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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism pyo: Plasmodium yoelii

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
pyo00010 Glycolysis / Gluconeogenesis SBML MML
pyo00020 Citrate cycle (TCA cycle) SBML MML
pyo00030 Pentose phosphate pathway SBML MML
pyo00051 Fructose and mannose metabolism SBML MML
pyo00061 Fatty acid biosynthesis SBML MML
pyo00071 Fatty acid metabolism SBML MML
pyo00100 (Undocumented) SBML MML
pyo00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
pyo00220 (Undocumented) SBML MML
pyo00230 Purine metabolism SBML MML
pyo00240 Pyrimidine metabolism SBML MML
pyo00251 (Undocumented) SBML MML
pyo00252 (Undocumented) SBML MML
pyo00260 Glycine, serine and threonine metabolism SBML MML
pyo00271 (Undocumented) SBML MML
pyo00272 (Undocumented) SBML MML
pyo00280 Valine, leucine and isoleucine degradation SBML MML
pyo00290 Valine, leucine and isoleucine biosynthesis SBML MML
pyo00310 Lysine degradation SBML MML
pyo00330 Arginine and proline metabolism SBML MML
pyo00340 Histidine metabolism SBML MML
pyo00350 Tyrosine metabolism SBML MML
pyo00360 Phenylalanine metabolism SBML MML
pyo00361 gamma-Hexachlorocyclohexane degradation SBML MML
pyo00380 Tryptophan metabolism SBML MML
pyo00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
pyo00410 beta-Alanine metabolism SBML MML
pyo00440 Phosphonate and phosphinate metabolism SBML MML
pyo00450 Selenoamino acid metabolism SBML MML
pyo00460 (Undocumented) SBML MML
pyo00480 Glutathione metabolism SBML MML
pyo00500 Starch and sucrose metabolism SBML MML
pyo00510 (Undocumented) SBML MML
pyo00521 Streptomycin biosynthesis SBML MML
pyo00530 (Undocumented) SBML MML
pyo00550 Peptidoglycan biosynthesis SBML MML
pyo00561 Glycerolipid metabolism SBML MML
pyo00562 Inositol phosphate metabolism SBML MML
pyo00564 Glycerophospholipid metabolism SBML MML
pyo00565 Ether lipid metabolism SBML MML
pyo00620 Pyruvate metabolism SBML MML
pyo00624 1- and 2-Methylnaphthalene degradation SBML MML
pyo00630 Glyoxylate and dicarboxylate metabolism SBML MML
pyo00632 (Undocumented) SBML MML
pyo00640 Propanoate metabolism SBML MML
pyo00650 Butanoate metabolism SBML MML
pyo00670 One carbon pool by folate SBML MML
pyo00680 Methane metabolism SBML MML
pyo00710 (Undocumented) SBML MML
pyo00720 (Undocumented) SBML MML
pyo00730 Thiamine metabolism SBML MML
pyo00740 Riboflavin metabolism SBML MML
pyo00750 Vitamin B6 metabolism SBML MML
pyo00760 Nicotinate and nicotinamide metabolism SBML MML
pyo00770 Pantothenate and CoA biosynthesis SBML MML
pyo00785 Lipoic acid metabolism SBML MML
pyo00790 Folate biosynthesis SBML MML
pyo00860 Porphyrin and chlorophyll metabolism SBML MML
pyo00910 Nitrogen metabolism SBML MML
pyo00940 (Undocumented) SBML MML
pyo00960 (Undocumented) SBML MML
pyo00970 Aminoacyl-tRNA biosynthesis SBML MML
pyo00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
pyo00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.