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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism mtc: Mycobacterium tuberculosis CDC1551

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
mtc00010 Glycolysis / Gluconeogenesis SBML MML
mtc00020 Citrate cycle (TCA cycle) SBML MML
mtc00030 Pentose phosphate pathway SBML MML
mtc00031 (Undocumented) SBML MML
mtc00040 Pentose and glucuronate interconversions SBML MML
mtc00051 Fructose and mannose metabolism SBML MML
mtc00052 Galactose metabolism SBML MML
mtc00053 Ascorbate and aldarate metabolism SBML MML
mtc00061 Fatty acid biosynthesis SBML MML
mtc00062 Fatty acid elongation in mitochondria SBML MML
mtc00071 Fatty acid metabolism SBML MML
mtc00072 Synthesis and degradation of ketone bodies SBML MML
mtc00100 (Undocumented) SBML MML
mtc00120 (Undocumented) SBML MML
mtc00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
mtc00150 Androgen and estrogen metabolism SBML MML
mtc00220 (Undocumented) SBML MML
mtc00230 Purine metabolism SBML MML
mtc00240 Pyrimidine metabolism SBML MML
mtc00251 (Undocumented) SBML MML
mtc00252 (Undocumented) SBML MML
mtc00260 Glycine, serine and threonine metabolism SBML MML
mtc00271 (Undocumented) SBML MML
mtc00272 (Undocumented) SBML MML
mtc00280 Valine, leucine and isoleucine degradation SBML MML
mtc00281 Geraniol degradation SBML MML
mtc00290 Valine, leucine and isoleucine biosynthesis SBML MML
mtc00300 Lysine biosynthesis SBML MML
mtc00310 Lysine degradation SBML MML
mtc00311 Penicillin and cephalosporin biosynthesis SBML MML
mtc00330 Arginine and proline metabolism SBML MML
mtc00340 Histidine metabolism SBML MML
mtc00350 Tyrosine metabolism SBML MML
mtc00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
mtc00360 Phenylalanine metabolism SBML MML
mtc00361 gamma-Hexachlorocyclohexane degradation SBML MML
mtc00362 (Undocumented) SBML MML
mtc00363 Bisphenol A degradation SBML MML
mtc00364 Fluorobenzoate degradation SBML MML
mtc00380 Tryptophan metabolism SBML MML
mtc00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
mtc00401 Novobiocin biosynthesis SBML MML
mtc00410 beta-Alanine metabolism SBML MML
mtc00430 Taurine and hypotaurine metabolism SBML MML
mtc00450 Selenoamino acid metabolism SBML MML
mtc00460 (Undocumented) SBML MML
mtc00471 D-Glutamine and D-glutamate metabolism SBML MML
mtc00472 D-Arginine and D-ornithine metabolism SBML MML
mtc00473 D-Alanine metabolism SBML MML
mtc00480 Glutathione metabolism SBML MML
mtc00500 Starch and sucrose metabolism SBML MML
mtc00510 (Undocumented) SBML MML
mtc00520 Amino sugar and nucleotide sugar metabolism SBML MML
mtc00521 Streptomycin biosynthesis SBML MML
mtc00523 Polyketide sugar unit biosynthesis SBML MML
mtc00530 (Undocumented) SBML MML
mtc00550 Peptidoglycan biosynthesis SBML MML
mtc00561 Glycerolipid metabolism SBML MML
mtc00562 Inositol phosphate metabolism SBML MML
mtc00564 Glycerophospholipid metabolism SBML MML
mtc00565 Ether lipid metabolism SBML MML
mtc00590 Arachidonic acid metabolism SBML MML
mtc00591 Linoleic acid metabolism SBML MML
mtc00592 alpha-Linolenic acid metabolism SBML MML
mtc00620 Pyruvate metabolism SBML MML
mtc00621 (Undocumented) SBML MML
mtc00622 Toluene and xylene degradation SBML MML
mtc00624 1- and 2-Methylnaphthalene degradation SBML MML
mtc00625 (Undocumented) SBML MML
mtc00626 Naphthalene and anthracene degradation SBML MML
mtc00627 1,4-Dichlorobenzene degradation SBML MML
mtc00628 Fluorene degradation SBML MML
mtc00629 Carbazole degradation SBML MML
mtc00630 Glyoxylate and dicarboxylate metabolism SBML MML
mtc00631 1,2-Dichloroethane degradation SBML MML
mtc00632 (Undocumented) SBML MML
mtc00640 Propanoate metabolism SBML MML
mtc00641 3-Chloroacrylic acid degradation SBML MML
mtc00642 Ethylbenzene degradation SBML MML
mtc00643 Styrene degradation SBML MML
mtc00650 Butanoate metabolism SBML MML
mtc00660 C5-Branched dibasic acid metabolism SBML MML
mtc00670 One carbon pool by folate SBML MML
mtc00680 Methane metabolism SBML MML
mtc00710 (Undocumented) SBML MML
mtc00720 (Undocumented) SBML MML
mtc00730 Thiamine metabolism SBML MML
mtc00740 Riboflavin metabolism SBML MML
mtc00750 Vitamin B6 metabolism SBML MML
mtc00760 Nicotinate and nicotinamide metabolism SBML MML
mtc00770 Pantothenate and CoA biosynthesis SBML MML
mtc00780 Biotin metabolism SBML MML
mtc00785 Lipoic acid metabolism SBML MML
mtc00790 Folate biosynthesis SBML MML
mtc00860 Porphyrin and chlorophyll metabolism SBML MML
mtc00900 Terpenoid backbone biosynthesis SBML MML
mtc00903 (Undocumented) SBML MML
mtc00910 Nitrogen metabolism SBML MML
mtc00920 Sulfur metabolism SBML MML
mtc00930 Caprolactam degradation SBML MML
mtc00940 (Undocumented) SBML MML
mtc00941 (Undocumented) SBML MML
mtc00960 (Undocumented) SBML MML
mtc00970 Aminoacyl-tRNA biosynthesis SBML MML
mtc00982 (Undocumented) SBML MML
mtc00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.