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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism spz: Streptococcus pyogenes MGAS5005 (serotype M1)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
spz00010 Glycolysis / Gluconeogenesis SBML MML
spz00020 Citrate cycle (TCA cycle) SBML MML
spz00030 Pentose phosphate pathway SBML MML
spz00040 Pentose and glucuronate interconversions SBML MML
spz00051 Fructose and mannose metabolism SBML MML
spz00052 Galactose metabolism SBML MML
spz00053 Ascorbate and aldarate metabolism SBML MML
spz00061 Fatty acid biosynthesis SBML MML
spz00071 Fatty acid metabolism SBML MML
spz00072 Synthesis and degradation of ketone bodies SBML MML
spz00100 (Undocumented) SBML MML
spz00120 (Undocumented) SBML MML
spz00220 (Undocumented) SBML MML
spz00230 Purine metabolism SBML MML
spz00240 Pyrimidine metabolism SBML MML
spz00251 (Undocumented) SBML MML
spz00252 (Undocumented) SBML MML
spz00260 Glycine, serine and threonine metabolism SBML MML
spz00271 (Undocumented) SBML MML
spz00272 (Undocumented) SBML MML
spz00280 Valine, leucine and isoleucine degradation SBML MML
spz00281 Geraniol degradation SBML MML
spz00290 Valine, leucine and isoleucine biosynthesis SBML MML
spz00300 Lysine biosynthesis SBML MML
spz00310 Lysine degradation SBML MML
spz00330 Arginine and proline metabolism SBML MML
spz00340 Histidine metabolism SBML MML
spz00350 Tyrosine metabolism SBML MML
spz00360 Phenylalanine metabolism SBML MML
spz00361 gamma-Hexachlorocyclohexane degradation SBML MML
spz00380 Tryptophan metabolism SBML MML
spz00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
spz00410 beta-Alanine metabolism SBML MML
spz00430 Taurine and hypotaurine metabolism SBML MML
spz00450 Selenoamino acid metabolism SBML MML
spz00460 (Undocumented) SBML MML
spz00471 D-Glutamine and D-glutamate metabolism SBML MML
spz00473 D-Alanine metabolism SBML MML
spz00480 Glutathione metabolism SBML MML
spz00500 Starch and sucrose metabolism SBML MML
spz00520 Amino sugar and nucleotide sugar metabolism SBML MML
spz00521 Streptomycin biosynthesis SBML MML
spz00523 Polyketide sugar unit biosynthesis SBML MML
spz00530 (Undocumented) SBML MML
spz00550 Peptidoglycan biosynthesis SBML MML
spz00561 Glycerolipid metabolism SBML MML
spz00562 Inositol phosphate metabolism SBML MML
spz00564 Glycerophospholipid metabolism SBML MML
spz00590 Arachidonic acid metabolism SBML MML
spz00620 Pyruvate metabolism SBML MML
spz00624 1- and 2-Methylnaphthalene degradation SBML MML
spz00626 Naphthalene and anthracene degradation SBML MML
spz00630 Glyoxylate and dicarboxylate metabolism SBML MML
spz00632 (Undocumented) SBML MML
spz00640 Propanoate metabolism SBML MML
spz00641 3-Chloroacrylic acid degradation SBML MML
spz00643 Styrene degradation SBML MML
spz00650 Butanoate metabolism SBML MML
spz00670 One carbon pool by folate SBML MML
spz00680 Methane metabolism SBML MML
spz00710 (Undocumented) SBML MML
spz00730 Thiamine metabolism SBML MML
spz00740 Riboflavin metabolism SBML MML
spz00750 Vitamin B6 metabolism SBML MML
spz00760 Nicotinate and nicotinamide metabolism SBML MML
spz00770 Pantothenate and CoA biosynthesis SBML MML
spz00780 Biotin metabolism SBML MML
spz00785 Lipoic acid metabolism SBML MML
spz00790 Folate biosynthesis SBML MML
spz00791 Atrazine degradation SBML MML
spz00860 Porphyrin and chlorophyll metabolism SBML MML
spz00900 Terpenoid backbone biosynthesis SBML MML
spz00903 (Undocumented) SBML MML
spz00910 Nitrogen metabolism SBML MML
spz00920 Sulfur metabolism SBML MML
spz00930 Caprolactam degradation SBML MML
spz00940 (Undocumented) SBML MML
spz00960 (Undocumented) SBML MML
spz00970 Aminoacyl-tRNA biosynthesis SBML MML
spz00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
spz00982 (Undocumented) SBML MML
spz00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.