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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism zmo: Zymomonas mobilis

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
zmo00010 Glycolysis / Gluconeogenesis SBML MML
zmo00020 Citrate cycle (TCA cycle) SBML MML
zmo00030 Pentose phosphate pathway SBML MML
zmo00040 Pentose and glucuronate interconversions SBML MML
zmo00051 Fructose and mannose metabolism SBML MML
zmo00052 Galactose metabolism SBML MML
zmo00053 Ascorbate and aldarate metabolism SBML MML
zmo00061 Fatty acid biosynthesis SBML MML
zmo00100 (Undocumented) SBML MML
zmo00120 (Undocumented) SBML MML
zmo00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
zmo00220 (Undocumented) SBML MML
zmo00230 Purine metabolism SBML MML
zmo00240 Pyrimidine metabolism SBML MML
zmo00251 (Undocumented) SBML MML
zmo00252 (Undocumented) SBML MML
zmo00260 Glycine, serine and threonine metabolism SBML MML
zmo00271 (Undocumented) SBML MML
zmo00272 (Undocumented) SBML MML
zmo00280 Valine, leucine and isoleucine degradation SBML MML
zmo00281 Geraniol degradation SBML MML
zmo00290 Valine, leucine and isoleucine biosynthesis SBML MML
zmo00300 Lysine biosynthesis SBML MML
zmo00330 Arginine and proline metabolism SBML MML
zmo00340 Histidine metabolism SBML MML
zmo00350 Tyrosine metabolism SBML MML
zmo00360 Phenylalanine metabolism SBML MML
zmo00361 gamma-Hexachlorocyclohexane degradation SBML MML
zmo00362 (Undocumented) SBML MML
zmo00364 Fluorobenzoate degradation SBML MML
zmo00380 Tryptophan metabolism SBML MML
zmo00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
zmo00401 Novobiocin biosynthesis SBML MML
zmo00450 Selenoamino acid metabolism SBML MML
zmo00460 (Undocumented) SBML MML
zmo00471 D-Glutamine and D-glutamate metabolism SBML MML
zmo00473 D-Alanine metabolism SBML MML
zmo00480 Glutathione metabolism SBML MML
zmo00500 Starch and sucrose metabolism SBML MML
zmo00520 Amino sugar and nucleotide sugar metabolism SBML MML
zmo00530 (Undocumented) SBML MML
zmo00540 Lipopolysaccharide biosynthesis SBML MML
zmo00550 Peptidoglycan biosynthesis SBML MML
zmo00561 Glycerolipid metabolism SBML MML
zmo00564 Glycerophospholipid metabolism SBML MML
zmo00600 Sphingolipid metabolism SBML MML
zmo00620 Pyruvate metabolism SBML MML
zmo00623 2,4-Dichlorobenzoate degradation SBML MML
zmo00624 1- and 2-Methylnaphthalene degradation SBML MML
zmo00625 (Undocumented) SBML MML
zmo00626 Naphthalene and anthracene degradation SBML MML
zmo00627 1,4-Dichlorobenzene degradation SBML MML
zmo00630 Glyoxylate and dicarboxylate metabolism SBML MML
zmo00632 (Undocumented) SBML MML
zmo00640 Propanoate metabolism SBML MML
zmo00641 3-Chloroacrylic acid degradation SBML MML
zmo00650 Butanoate metabolism SBML MML
zmo00660 C5-Branched dibasic acid metabolism SBML MML
zmo00670 One carbon pool by folate SBML MML
zmo00680 Methane metabolism SBML MML
zmo00710 (Undocumented) SBML MML
zmo00720 (Undocumented) SBML MML
zmo00730 Thiamine metabolism SBML MML
zmo00740 Riboflavin metabolism SBML MML
zmo00750 Vitamin B6 metabolism SBML MML
zmo00760 Nicotinate and nicotinamide metabolism SBML MML
zmo00770 Pantothenate and CoA biosynthesis SBML MML
zmo00780 Biotin metabolism SBML MML
zmo00785 Lipoic acid metabolism SBML MML
zmo00790 Folate biosynthesis SBML MML
zmo00860 Porphyrin and chlorophyll metabolism SBML MML
zmo00900 Terpenoid backbone biosynthesis SBML MML
zmo00903 (Undocumented) SBML MML
zmo00910 Nitrogen metabolism SBML MML
zmo00920 Sulfur metabolism SBML MML
zmo00941 (Undocumented) SBML MML
zmo00950 (Undocumented) SBML MML
zmo00960 (Undocumented) SBML MML
zmo00970 Aminoacyl-tRNA biosynthesis SBML MML
zmo00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
zmo00982 (Undocumented) SBML MML
zmo00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.