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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism san: Streptococcus agalactiae NEM316 (serotype III)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
san00010 Glycolysis / Gluconeogenesis SBML MML
san00030 Pentose phosphate pathway SBML MML
san00040 Pentose and glucuronate interconversions SBML MML
san00051 Fructose and mannose metabolism SBML MML
san00052 Galactose metabolism SBML MML
san00053 Ascorbate and aldarate metabolism SBML MML
san00061 Fatty acid biosynthesis SBML MML
san00071 Fatty acid metabolism SBML MML
san00100 (Undocumented) SBML MML
san00220 (Undocumented) SBML MML
san00230 Purine metabolism SBML MML
san00240 Pyrimidine metabolism SBML MML
san00251 (Undocumented) SBML MML
san00252 (Undocumented) SBML MML
san00260 Glycine, serine and threonine metabolism SBML MML
san00271 (Undocumented) SBML MML
san00272 (Undocumented) SBML MML
san00280 Valine, leucine and isoleucine degradation SBML MML
san00290 Valine, leucine and isoleucine biosynthesis SBML MML
san00300 Lysine biosynthesis SBML MML
san00330 Arginine and proline metabolism SBML MML
san00340 Histidine metabolism SBML MML
san00350 Tyrosine metabolism SBML MML
san00360 Phenylalanine metabolism SBML MML
san00361 gamma-Hexachlorocyclohexane degradation SBML MML
san00380 Tryptophan metabolism SBML MML
san00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
san00430 Taurine and hypotaurine metabolism SBML MML
san00440 Phosphonate and phosphinate metabolism SBML MML
san00450 Selenoamino acid metabolism SBML MML
san00460 (Undocumented) SBML MML
san00471 D-Glutamine and D-glutamate metabolism SBML MML
san00473 D-Alanine metabolism SBML MML
san00480 Glutathione metabolism SBML MML
san00500 Starch and sucrose metabolism SBML MML
san00520 Amino sugar and nucleotide sugar metabolism SBML MML
san00521 Streptomycin biosynthesis SBML MML
san00523 Polyketide sugar unit biosynthesis SBML MML
san00530 (Undocumented) SBML MML
san00550 Peptidoglycan biosynthesis SBML MML
san00561 Glycerolipid metabolism SBML MML
san00562 Inositol phosphate metabolism SBML MML
san00564 Glycerophospholipid metabolism SBML MML
san00620 Pyruvate metabolism SBML MML
san00624 1- and 2-Methylnaphthalene degradation SBML MML
san00630 Glyoxylate and dicarboxylate metabolism SBML MML
san00632 (Undocumented) SBML MML
san00640 Propanoate metabolism SBML MML
san00641 3-Chloroacrylic acid degradation SBML MML
san00643 Styrene degradation SBML MML
san00650 Butanoate metabolism SBML MML
san00660 C5-Branched dibasic acid metabolism SBML MML
san00670 One carbon pool by folate SBML MML
san00680 Methane metabolism SBML MML
san00710 (Undocumented) SBML MML
san00730 Thiamine metabolism SBML MML
san00740 Riboflavin metabolism SBML MML
san00750 Vitamin B6 metabolism SBML MML
san00760 Nicotinate and nicotinamide metabolism SBML MML
san00770 Pantothenate and CoA biosynthesis SBML MML
san00780 Biotin metabolism SBML MML
san00785 Lipoic acid metabolism SBML MML
san00790 Folate biosynthesis SBML MML
san00860 Porphyrin and chlorophyll metabolism SBML MML
san00900 Terpenoid backbone biosynthesis SBML MML
san00903 (Undocumented) SBML MML
san00910 Nitrogen metabolism SBML MML
san00920 Sulfur metabolism SBML MML
san00960 (Undocumented) SBML MML
san00970 Aminoacyl-tRNA biosynthesis SBML MML
san00982 (Undocumented) SBML MML
san00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.