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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism msy: Mycoplasma synoviae

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
msy00010 Glycolysis / Gluconeogenesis SBML MML
msy00020 Citrate cycle (TCA cycle) SBML MML
msy00030 Pentose phosphate pathway SBML MML
msy00051 Fructose and mannose metabolism SBML MML
msy00053 Ascorbate and aldarate metabolism SBML MML
msy00230 Purine metabolism SBML MML
msy00240 Pyrimidine metabolism SBML MML
msy00251 (Undocumented) SBML MML
msy00252 (Undocumented) SBML MML
msy00260 Glycine, serine and threonine metabolism SBML MML
msy00271 (Undocumented) SBML MML
msy00272 (Undocumented) SBML MML
msy00280 Valine, leucine and isoleucine degradation SBML MML
msy00290 Valine, leucine and isoleucine biosynthesis SBML MML
msy00330 Arginine and proline metabolism SBML MML
msy00340 Histidine metabolism SBML MML
msy00380 Tryptophan metabolism SBML MML
msy00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
msy00430 Taurine and hypotaurine metabolism SBML MML
msy00450 Selenoamino acid metabolism SBML MML
msy00460 (Undocumented) SBML MML
msy00500 Starch and sucrose metabolism SBML MML
msy00530 (Undocumented) SBML MML
msy00561 Glycerolipid metabolism SBML MML
msy00564 Glycerophospholipid metabolism SBML MML
msy00620 Pyruvate metabolism SBML MML
msy00640 Propanoate metabolism SBML MML
msy00670 One carbon pool by folate SBML MML
msy00710 (Undocumented) SBML MML
msy00740 Riboflavin metabolism SBML MML
msy00760 Nicotinate and nicotinamide metabolism SBML MML
msy00770 Pantothenate and CoA biosynthesis SBML MML
msy00785 Lipoic acid metabolism SBML MML
msy00790 Folate biosynthesis SBML MML
msy00970 Aminoacyl-tRNA biosynthesis SBML MML
msy00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.