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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism pmu: Pasteurella multocida

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
pmu00010 Glycolysis / Gluconeogenesis SBML MML
pmu00020 Citrate cycle (TCA cycle) SBML MML
pmu00030 Pentose phosphate pathway SBML MML
pmu00040 Pentose and glucuronate interconversions SBML MML
pmu00051 Fructose and mannose metabolism SBML MML
pmu00052 Galactose metabolism SBML MML
pmu00053 Ascorbate and aldarate metabolism SBML MML
pmu00061 Fatty acid biosynthesis SBML MML
pmu00071 Fatty acid metabolism SBML MML
pmu00100 (Undocumented) SBML MML
pmu00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
pmu00220 (Undocumented) SBML MML
pmu00230 Purine metabolism SBML MML
pmu00240 Pyrimidine metabolism SBML MML
pmu00251 (Undocumented) SBML MML
pmu00252 (Undocumented) SBML MML
pmu00260 Glycine, serine and threonine metabolism SBML MML
pmu00271 (Undocumented) SBML MML
pmu00272 (Undocumented) SBML MML
pmu00280 Valine, leucine and isoleucine degradation SBML MML
pmu00290 Valine, leucine and isoleucine biosynthesis SBML MML
pmu00300 Lysine biosynthesis SBML MML
pmu00310 Lysine degradation SBML MML
pmu00330 Arginine and proline metabolism SBML MML
pmu00340 Histidine metabolism SBML MML
pmu00350 Tyrosine metabolism SBML MML
pmu00360 Phenylalanine metabolism SBML MML
pmu00361 gamma-Hexachlorocyclohexane degradation SBML MML
pmu00362 (Undocumented) SBML MML
pmu00380 Tryptophan metabolism SBML MML
pmu00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
pmu00401 Novobiocin biosynthesis SBML MML
pmu00430 Taurine and hypotaurine metabolism SBML MML
pmu00450 Selenoamino acid metabolism SBML MML
pmu00460 (Undocumented) SBML MML
pmu00471 D-Glutamine and D-glutamate metabolism SBML MML
pmu00473 D-Alanine metabolism SBML MML
pmu00480 Glutathione metabolism SBML MML
pmu00500 Starch and sucrose metabolism SBML MML
pmu00520 Amino sugar and nucleotide sugar metabolism SBML MML
pmu00521 Streptomycin biosynthesis SBML MML
pmu00530 (Undocumented) SBML MML
pmu00540 Lipopolysaccharide biosynthesis SBML MML
pmu00550 Peptidoglycan biosynthesis SBML MML
pmu00561 Glycerolipid metabolism SBML MML
pmu00562 Inositol phosphate metabolism SBML MML
pmu00564 Glycerophospholipid metabolism SBML MML
pmu00620 Pyruvate metabolism SBML MML
pmu00624 1- and 2-Methylnaphthalene degradation SBML MML
pmu00630 Glyoxylate and dicarboxylate metabolism SBML MML
pmu00632 (Undocumented) SBML MML
pmu00640 Propanoate metabolism SBML MML
pmu00641 3-Chloroacrylic acid degradation SBML MML
pmu00650 Butanoate metabolism SBML MML
pmu00660 C5-Branched dibasic acid metabolism SBML MML
pmu00670 One carbon pool by folate SBML MML
pmu00680 Methane metabolism SBML MML
pmu00710 (Undocumented) SBML MML
pmu00720 (Undocumented) SBML MML
pmu00730 Thiamine metabolism SBML MML
pmu00740 Riboflavin metabolism SBML MML
pmu00750 Vitamin B6 metabolism SBML MML
pmu00760 Nicotinate and nicotinamide metabolism SBML MML
pmu00770 Pantothenate and CoA biosynthesis SBML MML
pmu00780 Biotin metabolism SBML MML
pmu00785 Lipoic acid metabolism SBML MML
pmu00790 Folate biosynthesis SBML MML
pmu00860 Porphyrin and chlorophyll metabolism SBML MML
pmu00900 Terpenoid backbone biosynthesis SBML MML
pmu00903 (Undocumented) SBML MML
pmu00910 Nitrogen metabolism SBML MML
pmu00920 Sulfur metabolism SBML MML
pmu00930 Caprolactam degradation SBML MML
pmu00940 (Undocumented) SBML MML
pmu00950 (Undocumented) SBML MML
pmu00960 (Undocumented) SBML MML
pmu00970 Aminoacyl-tRNA biosynthesis SBML MML
pmu00982 (Undocumented) SBML MML
pmu00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.