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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism vpo: Vanderwaltozyma polyspora

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
vpo00010 Glycolysis / Gluconeogenesis SBML MML
vpo00020 Citrate cycle (TCA cycle) SBML MML
vpo00030 Pentose phosphate pathway SBML MML
vpo00040 Pentose and glucuronate interconversions SBML MML
vpo00051 Fructose and mannose metabolism SBML MML
vpo00052 Galactose metabolism SBML MML
vpo00061 Fatty acid biosynthesis SBML MML
vpo00071 Fatty acid metabolism SBML MML
vpo00072 Synthesis and degradation of ketone bodies SBML MML
vpo00100 (Undocumented) SBML MML
vpo00120 (Undocumented) SBML MML
vpo00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
vpo00220 (Undocumented) SBML MML
vpo00230 Purine metabolism SBML MML
vpo00240 Pyrimidine metabolism SBML MML
vpo00251 (Undocumented) SBML MML
vpo00252 (Undocumented) SBML MML
vpo00260 Glycine, serine and threonine metabolism SBML MML
vpo00271 (Undocumented) SBML MML
vpo00272 (Undocumented) SBML MML
vpo00280 Valine, leucine and isoleucine degradation SBML MML
vpo00281 Geraniol degradation SBML MML
vpo00290 Valine, leucine and isoleucine biosynthesis SBML MML
vpo00300 Lysine biosynthesis SBML MML
vpo00310 Lysine degradation SBML MML
vpo00330 Arginine and proline metabolism SBML MML
vpo00340 Histidine metabolism SBML MML
vpo00350 Tyrosine metabolism SBML MML
vpo00360 Phenylalanine metabolism SBML MML
vpo00361 gamma-Hexachlorocyclohexane degradation SBML MML
vpo00362 (Undocumented) SBML MML
vpo00363 Bisphenol A degradation SBML MML
vpo00364 Fluorobenzoate degradation SBML MML
vpo00380 Tryptophan metabolism SBML MML
vpo00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
vpo00401 Novobiocin biosynthesis SBML MML
vpo00410 beta-Alanine metabolism SBML MML
vpo00440 Phosphonate and phosphinate metabolism SBML MML
vpo00450 Selenoamino acid metabolism SBML MML
vpo00460 (Undocumented) SBML MML
vpo00472 D-Arginine and D-ornithine metabolism SBML MML
vpo00480 Glutathione metabolism SBML MML
vpo00500 Starch and sucrose metabolism SBML MML
vpo00510 (Undocumented) SBML MML
vpo00520 Amino sugar and nucleotide sugar metabolism SBML MML
vpo00521 Streptomycin biosynthesis SBML MML
vpo00530 (Undocumented) SBML MML
vpo00550 Peptidoglycan biosynthesis SBML MML
vpo00561 Glycerolipid metabolism SBML MML
vpo00562 Inositol phosphate metabolism SBML MML
vpo00564 Glycerophospholipid metabolism SBML MML
vpo00565 Ether lipid metabolism SBML MML
vpo00590 Arachidonic acid metabolism SBML MML
vpo00592 alpha-Linolenic acid metabolism SBML MML
vpo00600 Sphingolipid metabolism SBML MML
vpo00620 Pyruvate metabolism SBML MML
vpo00624 1- and 2-Methylnaphthalene degradation SBML MML
vpo00627 1,4-Dichlorobenzene degradation SBML MML
vpo00630 Glyoxylate and dicarboxylate metabolism SBML MML
vpo00632 (Undocumented) SBML MML
vpo00640 Propanoate metabolism SBML MML
vpo00641 3-Chloroacrylic acid degradation SBML MML
vpo00642 Ethylbenzene degradation SBML MML
vpo00650 Butanoate metabolism SBML MML
vpo00660 C5-Branched dibasic acid metabolism SBML MML
vpo00670 One carbon pool by folate SBML MML
vpo00680 Methane metabolism SBML MML
vpo00710 (Undocumented) SBML MML
vpo00720 (Undocumented) SBML MML
vpo00730 Thiamine metabolism SBML MML
vpo00740 Riboflavin metabolism SBML MML
vpo00750 Vitamin B6 metabolism SBML MML
vpo00760 Nicotinate and nicotinamide metabolism SBML MML
vpo00770 Pantothenate and CoA biosynthesis SBML MML
vpo00780 Biotin metabolism SBML MML
vpo00790 Folate biosynthesis SBML MML
vpo00860 Porphyrin and chlorophyll metabolism SBML MML
vpo00900 Terpenoid backbone biosynthesis SBML MML
vpo00903 (Undocumented) SBML MML
vpo00910 Nitrogen metabolism SBML MML
vpo00920 Sulfur metabolism SBML MML
vpo00930 Caprolactam degradation SBML MML
vpo00940 (Undocumented) SBML MML
vpo00941 (Undocumented) SBML MML
vpo00960 (Undocumented) SBML MML
vpo00970 Aminoacyl-tRNA biosynthesis SBML MML
vpo00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
vpo00982 (Undocumented) SBML MML
vpo00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.