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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism mtf: Mycobacterium tuberculosis F11

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
mtf00010 Glycolysis / Gluconeogenesis SBML MML
mtf00020 Citrate cycle (TCA cycle) SBML MML
mtf00030 Pentose phosphate pathway SBML MML
mtf00031 (Undocumented) SBML MML
mtf00040 Pentose and glucuronate interconversions SBML MML
mtf00051 Fructose and mannose metabolism SBML MML
mtf00052 Galactose metabolism SBML MML
mtf00053 Ascorbate and aldarate metabolism SBML MML
mtf00061 Fatty acid biosynthesis SBML MML
mtf00062 Fatty acid elongation in mitochondria SBML MML
mtf00071 Fatty acid metabolism SBML MML
mtf00072 Synthesis and degradation of ketone bodies SBML MML
mtf00100 (Undocumented) SBML MML
mtf00120 (Undocumented) SBML MML
mtf00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
mtf00140 (Undocumented) SBML MML
mtf00150 Androgen and estrogen metabolism SBML MML
mtf00220 (Undocumented) SBML MML
mtf00230 Purine metabolism SBML MML
mtf00240 Pyrimidine metabolism SBML MML
mtf00251 (Undocumented) SBML MML
mtf00252 (Undocumented) SBML MML
mtf00260 Glycine, serine and threonine metabolism SBML MML
mtf00271 (Undocumented) SBML MML
mtf00272 (Undocumented) SBML MML
mtf00280 Valine, leucine and isoleucine degradation SBML MML
mtf00281 Geraniol degradation SBML MML
mtf00290 Valine, leucine and isoleucine biosynthesis SBML MML
mtf00300 Lysine biosynthesis SBML MML
mtf00310 Lysine degradation SBML MML
mtf00311 Penicillin and cephalosporin biosynthesis SBML MML
mtf00330 Arginine and proline metabolism SBML MML
mtf00340 Histidine metabolism SBML MML
mtf00350 Tyrosine metabolism SBML MML
mtf00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
mtf00360 Phenylalanine metabolism SBML MML
mtf00361 gamma-Hexachlorocyclohexane degradation SBML MML
mtf00362 (Undocumented) SBML MML
mtf00363 Bisphenol A degradation SBML MML
mtf00364 Fluorobenzoate degradation SBML MML
mtf00380 Tryptophan metabolism SBML MML
mtf00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
mtf00401 Novobiocin biosynthesis SBML MML
mtf00410 beta-Alanine metabolism SBML MML
mtf00430 Taurine and hypotaurine metabolism SBML MML
mtf00450 Selenoamino acid metabolism SBML MML
mtf00460 (Undocumented) SBML MML
mtf00471 D-Glutamine and D-glutamate metabolism SBML MML
mtf00472 D-Arginine and D-ornithine metabolism SBML MML
mtf00473 D-Alanine metabolism SBML MML
mtf00480 Glutathione metabolism SBML MML
mtf00500 Starch and sucrose metabolism SBML MML
mtf00510 (Undocumented) SBML MML
mtf00520 Amino sugar and nucleotide sugar metabolism SBML MML
mtf00521 Streptomycin biosynthesis SBML MML
mtf00523 Polyketide sugar unit biosynthesis SBML MML
mtf00530 (Undocumented) SBML MML
mtf00550 Peptidoglycan biosynthesis SBML MML
mtf00561 Glycerolipid metabolism SBML MML
mtf00562 Inositol phosphate metabolism SBML MML
mtf00564 Glycerophospholipid metabolism SBML MML
mtf00565 Ether lipid metabolism SBML MML
mtf00590 Arachidonic acid metabolism SBML MML
mtf00591 Linoleic acid metabolism SBML MML
mtf00592 alpha-Linolenic acid metabolism SBML MML
mtf00620 Pyruvate metabolism SBML MML
mtf00621 (Undocumented) SBML MML
mtf00622 Toluene and xylene degradation SBML MML
mtf00624 1- and 2-Methylnaphthalene degradation SBML MML
mtf00625 (Undocumented) SBML MML
mtf00626 Naphthalene and anthracene degradation SBML MML
mtf00627 1,4-Dichlorobenzene degradation SBML MML
mtf00628 Fluorene degradation SBML MML
mtf00629 Carbazole degradation SBML MML
mtf00630 Glyoxylate and dicarboxylate metabolism SBML MML
mtf00631 1,2-Dichloroethane degradation SBML MML
mtf00632 (Undocumented) SBML MML
mtf00640 Propanoate metabolism SBML MML
mtf00641 3-Chloroacrylic acid degradation SBML MML
mtf00642 Ethylbenzene degradation SBML MML
mtf00643 Styrene degradation SBML MML
mtf00650 Butanoate metabolism SBML MML
mtf00660 C5-Branched dibasic acid metabolism SBML MML
mtf00670 One carbon pool by folate SBML MML
mtf00680 Methane metabolism SBML MML
mtf00710 (Undocumented) SBML MML
mtf00720 (Undocumented) SBML MML
mtf00730 Thiamine metabolism SBML MML
mtf00740 Riboflavin metabolism SBML MML
mtf00750 Vitamin B6 metabolism SBML MML
mtf00760 Nicotinate and nicotinamide metabolism SBML MML
mtf00770 Pantothenate and CoA biosynthesis SBML MML
mtf00780 Biotin metabolism SBML MML
mtf00790 Folate biosynthesis SBML MML
mtf00791 Atrazine degradation SBML MML
mtf00860 Porphyrin and chlorophyll metabolism SBML MML
mtf00900 Terpenoid backbone biosynthesis SBML MML
mtf00903 (Undocumented) SBML MML
mtf00910 Nitrogen metabolism SBML MML
mtf00920 Sulfur metabolism SBML MML
mtf00930 Caprolactam degradation SBML MML
mtf00940 (Undocumented) SBML MML
mtf00941 (Undocumented) SBML MML
mtf00960 (Undocumented) SBML MML
mtf00970 Aminoacyl-tRNA biosynthesis SBML MML
mtf00982 (Undocumented) SBML MML
mtf00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.