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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism spw: Streptococcus pneumoniae CGSP14 (serotype 14)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
spw00010 Glycolysis / Gluconeogenesis SBML MML
spw00030 Pentose phosphate pathway SBML MML
spw00040 Pentose and glucuronate interconversions SBML MML
spw00051 Fructose and mannose metabolism SBML MML
spw00052 Galactose metabolism SBML MML
spw00053 Ascorbate and aldarate metabolism SBML MML
spw00061 Fatty acid biosynthesis SBML MML
spw00071 Fatty acid metabolism SBML MML
spw00100 (Undocumented) SBML MML
spw00220 (Undocumented) SBML MML
spw00230 Purine metabolism SBML MML
spw00240 Pyrimidine metabolism SBML MML
spw00251 (Undocumented) SBML MML
spw00252 (Undocumented) SBML MML
spw00260 Glycine, serine and threonine metabolism SBML MML
spw00271 (Undocumented) SBML MML
spw00272 (Undocumented) SBML MML
spw00280 Valine, leucine and isoleucine degradation SBML MML
spw00290 Valine, leucine and isoleucine biosynthesis SBML MML
spw00300 Lysine biosynthesis SBML MML
spw00310 Lysine degradation SBML MML
spw00330 Arginine and proline metabolism SBML MML
spw00340 Histidine metabolism SBML MML
spw00350 Tyrosine metabolism SBML MML
spw00360 Phenylalanine metabolism SBML MML
spw00380 Tryptophan metabolism SBML MML
spw00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
spw00410 beta-Alanine metabolism SBML MML
spw00430 Taurine and hypotaurine metabolism SBML MML
spw00450 Selenoamino acid metabolism SBML MML
spw00460 (Undocumented) SBML MML
spw00471 D-Glutamine and D-glutamate metabolism SBML MML
spw00473 D-Alanine metabolism SBML MML
spw00480 Glutathione metabolism SBML MML
spw00500 Starch and sucrose metabolism SBML MML
spw00520 Amino sugar and nucleotide sugar metabolism SBML MML
spw00521 Streptomycin biosynthesis SBML MML
spw00530 (Undocumented) SBML MML
spw00550 Peptidoglycan biosynthesis SBML MML
spw00561 Glycerolipid metabolism SBML MML
spw00562 Inositol phosphate metabolism SBML MML
spw00564 Glycerophospholipid metabolism SBML MML
spw00590 Arachidonic acid metabolism SBML MML
spw00600 Sphingolipid metabolism SBML MML
spw00620 Pyruvate metabolism SBML MML
spw00624 1- and 2-Methylnaphthalene degradation SBML MML
spw00630 Glyoxylate and dicarboxylate metabolism SBML MML
spw00632 (Undocumented) SBML MML
spw00640 Propanoate metabolism SBML MML
spw00641 3-Chloroacrylic acid degradation SBML MML
spw00650 Butanoate metabolism SBML MML
spw00660 C5-Branched dibasic acid metabolism SBML MML
spw00670 One carbon pool by folate SBML MML
spw00680 Methane metabolism SBML MML
spw00710 (Undocumented) SBML MML
spw00720 (Undocumented) SBML MML
spw00730 Thiamine metabolism SBML MML
spw00740 Riboflavin metabolism SBML MML
spw00750 Vitamin B6 metabolism SBML MML
spw00760 Nicotinate and nicotinamide metabolism SBML MML
spw00770 Pantothenate and CoA biosynthesis SBML MML
spw00780 Biotin metabolism SBML MML
spw00785 Lipoic acid metabolism SBML MML
spw00790 Folate biosynthesis SBML MML
spw00860 Porphyrin and chlorophyll metabolism SBML MML
spw00900 Terpenoid backbone biosynthesis SBML MML
spw00903 (Undocumented) SBML MML
spw00910 Nitrogen metabolism SBML MML
spw00920 Sulfur metabolism SBML MML
spw00960 (Undocumented) SBML MML
spw00970 Aminoacyl-tRNA biosynthesis SBML MML
spw00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
spw00982 (Undocumented) SBML MML
spw00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.