrum SBML MML
rsa00130 Renibacterium salmoninarum SBML MML
rsh00130 Rhodobacter sphaeroides ATCC 17029 SBML MML
rso00130 Ralstonia solanacearum SBML MML
rsp00130 Rhodobacter sphaeroides 2.4.1 SBML MML
rsq00130 Rhodobacter sphaeroides ATCC 17025 SBML MML
rty00130 Rickettsia typhi SBML MML
rxy00130 Rubrobacter xylanophilus SBML MML
saa00130 Staphylococcus aureus USA300 SBML MML
sab00130 Staphylococcus aureus RF122 SBML MML
sac00130 Staphylococcus aureus COL SBML MML
sae00130 Staphylococcus aureus Newman SBML MML
sah00130 Staphylococcus aureus JH1 SBML MML
sai00130 Sulfolobus acidocaldarius SBML MML
saj00130 Staphylococcus aureus JH9 SBML MML
sal00130 Sphingopyxis alaskensis SBML MML
sam00130 Staphylococcus aureus MW2 SBML MML
sao00130 Staphylococcus aureus NCTC8325 SBML MML
saq00130 Salinispora arenicola SBML MML
sar00130 Staphylococcus aureus MRSA252 SBML MML
sas00130 Staphylococcus aureus MSSA476 SBML MML
sat00130 Syntrophus aciditrophicus SBML MML
sau00130 Staphylococcus aureus N315 SBML MML
sav00130 Staphylococcus aureus Mu50 SBML MML
saw00130 Staphylococcus aureus Mu3 SBML MML
sax00130 Staphylococcus aureus USA300 TCH1516 SBML MML
saz00130 Shewanella amazonensis SBML MML
sbc00130 Shigella boydii CDC 3083-94 SBML MML
sbl00130 Shewanella baltica OS155 SBML MML
sbm00130 Shewanella baltica OS185 SBML MML
sbn00130 Shewanella baltica OS195 SBML MML
sbo00130 Shigella boydii Sb227 SBML MML
sce00130 Saccharomyces cerevisiae SBML MML
scl00130 Sorangium cellulosum SBML MML
sco00130 Streptomyces coelicolor SBML MML
sde00130 Saccharophagus degradans SBML MML
sdn00130 Shewanella denitrificans SBML MML
sdy00130 Shigella dysenteriae SBML MML
sec00130 Salmonella enterica subsp. enterica serovar Choleraesuis SBML MML
sen00130 Saccharopolyspora erythraea SBML MML
sep00130 Staphylococcus epidermidis ATCC 12228 SBML MML
ser00130 Staphylococcus epidermidis RP62A SBML MML
ses00130 Salmonella enterica subsp. arizonae SBML MML
sfl00130 Shigella flexneri 301 (serotype 2a) SBML MML
sfr00130 Shewanella frigidimarina SBML MML
sfu00130 Syntrophobacter fumaroxidans SBML MML
sfv00130 Shigella flexneri 8401 (serotype 5b) SBML MML
sfx00130 Shigella flexneri 2457T (serotype 2a) SBML MML
sgl00130 Sodalis glossinidius SBML MML
sgr00130 Streptomyces griseus SBML MML
sha00130 Staphylococcus haemolyticus SBML MML
she00130 Shewanella sp. MR-4 SBML MML
shl00130 Shewanella halifaxensis SBML MML
shm00130 Shewanella sp. MR-7 SBML MML
shn00130 Shewanella sp. ANA-3 SBML MML
shw00130 Shewanella sp. W3-18-1 SBML MML
sil00130 Ruegeria pomeroyi SBML MML
sit00130 Silicibacter sp. TM1040 SBML MML
slo00130 Shewanella loihica SBML MML
sma00130 Streptomyces avermitilis SBML MML
smd00130 Sinorhizobium medicae SBML MML
sme00130 Sinorhizobium meliloti SBML MML
smg00130 Candidatus Sulcia muelleri GWSS SBML MML
sml00130 Stenotrophomonas maltophilia SBML MML
smr00130 Staphylothermus marinus SBML MML
son00130 Shewanella oneidensis SBML MML
spc00130 Shewanella putrefaciens SBML MML
spe00130 Serratia proteamaculans SBML MML
spl00130 Shewanella pealeana SBML MML
spo00130 Schizosaccharomyces pombe SBML MML
spq00130 Salmonella enterica subsp. enterica serovar Paratyphi B SBML MML
spt00130 Salmonella enterica subsp. enterica serovar Paratyphi A SBML MML
spu00130 Strongylocentrotus purpuratus (purple sea urchin) SBML MML
sru00130 Salinibacter ruber SBML MML
sse00130 Shewanella sediminis SBML MML
ssn00130 Shigella sonnei SBML MML
sso00130 Sulfolobus solfataricus SBML MML
ssp00130 Staphylococcus saprophyticus SBML MML
sth00130 Symbiobacterium thermophilum SBML MML
stm00130 Salmonella typhimurium LT2 SBML MML
sto00130 Sulfolobus tokodaii SBML MML
stp00130 Salinispora tropica SBML MML
stt00130 Salmonella enterica subsp. enterica serovar Typhi Ty2 SBML MML
sty00130 Salmonella enterica subsp. enterica serovar Typhi CT18 SBML MML
sul00130 Sulfurihydrogenibium sp. YO3AOP1 SBML MML
sun00130 Sulfurovum sp. NBC37-1 SBML MML
sus00130 Solibacter usitatus SBML MML
swd00130 Shewanella woodyi ATCC 51908 SBML MML
swi00130 Sphingomonas wittichii SBML MML
swo00130 Syntrophomonas wolfei SBML MML
syc00130 Synechococcus elongatus PCC6301 SBML MML
syd00130 Synechococcus sp. CC9605 SBML MML
sye00130 Synechococcus sp. CC9902 SBML MML
syf00130 Synechococcus elongatus PCC7942 SBML MML
syg00130 Synechococcus sp. CC9311 SBML MML
syn00130 Synechocystis sp. PCC6803 SBML MML
syp00130 Synechococcus sp. PCC7002 SBML MML
syr00130 Synechococcus sp. RCC307 SBML MML
syw00130 Synechococcus sp. WH8102 SBML MML
syx00130 Synechococcus sp. WH7803 SBML MML
tac00130 Thermoplasma acidophilum SBML MML
tan00130 Theileria annulata SBML MML
tbd00130 Thiobacillus denitrificans SBML MML
tbr00130 Trypanosoma brucei SBML MML
tca00130 Tribolium castaneum (red flour beetle) SBML MML
tcr00130 Trypanosoma cruzi SBML MML
tcx00130 Thiomicrospira crunogena SBML MML
tdn00130 Thiomicrospira denitrificans SBML MML
tel00130 Thermosynechococcus elongatus SBML MML
ter00130 Trichodesmium erythraeum SBML MML
tet00130 Tetrahymena thermophila SBML MML
tex00130 Thermoanaerobacter sp. X514 SBML MML
tfu00130 Thermobifida fusca SBML MML
tko00130 Thermococcus kodakaraensis SBML MML
tle00130 Thermotoga lettingae SBML MML
tma00130 Thermotoga maritima SBML MML
tne00130 Thermoproteus neutrophilus SBML MML
tpd00130 Thermoanaerobacter pseudethanolicus SBML MML
tpe00130 Thermofilum pendens SBML MML
tpt00130 Thermotoga petrophila SBML MML
tpv00130 Theileria parva SBML MML
tte00130 Thermoanaerobacter tengcongensis SBML MML
tth00130 Thermus thermophilus HB27 SBML MML
ttj00130 Thermus thermophilus HB8 SBML MML
tvo00130 Thermoplasma volcanium SBML MML
twh00130 Tropheryma whipplei Twist SBML MML
tws00130 Tropheryma whipplei TW08/27 SBML MML
uma00130 Ustilago maydis SBML MML
vch00130 Vibrio cholerae O1 SBML MML
vco00130 Vibrio cholerae O395 SBML MML
vei00130 Verminephrobacter eiseniae SBML MML
vfi00130 Vibrio fischeri SBML MML
vha00130 Vibrio harveyi SBML MML
vok00130 Candidatus Vesicomyosocius okutanii SBML MML
vpa00130 Vibrio parahaemolyticus SBML MML
vpo00130 Vanderwaltozyma polyspora SBML MML
vvu00130 Vibrio vulnificus CMCP6 SBML MML
vvy00130 Vibrio vulnificus YJ016 SBML MML
wbm00130 Wolbachia wBm SBML MML
wbr00130 Wigglesworthia glossinidia SBML MML
wol00130 Wolbachia wMel SBML MML
wpi00130 Wolbachia pipientis SBML MML
wsu00130 Wolinella succinogenes SBML MML
xac00130 Xanthomonas axonopodis SBML MML
xau00130 Xanthobacter autotrophicus SBML MML
xcb00130 Xanthomonas campestris pv. campestris 8004 SBML MML
xcc00130 Xanthomonas campestris pv. campestris ATCC 33913 SBML MML
xcv00130 Xanthomonas campestris pv. vesicatoria SBML MML
xfa00130 Xylella fastidiosa 9a5c SBML MML
xfm00130 Xylella fastidiosa M12 SBML MML
xfn00130 Xylella fastidiosa M23 SBML MML
xft00130 Xylella fastidiosa Temecula1 SBML MML
xla00130 Xenopus laevis (African clawed frog) SBML MML
xom00130 Xanthomonas oryzae MAFF311018 SBML MML
xoo00130 Xanthomonas oryzae KACC10331 SBML MML
yen00130 Yersinia enterocolitica SBML MML
yli00130 Yarrowia lipolytica SBML MML
ypa00130 Yersinia pestis Antiqua SBML MML
ype00130 Yersinia pestis CO92 SBML MML
ypg00130 Yersinia pestis Angola SBML MML
ypi00130 Yersinia pseudotuberculosis IP31758 SBML MML
ypk00130 Yersinia pestis KIM SBML MML
ypm00130 Yersinia pestis Mediaevails SBML MML
ypn00130 Yersinia pestis Nepal516 SBML MML
ypp00130 Yersinia pestis Pestoides SBML MML
yps00130 Yersinia pseudotuberculosis IP32953 SBML MML
ypy00130 Yersinia pseudotuberculosis YPIII SBML MML
zmo00130 Zymomonas mobilis SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.