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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism sun: Sulfurovum sp. NBC37-1

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
sun00010 Glycolysis / Gluconeogenesis SBML MML
sun00020 Citrate cycle (TCA cycle) SBML MML
sun00030 Pentose phosphate pathway SBML MML
sun00040 Pentose and glucuronate interconversions SBML MML
sun00051 Fructose and mannose metabolism SBML MML
sun00052 Galactose metabolism SBML MML
sun00061 Fatty acid biosynthesis SBML MML
sun00071 Fatty acid metabolism SBML MML
sun00100 (Undocumented) SBML MML
sun00120 (Undocumented) SBML MML
sun00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
sun00150 Androgen and estrogen metabolism SBML MML
sun00220 (Undocumented) SBML MML
sun00230 Purine metabolism SBML MML
sun00240 Pyrimidine metabolism SBML MML
sun00251 (Undocumented) SBML MML
sun00252 (Undocumented) SBML MML
sun00260 Glycine, serine and threonine metabolism SBML MML
sun00271 (Undocumented) SBML MML
sun00272 (Undocumented) SBML MML
sun00280 Valine, leucine and isoleucine degradation SBML MML
sun00290 Valine, leucine and isoleucine biosynthesis SBML MML
sun00300 Lysine biosynthesis SBML MML
sun00310 Lysine degradation SBML MML
sun00330 Arginine and proline metabolism SBML MML
sun00340 Histidine metabolism SBML MML
sun00350 Tyrosine metabolism SBML MML
sun00360 Phenylalanine metabolism SBML MML
sun00361 gamma-Hexachlorocyclohexane degradation SBML MML
sun00362 (Undocumented) SBML MML
sun00380 Tryptophan metabolism SBML MML
sun00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
sun00401 Novobiocin biosynthesis SBML MML
sun00410 beta-Alanine metabolism SBML MML
sun00430 Taurine and hypotaurine metabolism SBML MML
sun00450 Selenoamino acid metabolism SBML MML
sun00460 (Undocumented) SBML MML
sun00471 D-Glutamine and D-glutamate metabolism SBML MML
sun00473 D-Alanine metabolism SBML MML
sun00480 Glutathione metabolism SBML MML
sun00500 Starch and sucrose metabolism SBML MML
sun00520 Amino sugar and nucleotide sugar metabolism SBML MML
sun00521 Streptomycin biosynthesis SBML MML
sun00523 Polyketide sugar unit biosynthesis SBML MML
sun00530 (Undocumented) SBML MML
sun00540 Lipopolysaccharide biosynthesis SBML MML
sun00550 Peptidoglycan biosynthesis SBML MML
sun00561 Glycerolipid metabolism SBML MML
sun00564 Glycerophospholipid metabolism SBML MML
sun00620 Pyruvate metabolism SBML MML
sun00628 Fluorene degradation SBML MML
sun00630 Glyoxylate and dicarboxylate metabolism SBML MML
sun00632 (Undocumented) SBML MML
sun00640 Propanoate metabolism SBML MML
sun00643 Styrene degradation SBML MML
sun00650 Butanoate metabolism SBML MML
sun00660 C5-Branched dibasic acid metabolism SBML MML
sun00670 One carbon pool by folate SBML MML
sun00680 Methane metabolism SBML MML
sun00710 (Undocumented) SBML MML
sun00720 (Undocumented) SBML MML
sun00730 Thiamine metabolism SBML MML
sun00740 Riboflavin metabolism SBML MML
sun00750 Vitamin B6 metabolism SBML MML
sun00760 Nicotinate and nicotinamide metabolism SBML MML
sun00770 Pantothenate and CoA biosynthesis SBML MML
sun00780 Biotin metabolism SBML MML
sun00785 Lipoic acid metabolism SBML MML
sun00790 Folate biosynthesis SBML MML
sun00860 Porphyrin and chlorophyll metabolism SBML MML
sun00900 Terpenoid backbone biosynthesis SBML MML
sun00903 (Undocumented) SBML MML
sun00910 Nitrogen metabolism SBML MML
sun00920 Sulfur metabolism SBML MML
sun00940 (Undocumented) SBML MML
sun00950 (Undocumented) SBML MML
sun00970 Aminoacyl-tRNA biosynthesis SBML MML
sun00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.