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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism spv: Streptococcus pneumoniae Hungary19A 6

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
spv00010 Glycolysis / Gluconeogenesis SBML MML
spv00030 Pentose phosphate pathway SBML MML
spv00040 Pentose and glucuronate interconversions SBML MML
spv00051 Fructose and mannose metabolism SBML MML
spv00052 Galactose metabolism SBML MML
spv00053 Ascorbate and aldarate metabolism SBML MML
spv00061 Fatty acid biosynthesis SBML MML
spv00071 Fatty acid metabolism SBML MML
spv00100 (Undocumented) SBML MML
spv00220 (Undocumented) SBML MML
spv00230 Purine metabolism SBML MML
spv00240 Pyrimidine metabolism SBML MML
spv00251 (Undocumented) SBML MML
spv00252 (Undocumented) SBML MML
spv00260 Glycine, serine and threonine metabolism SBML MML
spv00271 (Undocumented) SBML MML
spv00272 (Undocumented) SBML MML
spv00280 Valine, leucine and isoleucine degradation SBML MML
spv00281 Geraniol degradation SBML MML
spv00290 Valine, leucine and isoleucine biosynthesis SBML MML
spv00300 Lysine biosynthesis SBML MML
spv00310 Lysine degradation SBML MML
spv00330 Arginine and proline metabolism SBML MML
spv00340 Histidine metabolism SBML MML
spv00350 Tyrosine metabolism SBML MML
spv00380 Tryptophan metabolism SBML MML
spv00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
spv00410 beta-Alanine metabolism SBML MML
spv00430 Taurine and hypotaurine metabolism SBML MML
spv00440 Phosphonate and phosphinate metabolism SBML MML
spv00450 Selenoamino acid metabolism SBML MML
spv00460 (Undocumented) SBML MML
spv00471 D-Glutamine and D-glutamate metabolism SBML MML
spv00473 D-Alanine metabolism SBML MML
spv00480 Glutathione metabolism SBML MML
spv00500 Starch and sucrose metabolism SBML MML
spv00520 Amino sugar and nucleotide sugar metabolism SBML MML
spv00521 Streptomycin biosynthesis SBML MML
spv00523 Polyketide sugar unit biosynthesis SBML MML
spv00530 (Undocumented) SBML MML
spv00550 Peptidoglycan biosynthesis SBML MML
spv00561 Glycerolipid metabolism SBML MML
spv00562 Inositol phosphate metabolism SBML MML
spv00564 Glycerophospholipid metabolism SBML MML
spv00590 Arachidonic acid metabolism SBML MML
spv00600 Sphingolipid metabolism SBML MML
spv00620 Pyruvate metabolism SBML MML
spv00624 1- and 2-Methylnaphthalene degradation SBML MML
spv00626 Naphthalene and anthracene degradation SBML MML
spv00630 Glyoxylate and dicarboxylate metabolism SBML MML
spv00632 (Undocumented) SBML MML
spv00640 Propanoate metabolism SBML MML
spv00641 3-Chloroacrylic acid degradation SBML MML
spv00650 Butanoate metabolism SBML MML
spv00660 C5-Branched dibasic acid metabolism SBML MML
spv00670 One carbon pool by folate SBML MML
spv00680 Methane metabolism SBML MML
spv00710 (Undocumented) SBML MML
spv00730 Thiamine metabolism SBML MML
spv00740 Riboflavin metabolism SBML MML
spv00750 Vitamin B6 metabolism SBML MML
spv00760 Nicotinate and nicotinamide metabolism SBML MML
spv00770 Pantothenate and CoA biosynthesis SBML MML
spv00780 Biotin metabolism SBML MML
spv00790 Folate biosynthesis SBML MML
spv00791 Atrazine degradation SBML MML
spv00860 Porphyrin and chlorophyll metabolism SBML MML
spv00900 Terpenoid backbone biosynthesis SBML MML
spv00903 (Undocumented) SBML MML
spv00910 Nitrogen metabolism SBML MML
spv00920 Sulfur metabolism SBML MML
spv00970 Aminoacyl-tRNA biosynthesis SBML MML
spv00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
spv00982 (Undocumented) SBML MML
spv00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.