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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ngo: Neisseria gonorrhoeae

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ngo00010 Glycolysis / Gluconeogenesis SBML MML
ngo00020 Citrate cycle (TCA cycle) SBML MML
ngo00030 Pentose phosphate pathway SBML MML
ngo00040 Pentose and glucuronate interconversions SBML MML
ngo00051 Fructose and mannose metabolism SBML MML
ngo00052 Galactose metabolism SBML MML
ngo00061 Fatty acid biosynthesis SBML MML
ngo00071 Fatty acid metabolism SBML MML
ngo00100 (Undocumented) SBML MML
ngo00120 (Undocumented) SBML MML
ngo00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ngo00220 (Undocumented) SBML MML
ngo00230 Purine metabolism SBML MML
ngo00240 Pyrimidine metabolism SBML MML
ngo00251 (Undocumented) SBML MML
ngo00252 (Undocumented) SBML MML
ngo00260 Glycine, serine and threonine metabolism SBML MML
ngo00271 (Undocumented) SBML MML
ngo00272 (Undocumented) SBML MML
ngo00280 Valine, leucine and isoleucine degradation SBML MML
ngo00281 Geraniol degradation SBML MML
ngo00290 Valine, leucine and isoleucine biosynthesis SBML MML
ngo00300 Lysine biosynthesis SBML MML
ngo00310 Lysine degradation SBML MML
ngo00330 Arginine and proline metabolism SBML MML
ngo00340 Histidine metabolism SBML MML
ngo00350 Tyrosine metabolism SBML MML
ngo00360 Phenylalanine metabolism SBML MML
ngo00380 Tryptophan metabolism SBML MML
ngo00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ngo00401 Novobiocin biosynthesis SBML MML
ngo00410 beta-Alanine metabolism SBML MML
ngo00430 Taurine and hypotaurine metabolism SBML MML
ngo00450 Selenoamino acid metabolism SBML MML
ngo00460 (Undocumented) SBML MML
ngo00471 D-Glutamine and D-glutamate metabolism SBML MML
ngo00473 D-Alanine metabolism SBML MML
ngo00480 Glutathione metabolism SBML MML
ngo00500 Starch and sucrose metabolism SBML MML
ngo00520 Amino sugar and nucleotide sugar metabolism SBML MML
ngo00521 Streptomycin biosynthesis SBML MML
ngo00523 Polyketide sugar unit biosynthesis SBML MML
ngo00530 (Undocumented) SBML MML
ngo00540 Lipopolysaccharide biosynthesis SBML MML
ngo00550 Peptidoglycan biosynthesis SBML MML
ngo00561 Glycerolipid metabolism SBML MML
ngo00562 Inositol phosphate metabolism SBML MML
ngo00564 Glycerophospholipid metabolism SBML MML
ngo00620 Pyruvate metabolism SBML MML
ngo00624 1- and 2-Methylnaphthalene degradation SBML MML
ngo00630 Glyoxylate and dicarboxylate metabolism SBML MML
ngo00640 Propanoate metabolism SBML MML
ngo00641 3-Chloroacrylic acid degradation SBML MML
ngo00650 Butanoate metabolism SBML MML
ngo00660 C5-Branched dibasic acid metabolism SBML MML
ngo00670 One carbon pool by folate SBML MML
ngo00680 Methane metabolism SBML MML
ngo00710 (Undocumented) SBML MML
ngo00720 (Undocumented) SBML MML
ngo00730 Thiamine metabolism SBML MML
ngo00740 Riboflavin metabolism SBML MML
ngo00750 Vitamin B6 metabolism SBML MML
ngo00760 Nicotinate and nicotinamide metabolism SBML MML
ngo00770 Pantothenate and CoA biosynthesis SBML MML
ngo00780 Biotin metabolism SBML MML
ngo00785 Lipoic acid metabolism SBML MML
ngo00790 Folate biosynthesis SBML MML
ngo00860 Porphyrin and chlorophyll metabolism SBML MML
ngo00900 Terpenoid backbone biosynthesis SBML MML
ngo00910 Nitrogen metabolism SBML MML
ngo00920 Sulfur metabolism SBML MML
ngo00950 (Undocumented) SBML MML
ngo00970 Aminoacyl-tRNA biosynthesis SBML MML
ngo00982 (Undocumented) SBML MML
ngo00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.