This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ots: Orientia tsutsugamushi Boryong

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ots00010 Glycolysis / Gluconeogenesis SBML MML
ots00020 Citrate cycle (TCA cycle) SBML MML
ots00061 Fatty acid biosynthesis SBML MML
ots00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ots00230 Purine metabolism SBML MML
ots00240 Pyrimidine metabolism SBML MML
ots00251 (Undocumented) SBML MML
ots00252 (Undocumented) SBML MML
ots00260 Glycine, serine and threonine metabolism SBML MML
ots00271 (Undocumented) SBML MML
ots00272 (Undocumented) SBML MML
ots00280 Valine, leucine and isoleucine degradation SBML MML
ots00290 Valine, leucine and isoleucine biosynthesis SBML MML
ots00300 Lysine biosynthesis SBML MML
ots00310 Lysine degradation SBML MML
ots00330 Arginine and proline metabolism SBML MML
ots00380 Tryptophan metabolism SBML MML
ots00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ots00471 D-Glutamine and D-glutamate metabolism SBML MML
ots00480 Glutathione metabolism SBML MML
ots00530 (Undocumented) SBML MML
ots00550 Peptidoglycan biosynthesis SBML MML
ots00564 Glycerophospholipid metabolism SBML MML
ots00620 Pyruvate metabolism SBML MML
ots00630 Glyoxylate and dicarboxylate metabolism SBML MML
ots00670 One carbon pool by folate SBML MML
ots00710 (Undocumented) SBML MML
ots00720 (Undocumented) SBML MML
ots00770 Pantothenate and CoA biosynthesis SBML MML
ots00785 Lipoic acid metabolism SBML MML
ots00790 Folate biosynthesis SBML MML
ots00791 Atrazine degradation SBML MML
ots00860 Porphyrin and chlorophyll metabolism SBML MML
ots00900 Terpenoid backbone biosynthesis SBML MML
ots00910 Nitrogen metabolism SBML MML
ots00970 Aminoacyl-tRNA biosynthesis SBML MML
ots00980 Metabolism of xenobiotics by cytochrome P450 SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.