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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ooe: Oenococcus oeni

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ooe00010 Glycolysis / Gluconeogenesis SBML MML
ooe00020 Citrate cycle (TCA cycle) SBML MML
ooe00030 Pentose phosphate pathway SBML MML
ooe00040 Pentose and glucuronate interconversions SBML MML
ooe00051 Fructose and mannose metabolism SBML MML
ooe00052 Galactose metabolism SBML MML
ooe00053 Ascorbate and aldarate metabolism SBML MML
ooe00061 Fatty acid biosynthesis SBML MML
ooe00071 Fatty acid metabolism SBML MML
ooe00072 Synthesis and degradation of ketone bodies SBML MML
ooe00100 (Undocumented) SBML MML
ooe00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ooe00220 (Undocumented) SBML MML
ooe00230 Purine metabolism SBML MML
ooe00240 Pyrimidine metabolism SBML MML
ooe00251 (Undocumented) SBML MML
ooe00252 (Undocumented) SBML MML
ooe00260 Glycine, serine and threonine metabolism SBML MML
ooe00271 (Undocumented) SBML MML
ooe00272 (Undocumented) SBML MML
ooe00280 Valine, leucine and isoleucine degradation SBML MML
ooe00290 Valine, leucine and isoleucine biosynthesis SBML MML
ooe00300 Lysine biosynthesis SBML MML
ooe00330 Arginine and proline metabolism SBML MML
ooe00350 Tyrosine metabolism SBML MML
ooe00380 Tryptophan metabolism SBML MML
ooe00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ooe00430 Taurine and hypotaurine metabolism SBML MML
ooe00450 Selenoamino acid metabolism SBML MML
ooe00460 (Undocumented) SBML MML
ooe00471 D-Glutamine and D-glutamate metabolism SBML MML
ooe00473 D-Alanine metabolism SBML MML
ooe00480 Glutathione metabolism SBML MML
ooe00500 Starch and sucrose metabolism SBML MML
ooe00520 Amino sugar and nucleotide sugar metabolism SBML MML
ooe00521 Streptomycin biosynthesis SBML MML
ooe00523 Polyketide sugar unit biosynthesis SBML MML
ooe00530 (Undocumented) SBML MML
ooe00550 Peptidoglycan biosynthesis SBML MML
ooe00561 Glycerolipid metabolism SBML MML
ooe00564 Glycerophospholipid metabolism SBML MML
ooe00590 Arachidonic acid metabolism SBML MML
ooe00600 Sphingolipid metabolism SBML MML
ooe00620 Pyruvate metabolism SBML MML
ooe00624 1- and 2-Methylnaphthalene degradation SBML MML
ooe00630 Glyoxylate and dicarboxylate metabolism SBML MML
ooe00632 (Undocumented) SBML MML
ooe00640 Propanoate metabolism SBML MML
ooe00641 3-Chloroacrylic acid degradation SBML MML
ooe00643 Styrene degradation SBML MML
ooe00650 Butanoate metabolism SBML MML
ooe00660 C5-Branched dibasic acid metabolism SBML MML
ooe00670 One carbon pool by folate SBML MML
ooe00680 Methane metabolism SBML MML
ooe00710 (Undocumented) SBML MML
ooe00730 Thiamine metabolism SBML MML
ooe00740 Riboflavin metabolism SBML MML
ooe00750 Vitamin B6 metabolism SBML MML
ooe00760 Nicotinate and nicotinamide metabolism SBML MML
ooe00770 Pantothenate and CoA biosynthesis SBML MML
ooe00780 Biotin metabolism SBML MML
ooe00785 Lipoic acid metabolism SBML MML
ooe00790 Folate biosynthesis SBML MML
ooe00900 Terpenoid backbone biosynthesis SBML MML
ooe00910 Nitrogen metabolism SBML MML
ooe00920 Sulfur metabolism SBML MML
ooe00970 Aminoacyl-tRNA biosynthesis SBML MML
ooe00982 (Undocumented) SBML MML
ooe00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.