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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism mpt: Methylibium petroleiphilum

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
mpt00010 Glycolysis / Gluconeogenesis SBML MML
mpt00020 Citrate cycle (TCA cycle) SBML MML
mpt00030 Pentose phosphate pathway SBML MML
mpt00031 (Undocumented) SBML MML
mpt00040 Pentose and glucuronate interconversions SBML MML
mpt00051 Fructose and mannose metabolism SBML MML
mpt00052 Galactose metabolism SBML MML
mpt00053 Ascorbate and aldarate metabolism SBML MML
mpt00061 Fatty acid biosynthesis SBML MML
mpt00062 Fatty acid elongation in mitochondria SBML MML
mpt00071 Fatty acid metabolism SBML MML
mpt00072 Synthesis and degradation of ketone bodies SBML MML
mpt00100 (Undocumented) SBML MML
mpt00120 (Undocumented) SBML MML
mpt00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
mpt00150 Androgen and estrogen metabolism SBML MML
mpt00220 (Undocumented) SBML MML
mpt00230 Purine metabolism SBML MML
mpt00240 Pyrimidine metabolism SBML MML
mpt00251 (Undocumented) SBML MML
mpt00252 (Undocumented) SBML MML
mpt00260 Glycine, serine and threonine metabolism SBML MML
mpt00271 (Undocumented) SBML MML
mpt00272 (Undocumented) SBML MML
mpt00280 Valine, leucine and isoleucine degradation SBML MML
mpt00281 Geraniol degradation SBML MML
mpt00290 Valine, leucine and isoleucine biosynthesis SBML MML
mpt00300 Lysine biosynthesis SBML MML
mpt00310 Lysine degradation SBML MML
mpt00330 Arginine and proline metabolism SBML MML
mpt00340 Histidine metabolism SBML MML
mpt00350 Tyrosine metabolism SBML MML
mpt00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
mpt00360 Phenylalanine metabolism SBML MML
mpt00361 gamma-Hexachlorocyclohexane degradation SBML MML
mpt00362 (Undocumented) SBML MML
mpt00363 Bisphenol A degradation SBML MML
mpt00364 Fluorobenzoate degradation SBML MML
mpt00380 Tryptophan metabolism SBML MML
mpt00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
mpt00401 Novobiocin biosynthesis SBML MML
mpt00410 beta-Alanine metabolism SBML MML
mpt00440 Phosphonate and phosphinate metabolism SBML MML
mpt00450 Selenoamino acid metabolism SBML MML
mpt00460 (Undocumented) SBML MML
mpt00471 D-Glutamine and D-glutamate metabolism SBML MML
mpt00472 D-Arginine and D-ornithine metabolism SBML MML
mpt00473 D-Alanine metabolism SBML MML
mpt00480 Glutathione metabolism SBML MML
mpt00500 Starch and sucrose metabolism SBML MML
mpt00510 (Undocumented) SBML MML
mpt00520 Amino sugar and nucleotide sugar metabolism SBML MML
mpt00521 Streptomycin biosynthesis SBML MML
mpt00523 Polyketide sugar unit biosynthesis SBML MML
mpt00530 (Undocumented) SBML MML
mpt00540 Lipopolysaccharide biosynthesis SBML MML
mpt00550 Peptidoglycan biosynthesis SBML MML
mpt00561 Glycerolipid metabolism SBML MML
mpt00562 Inositol phosphate metabolism SBML MML
mpt00564 Glycerophospholipid metabolism SBML MML
mpt00590 Arachidonic acid metabolism SBML MML
mpt00592 alpha-Linolenic acid metabolism SBML MML
mpt00620 Pyruvate metabolism SBML MML
mpt00621 (Undocumented) SBML MML
mpt00622 Toluene and xylene degradation SBML MML
mpt00624 1- and 2-Methylnaphthalene degradation SBML MML
mpt00625 (Undocumented) SBML MML
mpt00626 Naphthalene and anthracene degradation SBML MML
mpt00627 1,4-Dichlorobenzene degradation SBML MML
mpt00628 Fluorene degradation SBML MML
mpt00629 Carbazole degradation SBML MML
mpt00630 Glyoxylate and dicarboxylate metabolism SBML MML
mpt00631 1,2-Dichloroethane degradation SBML MML
mpt00632 (Undocumented) SBML MML
mpt00633 Trinitrotoluene degradation SBML MML
mpt00640 Propanoate metabolism SBML MML
mpt00641 3-Chloroacrylic acid degradation SBML MML
mpt00642 Ethylbenzene degradation SBML MML
mpt00643 Styrene degradation SBML MML
mpt00650 Butanoate metabolism SBML MML
mpt00660 C5-Branched dibasic acid metabolism SBML MML
mpt00670 One carbon pool by folate SBML MML
mpt00680 Methane metabolism SBML MML
mpt00710 (Undocumented) SBML MML
mpt00720 (Undocumented) SBML MML
mpt00730 Thiamine metabolism SBML MML
mpt00740 Riboflavin metabolism SBML MML
mpt00750 Vitamin B6 metabolism SBML MML
mpt00760 Nicotinate and nicotinamide metabolism SBML MML
mpt00770 Pantothenate and CoA biosynthesis SBML MML
mpt00780 Biotin metabolism SBML MML
mpt00785 Lipoic acid metabolism SBML MML
mpt00790 Folate biosynthesis SBML MML
mpt00791 Atrazine degradation SBML MML
mpt00860 Porphyrin and chlorophyll metabolism SBML MML
mpt00900 Terpenoid backbone biosynthesis SBML MML
mpt00903 (Undocumented) SBML MML
mpt00910 Nitrogen metabolism SBML MML
mpt00920 Sulfur metabolism SBML MML
mpt00930 Caprolactam degradation SBML MML
mpt00940 (Undocumented) SBML MML
mpt00950 (Undocumented) SBML MML
mpt00970 Aminoacyl-tRNA biosynthesis SBML MML
mpt00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
mpt00982 (Undocumented) SBML MML
mpt00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.