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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism tcr: Trypanosoma cruzi

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
tcr00010 Glycolysis / Gluconeogenesis SBML MML
tcr00020 Citrate cycle (TCA cycle) SBML MML
tcr00030 Pentose phosphate pathway SBML MML
tcr00040 Pentose and glucuronate interconversions SBML MML
tcr00051 Fructose and mannose metabolism SBML MML
tcr00052 Galactose metabolism SBML MML
tcr00053 Ascorbate and aldarate metabolism SBML MML
tcr00061 Fatty acid biosynthesis SBML MML
tcr00062 Fatty acid elongation in mitochondria SBML MML
tcr00071 Fatty acid metabolism SBML MML
tcr00072 Synthesis and degradation of ketone bodies SBML MML
tcr00100 (Undocumented) SBML MML
tcr00120 (Undocumented) SBML MML
tcr00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
tcr00150 Androgen and estrogen metabolism SBML MML
tcr00220 (Undocumented) SBML MML
tcr00230 Purine metabolism SBML MML
tcr00240 Pyrimidine metabolism SBML MML
tcr00251 (Undocumented) SBML MML
tcr00252 (Undocumented) SBML MML
tcr00260 Glycine, serine and threonine metabolism SBML MML
tcr00271 (Undocumented) SBML MML
tcr00272 (Undocumented) SBML MML
tcr00280 Valine, leucine and isoleucine degradation SBML MML
tcr00281 Geraniol degradation SBML MML
tcr00290 Valine, leucine and isoleucine biosynthesis SBML MML
tcr00310 Lysine degradation SBML MML
tcr00330 Arginine and proline metabolism SBML MML
tcr00340 Histidine metabolism SBML MML
tcr00350 Tyrosine metabolism SBML MML
tcr00360 Phenylalanine metabolism SBML MML
tcr00361 gamma-Hexachlorocyclohexane degradation SBML MML
tcr00380 Tryptophan metabolism SBML MML
tcr00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
tcr00401 Novobiocin biosynthesis SBML MML
tcr00410 beta-Alanine metabolism SBML MML
tcr00440 Phosphonate and phosphinate metabolism SBML MML
tcr00450 Selenoamino acid metabolism SBML MML
tcr00460 (Undocumented) SBML MML
tcr00480 Glutathione metabolism SBML MML
tcr00500 Starch and sucrose metabolism SBML MML
tcr00510 (Undocumented) SBML MML
tcr00520 Amino sugar and nucleotide sugar metabolism SBML MML
tcr00521 Streptomycin biosynthesis SBML MML
tcr00530 (Undocumented) SBML MML
tcr00550 Peptidoglycan biosynthesis SBML MML
tcr00561 Glycerolipid metabolism SBML MML
tcr00562 Inositol phosphate metabolism SBML MML
tcr00564 Glycerophospholipid metabolism SBML MML
tcr00565 Ether lipid metabolism SBML MML
tcr00590 Arachidonic acid metabolism SBML MML
tcr00592 alpha-Linolenic acid metabolism SBML MML
tcr00600 Sphingolipid metabolism SBML MML
tcr00620 Pyruvate metabolism SBML MML
tcr00624 1- and 2-Methylnaphthalene degradation SBML MML
tcr00626 Naphthalene and anthracene degradation SBML MML
tcr00630 Glyoxylate and dicarboxylate metabolism SBML MML
tcr00632 (Undocumented) SBML MML
tcr00640 Propanoate metabolism SBML MML
tcr00641 3-Chloroacrylic acid degradation SBML MML
tcr00642 Ethylbenzene degradation SBML MML
tcr00650 Butanoate metabolism SBML MML
tcr00670 One carbon pool by folate SBML MML
tcr00710 (Undocumented) SBML MML
tcr00720 (Undocumented) SBML MML
tcr00740 Riboflavin metabolism SBML MML
tcr00750 Vitamin B6 metabolism SBML MML
tcr00760 Nicotinate and nicotinamide metabolism SBML MML
tcr00770 Pantothenate and CoA biosynthesis SBML MML
tcr00780 Biotin metabolism SBML MML
tcr00785 Lipoic acid metabolism SBML MML
tcr00790 Folate biosynthesis SBML MML
tcr00791 Atrazine degradation SBML MML
tcr00860 Porphyrin and chlorophyll metabolism SBML MML
tcr00900 Terpenoid backbone biosynthesis SBML MML
tcr00903 (Undocumented) SBML MML
tcr00910 Nitrogen metabolism SBML MML
tcr00920 Sulfur metabolism SBML MML
tcr00930 Caprolactam degradation SBML MML
tcr00950 (Undocumented) SBML MML
tcr00960 (Undocumented) SBML MML
tcr00970 Aminoacyl-tRNA biosynthesis SBML MML
tcr00982 (Undocumented) SBML MML
tcr00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.