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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ptr: Pan troglodytes (chimpanzee)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ptr00010 Glycolysis / Gluconeogenesis SBML MML
ptr00020 Citrate cycle (TCA cycle) SBML MML
ptr00030 Pentose phosphate pathway SBML MML
ptr00031 (Undocumented) SBML MML
ptr00040 Pentose and glucuronate interconversions SBML MML
ptr00051 Fructose and mannose metabolism SBML MML
ptr00052 Galactose metabolism SBML MML
ptr00053 Ascorbate and aldarate metabolism SBML MML
ptr00061 Fatty acid biosynthesis SBML MML
ptr00062 Fatty acid elongation in mitochondria SBML MML
ptr00071 Fatty acid metabolism SBML MML
ptr00072 Synthesis and degradation of ketone bodies SBML MML
ptr00100 (Undocumented) SBML MML
ptr00120 (Undocumented) SBML MML
ptr00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ptr00140 (Undocumented) SBML MML
ptr00150 Androgen and estrogen metabolism SBML MML
ptr00220 (Undocumented) SBML MML
ptr00230 Purine metabolism SBML MML
ptr00232 Caffeine metabolism SBML MML
ptr00240 Pyrimidine metabolism SBML MML
ptr00251 (Undocumented) SBML MML
ptr00252 (Undocumented) SBML MML
ptr00260 Glycine, serine and threonine metabolism SBML MML
ptr00271 (Undocumented) SBML MML
ptr00272 (Undocumented) SBML MML
ptr00280 Valine, leucine and isoleucine degradation SBML MML
ptr00281 Geraniol degradation SBML MML
ptr00290 Valine, leucine and isoleucine biosynthesis SBML MML
ptr00300 Lysine biosynthesis SBML MML
ptr00310 Lysine degradation SBML MML
ptr00330 Arginine and proline metabolism SBML MML
ptr00340 Histidine metabolism SBML MML
ptr00350 Tyrosine metabolism SBML MML
ptr00360 Phenylalanine metabolism SBML MML
ptr00361 gamma-Hexachlorocyclohexane degradation SBML MML
ptr00363 Bisphenol A degradation SBML MML
ptr00380 Tryptophan metabolism SBML MML
ptr00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ptr00401 Novobiocin biosynthesis SBML MML
ptr00410 beta-Alanine metabolism SBML MML
ptr00430 Taurine and hypotaurine metabolism SBML MML
ptr00440 Phosphonate and phosphinate metabolism SBML MML
ptr00450 Selenoamino acid metabolism SBML MML
ptr00460 (Undocumented) SBML MML
ptr00471 D-Glutamine and D-glutamate metabolism SBML MML
ptr00472 D-Arginine and D-ornithine metabolism SBML MML
ptr00480 Glutathione metabolism SBML MML
ptr00500 Starch and sucrose metabolism SBML MML
ptr00510 (Undocumented) SBML MML
ptr00520 Amino sugar and nucleotide sugar metabolism SBML MML
ptr00521 Streptomycin biosynthesis SBML MML
ptr00530 (Undocumented) SBML MML
ptr00550 Peptidoglycan biosynthesis SBML MML
ptr00561 Glycerolipid metabolism SBML MML
ptr00562 Inositol phosphate metabolism SBML MML
ptr00564 Glycerophospholipid metabolism SBML MML
ptr00565 Ether lipid metabolism SBML MML
ptr00590 Arachidonic acid metabolism SBML MML
ptr00591 Linoleic acid metabolism SBML MML
ptr00592 alpha-Linolenic acid metabolism SBML MML
ptr00600 Sphingolipid metabolism SBML MML
ptr00620 Pyruvate metabolism SBML MML
ptr00624 1- and 2-Methylnaphthalene degradation SBML MML
ptr00625 (Undocumented) SBML MML
ptr00626 Naphthalene and anthracene degradation SBML MML
ptr00630 Glyoxylate and dicarboxylate metabolism SBML MML
ptr00632 (Undocumented) SBML MML
ptr00640 Propanoate metabolism SBML MML
ptr00641 3-Chloroacrylic acid degradation SBML MML
ptr00643 Styrene degradation SBML MML
ptr00650 Butanoate metabolism SBML MML
ptr00660 C5-Branched dibasic acid metabolism SBML MML
ptr00670 One carbon pool by folate SBML MML
ptr00680 Methane metabolism SBML MML
ptr00710 (Undocumented) SBML MML
ptr00720 (Undocumented) SBML MML
ptr00730 Thiamine metabolism SBML MML
ptr00740 Riboflavin metabolism SBML MML
ptr00750 Vitamin B6 metabolism SBML MML
ptr00760 Nicotinate and nicotinamide metabolism SBML MML
ptr00770 Pantothenate and CoA biosynthesis SBML MML
ptr00780 Biotin metabolism SBML MML
ptr00785 Lipoic acid metabolism SBML MML
ptr00790 Folate biosynthesis SBML MML
ptr00791 Atrazine degradation SBML MML
ptr00830 Retinol metabolism SBML MML
ptr00860 Porphyrin and chlorophyll metabolism SBML MML
ptr00900 Terpenoid backbone biosynthesis SBML MML
ptr00902 Monoterpenoid biosynthesis SBML MML
ptr00903 (Undocumented) SBML MML
ptr00910 Nitrogen metabolism SBML MML
ptr00920 Sulfur metabolism SBML MML
ptr00930 Caprolactam degradation SBML MML
ptr00940 (Undocumented) SBML MML
ptr00950 (Undocumented) SBML MML
ptr00960 (Undocumented) SBML MML
ptr00970 Aminoacyl-tRNA biosynthesis SBML MML
ptr00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
ptr00982 (Undocumented) SBML MML
ptr00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.