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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism nmn: Neisseria meningitidis 053442 (serogroup C)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
nmn00010 Glycolysis / Gluconeogenesis SBML MML
nmn00020 Citrate cycle (TCA cycle) SBML MML
nmn00030 Pentose phosphate pathway SBML MML
nmn00040 Pentose and glucuronate interconversions SBML MML
nmn00051 Fructose and mannose metabolism SBML MML
nmn00052 Galactose metabolism SBML MML
nmn00061 Fatty acid biosynthesis SBML MML
nmn00071 Fatty acid metabolism SBML MML
nmn00100 (Undocumented) SBML MML
nmn00120 (Undocumented) SBML MML
nmn00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
nmn00150 Androgen and estrogen metabolism SBML MML
nmn00220 (Undocumented) SBML MML
nmn00230 Purine metabolism SBML MML
nmn00240 Pyrimidine metabolism SBML MML
nmn00251 (Undocumented) SBML MML
nmn00252 (Undocumented) SBML MML
nmn00260 Glycine, serine and threonine metabolism SBML MML
nmn00271 (Undocumented) SBML MML
nmn00272 (Undocumented) SBML MML
nmn00280 Valine, leucine and isoleucine degradation SBML MML
nmn00290 Valine, leucine and isoleucine biosynthesis SBML MML
nmn00300 Lysine biosynthesis SBML MML
nmn00310 Lysine degradation SBML MML
nmn00330 Arginine and proline metabolism SBML MML
nmn00340 Histidine metabolism SBML MML
nmn00350 Tyrosine metabolism SBML MML
nmn00360 Phenylalanine metabolism SBML MML
nmn00361 gamma-Hexachlorocyclohexane degradation SBML MML
nmn00363 Bisphenol A degradation SBML MML
nmn00380 Tryptophan metabolism SBML MML
nmn00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
nmn00401 Novobiocin biosynthesis SBML MML
nmn00410 beta-Alanine metabolism SBML MML
nmn00430 Taurine and hypotaurine metabolism SBML MML
nmn00450 Selenoamino acid metabolism SBML MML
nmn00460 (Undocumented) SBML MML
nmn00471 D-Glutamine and D-glutamate metabolism SBML MML
nmn00473 D-Alanine metabolism SBML MML
nmn00480 Glutathione metabolism SBML MML
nmn00500 Starch and sucrose metabolism SBML MML
nmn00520 Amino sugar and nucleotide sugar metabolism SBML MML
nmn00521 Streptomycin biosynthesis SBML MML
nmn00523 Polyketide sugar unit biosynthesis SBML MML
nmn00530 (Undocumented) SBML MML
nmn00540 Lipopolysaccharide biosynthesis SBML MML
nmn00550 Peptidoglycan biosynthesis SBML MML
nmn00561 Glycerolipid metabolism SBML MML
nmn00562 Inositol phosphate metabolism SBML MML
nmn00564 Glycerophospholipid metabolism SBML MML
nmn00590 Arachidonic acid metabolism SBML MML
nmn00620 Pyruvate metabolism SBML MML
nmn00622 Toluene and xylene degradation SBML MML
nmn00624 1- and 2-Methylnaphthalene degradation SBML MML
nmn00626 Naphthalene and anthracene degradation SBML MML
nmn00627 1,4-Dichlorobenzene degradation SBML MML
nmn00630 Glyoxylate and dicarboxylate metabolism SBML MML
nmn00632 (Undocumented) SBML MML
nmn00640 Propanoate metabolism SBML MML
nmn00641 3-Chloroacrylic acid degradation SBML MML
nmn00650 Butanoate metabolism SBML MML
nmn00660 C5-Branched dibasic acid metabolism SBML MML
nmn00670 One carbon pool by folate SBML MML
nmn00680 Methane metabolism SBML MML
nmn00710 (Undocumented) SBML MML
nmn00720 (Undocumented) SBML MML
nmn00730 Thiamine metabolism SBML MML
nmn00740 Riboflavin metabolism SBML MML
nmn00750 Vitamin B6 metabolism SBML MML
nmn00760 Nicotinate and nicotinamide metabolism SBML MML
nmn00770 Pantothenate and CoA biosynthesis SBML MML
nmn00780 Biotin metabolism SBML MML
nmn00790 Folate biosynthesis SBML MML
nmn00860 Porphyrin and chlorophyll metabolism SBML MML
nmn00900 Terpenoid backbone biosynthesis SBML MML
nmn00903 (Undocumented) SBML MML
nmn00910 Nitrogen metabolism SBML MML
nmn00920 Sulfur metabolism SBML MML
nmn00950 (Undocumented) SBML MML
nmn00970 Aminoacyl-tRNA biosynthesis SBML MML
nmn00982 (Undocumented) SBML MML
nmn00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.