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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism spr: Streptococcus pneumoniae R6

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
spr00010 Glycolysis / Gluconeogenesis SBML MML
spr00030 Pentose phosphate pathway SBML MML
spr00040 Pentose and glucuronate interconversions SBML MML
spr00051 Fructose and mannose metabolism SBML MML
spr00052 Galactose metabolism SBML MML
spr00053 Ascorbate and aldarate metabolism SBML MML
spr00061 Fatty acid biosynthesis SBML MML
spr00071 Fatty acid metabolism SBML MML
spr00100 (Undocumented) SBML MML
spr00120 (Undocumented) SBML MML
spr00220 (Undocumented) SBML MML
spr00230 Purine metabolism SBML MML
spr00240 Pyrimidine metabolism SBML MML
spr00251 (Undocumented) SBML MML
spr00252 (Undocumented) SBML MML
spr00260 Glycine, serine and threonine metabolism SBML MML
spr00271 (Undocumented) SBML MML
spr00272 (Undocumented) SBML MML
spr00280 Valine, leucine and isoleucine degradation SBML MML
spr00290 Valine, leucine and isoleucine biosynthesis SBML MML
spr00300 Lysine biosynthesis SBML MML
spr00310 Lysine degradation SBML MML
spr00330 Arginine and proline metabolism SBML MML
spr00340 Histidine metabolism SBML MML
spr00350 Tyrosine metabolism SBML MML
spr00360 Phenylalanine metabolism SBML MML
spr00362 (Undocumented) SBML MML
spr00380 Tryptophan metabolism SBML MML
spr00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
spr00410 beta-Alanine metabolism SBML MML
spr00430 Taurine and hypotaurine metabolism SBML MML
spr00450 Selenoamino acid metabolism SBML MML
spr00460 (Undocumented) SBML MML
spr00471 D-Glutamine and D-glutamate metabolism SBML MML
spr00473 D-Alanine metabolism SBML MML
spr00480 Glutathione metabolism SBML MML
spr00500 Starch and sucrose metabolism SBML MML
spr00520 Amino sugar and nucleotide sugar metabolism SBML MML
spr00521 Streptomycin biosynthesis SBML MML
spr00523 Polyketide sugar unit biosynthesis SBML MML
spr00530 (Undocumented) SBML MML
spr00550 Peptidoglycan biosynthesis SBML MML
spr00561 Glycerolipid metabolism SBML MML
spr00562 Inositol phosphate metabolism SBML MML
spr00564 Glycerophospholipid metabolism SBML MML
spr00590 Arachidonic acid metabolism SBML MML
spr00600 Sphingolipid metabolism SBML MML
spr00620 Pyruvate metabolism SBML MML
spr00624 1- and 2-Methylnaphthalene degradation SBML MML
spr00628 Fluorene degradation SBML MML
spr00630 Glyoxylate and dicarboxylate metabolism SBML MML
spr00632 (Undocumented) SBML MML
spr00640 Propanoate metabolism SBML MML
spr00641 3-Chloroacrylic acid degradation SBML MML
spr00650 Butanoate metabolism SBML MML
spr00660 C5-Branched dibasic acid metabolism SBML MML
spr00670 One carbon pool by folate SBML MML
spr00680 Methane metabolism SBML MML
spr00710 (Undocumented) SBML MML
spr00720 (Undocumented) SBML MML
spr00730 Thiamine metabolism SBML MML
spr00740 Riboflavin metabolism SBML MML
spr00750 Vitamin B6 metabolism SBML MML
spr00760 Nicotinate and nicotinamide metabolism SBML MML
spr00770 Pantothenate and CoA biosynthesis SBML MML
spr00780 Biotin metabolism SBML MML
spr00785 Lipoic acid metabolism SBML MML
spr00790 Folate biosynthesis SBML MML
spr00860 Porphyrin and chlorophyll metabolism SBML MML
spr00900 Terpenoid backbone biosynthesis SBML MML
spr00903 (Undocumented) SBML MML
spr00910 Nitrogen metabolism SBML MML
spr00920 Sulfur metabolism SBML MML
spr00930 Caprolactam degradation SBML MML
spr00940 (Undocumented) SBML MML
spr00950 (Undocumented) SBML MML
spr00960 (Undocumented) SBML MML
spr00970 Aminoacyl-tRNA biosynthesis SBML MML
spr00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
spr00982 (Undocumented) SBML MML
spr00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.