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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism xcv: Xanthomonas campestris pv. vesicatoria

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
xcv00010 Glycolysis / Gluconeogenesis SBML MML
xcv00020 Citrate cycle (TCA cycle) SBML MML
xcv00030 Pentose phosphate pathway SBML MML
xcv00031 (Undocumented) SBML MML
xcv00040 Pentose and glucuronate interconversions SBML MML
xcv00051 Fructose and mannose metabolism SBML MML
xcv00052 Galactose metabolism SBML MML
xcv00053 Ascorbate and aldarate metabolism SBML MML
xcv00061 Fatty acid biosynthesis SBML MML
xcv00062 Fatty acid elongation in mitochondria SBML MML
xcv00071 Fatty acid metabolism SBML MML
xcv00072 Synthesis and degradation of ketone bodies SBML MML
xcv00100 (Undocumented) SBML MML
xcv00120 (Undocumented) SBML MML
xcv00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
xcv00140 (Undocumented) SBML MML
xcv00150 Androgen and estrogen metabolism SBML MML
xcv00220 (Undocumented) SBML MML
xcv00230 Purine metabolism SBML MML
xcv00240 Pyrimidine metabolism SBML MML
xcv00251 (Undocumented) SBML MML
xcv00252 (Undocumented) SBML MML
xcv00260 Glycine, serine and threonine metabolism SBML MML
xcv00271 (Undocumented) SBML MML
xcv00272 (Undocumented) SBML MML
xcv00280 Valine, leucine and isoleucine degradation SBML MML
xcv00281 Geraniol degradation SBML MML
xcv00290 Valine, leucine and isoleucine biosynthesis SBML MML
xcv00300 Lysine biosynthesis SBML MML
xcv00310 Lysine degradation SBML MML
xcv00311 Penicillin and cephalosporin biosynthesis SBML MML
xcv00330 Arginine and proline metabolism SBML MML
xcv00340 Histidine metabolism SBML MML
xcv00350 Tyrosine metabolism SBML MML
xcv00360 Phenylalanine metabolism SBML MML
xcv00361 gamma-Hexachlorocyclohexane degradation SBML MML
xcv00362 (Undocumented) SBML MML
xcv00364 Fluorobenzoate degradation SBML MML
xcv00380 Tryptophan metabolism SBML MML
xcv00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
xcv00401 Novobiocin biosynthesis SBML MML
xcv00410 beta-Alanine metabolism SBML MML
xcv00430 Taurine and hypotaurine metabolism SBML MML
xcv00450 Selenoamino acid metabolism SBML MML
xcv00460 (Undocumented) SBML MML
xcv00471 D-Glutamine and D-glutamate metabolism SBML MML
xcv00473 D-Alanine metabolism SBML MML
xcv00480 Glutathione metabolism SBML MML
xcv00500 Starch and sucrose metabolism SBML MML
xcv00520 Amino sugar and nucleotide sugar metabolism SBML MML
xcv00521 Streptomycin biosynthesis SBML MML
xcv00523 Polyketide sugar unit biosynthesis SBML MML
xcv00530 (Undocumented) SBML MML
xcv00540 Lipopolysaccharide biosynthesis SBML MML
xcv00550 Peptidoglycan biosynthesis SBML MML
xcv00561 Glycerolipid metabolism SBML MML
xcv00562 Inositol phosphate metabolism SBML MML
xcv00564 Glycerophospholipid metabolism SBML MML
xcv00565 Ether lipid metabolism SBML MML
xcv00590 Arachidonic acid metabolism SBML MML
xcv00591 Linoleic acid metabolism SBML MML
xcv00592 alpha-Linolenic acid metabolism SBML MML
xcv00600 Sphingolipid metabolism SBML MML
xcv00620 Pyruvate metabolism SBML MML
xcv00622 Toluene and xylene degradation SBML MML
xcv00623 2,4-Dichlorobenzoate degradation SBML MML
xcv00624 1- and 2-Methylnaphthalene degradation SBML MML
xcv00626 Naphthalene and anthracene degradation SBML MML
xcv00627 1,4-Dichlorobenzene degradation SBML MML
xcv00628 Fluorene degradation SBML MML
xcv00630 Glyoxylate and dicarboxylate metabolism SBML MML
xcv00631 1,2-Dichloroethane degradation SBML MML
xcv00632 (Undocumented) SBML MML
xcv00640 Propanoate metabolism SBML MML
xcv00641 3-Chloroacrylic acid degradation SBML MML
xcv00642 Ethylbenzene degradation SBML MML
xcv00643 Styrene degradation SBML MML
xcv00650 Butanoate metabolism SBML MML
xcv00660 C5-Branched dibasic acid metabolism SBML MML
xcv00670 One carbon pool by folate SBML MML
xcv00680 Methane metabolism SBML MML
xcv00710 (Undocumented) SBML MML
xcv00720 (Undocumented) SBML MML
xcv00730 Thiamine metabolism SBML MML
xcv00740 Riboflavin metabolism SBML MML
xcv00750 Vitamin B6 metabolism SBML MML
xcv00760 Nicotinate and nicotinamide metabolism SBML MML
xcv00770 Pantothenate and CoA biosynthesis SBML MML
xcv00780 Biotin metabolism SBML MML
xcv00785 Lipoic acid metabolism SBML MML
xcv00790 Folate biosynthesis SBML MML
xcv00860 Porphyrin and chlorophyll metabolism SBML MML
xcv00900 Terpenoid backbone biosynthesis SBML MML
xcv00903 (Undocumented) SBML MML
xcv00910 Nitrogen metabolism SBML MML
xcv00920 Sulfur metabolism SBML MML
xcv00930 Caprolactam degradation SBML MML
xcv00940 (Undocumented) SBML MML
xcv00950 (Undocumented) SBML MML
xcv00960 (Undocumented) SBML MML
xcv00970 Aminoacyl-tRNA biosynthesis SBML MML
xcv00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
xcv00982 (Undocumented) SBML MML
xcv00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.