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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism spi: Streptococcus pyogenes MGAS10750 (serotype M4)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
spi00010 Glycolysis / Gluconeogenesis SBML MML
spi00020 Citrate cycle (TCA cycle) SBML MML
spi00030 Pentose phosphate pathway SBML MML
spi00040 Pentose and glucuronate interconversions SBML MML
spi00051 Fructose and mannose metabolism SBML MML
spi00052 Galactose metabolism SBML MML
spi00053 Ascorbate and aldarate metabolism SBML MML
spi00061 Fatty acid biosynthesis SBML MML
spi00071 Fatty acid metabolism SBML MML
spi00072 Synthesis and degradation of ketone bodies SBML MML
spi00100 (Undocumented) SBML MML
spi00220 (Undocumented) SBML MML
spi00230 Purine metabolism SBML MML
spi00240 Pyrimidine metabolism SBML MML
spi00251 (Undocumented) SBML MML
spi00252 (Undocumented) SBML MML
spi00260 Glycine, serine and threonine metabolism SBML MML
spi00271 (Undocumented) SBML MML
spi00272 (Undocumented) SBML MML
spi00280 Valine, leucine and isoleucine degradation SBML MML
spi00290 Valine, leucine and isoleucine biosynthesis SBML MML
spi00300 Lysine biosynthesis SBML MML
spi00310 Lysine degradation SBML MML
spi00330 Arginine and proline metabolism SBML MML
spi00340 Histidine metabolism SBML MML
spi00350 Tyrosine metabolism SBML MML
spi00360 Phenylalanine metabolism SBML MML
spi00361 gamma-Hexachlorocyclohexane degradation SBML MML
spi00380 Tryptophan metabolism SBML MML
spi00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
spi00410 beta-Alanine metabolism SBML MML
spi00430 Taurine and hypotaurine metabolism SBML MML
spi00450 Selenoamino acid metabolism SBML MML
spi00460 (Undocumented) SBML MML
spi00471 D-Glutamine and D-glutamate metabolism SBML MML
spi00473 D-Alanine metabolism SBML MML
spi00480 Glutathione metabolism SBML MML
spi00500 Starch and sucrose metabolism SBML MML
spi00520 Amino sugar and nucleotide sugar metabolism SBML MML
spi00521 Streptomycin biosynthesis SBML MML
spi00523 Polyketide sugar unit biosynthesis SBML MML
spi00530 (Undocumented) SBML MML
spi00550 Peptidoglycan biosynthesis SBML MML
spi00561 Glycerolipid metabolism SBML MML
spi00562 Inositol phosphate metabolism SBML MML
spi00564 Glycerophospholipid metabolism SBML MML
spi00590 Arachidonic acid metabolism SBML MML
spi00620 Pyruvate metabolism SBML MML
spi00624 1- and 2-Methylnaphthalene degradation SBML MML
spi00626 Naphthalene and anthracene degradation SBML MML
spi00630 Glyoxylate and dicarboxylate metabolism SBML MML
spi00632 (Undocumented) SBML MML
spi00640 Propanoate metabolism SBML MML
spi00641 3-Chloroacrylic acid degradation SBML MML
spi00643 Styrene degradation SBML MML
spi00650 Butanoate metabolism SBML MML
spi00670 One carbon pool by folate SBML MML
spi00710 (Undocumented) SBML MML
spi00730 Thiamine metabolism SBML MML
spi00740 Riboflavin metabolism SBML MML
spi00750 Vitamin B6 metabolism SBML MML
spi00760 Nicotinate and nicotinamide metabolism SBML MML
spi00770 Pantothenate and CoA biosynthesis SBML MML
spi00780 Biotin metabolism SBML MML
spi00785 Lipoic acid metabolism SBML MML
spi00790 Folate biosynthesis SBML MML
spi00791 Atrazine degradation SBML MML
spi00860 Porphyrin and chlorophyll metabolism SBML MML
spi00900 Terpenoid backbone biosynthesis SBML MML
spi00903 (Undocumented) SBML MML
spi00910 Nitrogen metabolism SBML MML
spi00920 Sulfur metabolism SBML MML
spi00930 Caprolactam degradation SBML MML
spi00940 (Undocumented) SBML MML
spi00960 (Undocumented) SBML MML
spi00970 Aminoacyl-tRNA biosynthesis SBML MML
spi00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
spi00982 (Undocumented) SBML MML
spi00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.