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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism prw: Psychrobacter sp. PRwf-1

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
prw00010 Glycolysis / Gluconeogenesis SBML MML
prw00020 Citrate cycle (TCA cycle) SBML MML
prw00030 Pentose phosphate pathway SBML MML
prw00031 (Undocumented) SBML MML
prw00040 Pentose and glucuronate interconversions SBML MML
prw00051 Fructose and mannose metabolism SBML MML
prw00052 Galactose metabolism SBML MML
prw00053 Ascorbate and aldarate metabolism SBML MML
prw00061 Fatty acid biosynthesis SBML MML
prw00062 Fatty acid elongation in mitochondria SBML MML
prw00071 Fatty acid metabolism SBML MML
prw00072 Synthesis and degradation of ketone bodies SBML MML
prw00100 (Undocumented) SBML MML
prw00120 (Undocumented) SBML MML
prw00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
prw00140 (Undocumented) SBML MML
prw00150 Androgen and estrogen metabolism SBML MML
prw00220 (Undocumented) SBML MML
prw00230 Purine metabolism SBML MML
prw00240 Pyrimidine metabolism SBML MML
prw00251 (Undocumented) SBML MML
prw00252 (Undocumented) SBML MML
prw00260 Glycine, serine and threonine metabolism SBML MML
prw00271 (Undocumented) SBML MML
prw00272 (Undocumented) SBML MML
prw00280 Valine, leucine and isoleucine degradation SBML MML
prw00281 Geraniol degradation SBML MML
prw00290 Valine, leucine and isoleucine biosynthesis SBML MML
prw00300 Lysine biosynthesis SBML MML
prw00310 Lysine degradation SBML MML
prw00330 Arginine and proline metabolism SBML MML
prw00340 Histidine metabolism SBML MML
prw00350 Tyrosine metabolism SBML MML
prw00360 Phenylalanine metabolism SBML MML
prw00361 gamma-Hexachlorocyclohexane degradation SBML MML
prw00362 (Undocumented) SBML MML
prw00364 Fluorobenzoate degradation SBML MML
prw00380 Tryptophan metabolism SBML MML
prw00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
prw00401 Novobiocin biosynthesis SBML MML
prw00410 beta-Alanine metabolism SBML MML
prw00430 Taurine and hypotaurine metabolism SBML MML
prw00450 Selenoamino acid metabolism SBML MML
prw00460 (Undocumented) SBML MML
prw00471 D-Glutamine and D-glutamate metabolism SBML MML
prw00473 D-Alanine metabolism SBML MML
prw00480 Glutathione metabolism SBML MML
prw00500 Starch and sucrose metabolism SBML MML
prw00520 Amino sugar and nucleotide sugar metabolism SBML MML
prw00530 (Undocumented) SBML MML
prw00540 Lipopolysaccharide biosynthesis SBML MML
prw00550 Peptidoglycan biosynthesis SBML MML
prw00561 Glycerolipid metabolism SBML MML
prw00562 Inositol phosphate metabolism SBML MML
prw00564 Glycerophospholipid metabolism SBML MML
prw00590 Arachidonic acid metabolism SBML MML
prw00592 alpha-Linolenic acid metabolism SBML MML
prw00620 Pyruvate metabolism SBML MML
prw00624 1- and 2-Methylnaphthalene degradation SBML MML
prw00626 Naphthalene and anthracene degradation SBML MML
prw00627 1,4-Dichlorobenzene degradation SBML MML
prw00630 Glyoxylate and dicarboxylate metabolism SBML MML
prw00632 (Undocumented) SBML MML
prw00633 Trinitrotoluene degradation SBML MML
prw00640 Propanoate metabolism SBML MML
prw00641 3-Chloroacrylic acid degradation SBML MML
prw00642 Ethylbenzene degradation SBML MML
prw00643 Styrene degradation SBML MML
prw00650 Butanoate metabolism SBML MML
prw00660 C5-Branched dibasic acid metabolism SBML MML
prw00670 One carbon pool by folate SBML MML
prw00680 Methane metabolism SBML MML
prw00710 (Undocumented) SBML MML
prw00720 (Undocumented) SBML MML
prw00730 Thiamine metabolism SBML MML
prw00740 Riboflavin metabolism SBML MML
prw00750 Vitamin B6 metabolism SBML MML
prw00760 Nicotinate and nicotinamide metabolism SBML MML
prw00770 Pantothenate and CoA biosynthesis SBML MML
prw00780 Biotin metabolism SBML MML
prw00790 Folate biosynthesis SBML MML
prw00791 Atrazine degradation SBML MML
prw00860 Porphyrin and chlorophyll metabolism SBML MML
prw00900 Terpenoid backbone biosynthesis SBML MML
prw00903 (Undocumented) SBML MML
prw00910 Nitrogen metabolism SBML MML
prw00920 Sulfur metabolism SBML MML
prw00930 Caprolactam degradation SBML MML
prw00940 (Undocumented) SBML MML
prw00950 (Undocumented) SBML MML
prw00960 (Undocumented) SBML MML
prw00970 Aminoacyl-tRNA biosynthesis SBML MML
prw00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
prw00982 (Undocumented) SBML MML
prw00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.