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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism mpa: Mycobacterium avium paratuberculosis

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
mpa00010 Glycolysis / Gluconeogenesis SBML MML
mpa00020 Citrate cycle (TCA cycle) SBML MML
mpa00030 Pentose phosphate pathway SBML MML
mpa00031 (Undocumented) SBML MML
mpa00040 Pentose and glucuronate interconversions SBML MML
mpa00051 Fructose and mannose metabolism SBML MML
mpa00052 Galactose metabolism SBML MML
mpa00053 Ascorbate and aldarate metabolism SBML MML
mpa00061 Fatty acid biosynthesis SBML MML
mpa00062 Fatty acid elongation in mitochondria SBML MML
mpa00071 Fatty acid metabolism SBML MML
mpa00072 Synthesis and degradation of ketone bodies SBML MML
mpa00100 (Undocumented) SBML MML
mpa00120 (Undocumented) SBML MML
mpa00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
mpa00140 (Undocumented) SBML MML
mpa00150 Androgen and estrogen metabolism SBML MML
mpa00220 (Undocumented) SBML MML
mpa00230 Purine metabolism SBML MML
mpa00240 Pyrimidine metabolism SBML MML
mpa00251 (Undocumented) SBML MML
mpa00252 (Undocumented) SBML MML
mpa00260 Glycine, serine and threonine metabolism SBML MML
mpa00271 (Undocumented) SBML MML
mpa00272 (Undocumented) SBML MML
mpa00280 Valine, leucine and isoleucine degradation SBML MML
mpa00281 Geraniol degradation SBML MML
mpa00290 Valine, leucine and isoleucine biosynthesis SBML MML
mpa00300 Lysine biosynthesis SBML MML
mpa00310 Lysine degradation SBML MML
mpa00330 Arginine and proline metabolism SBML MML
mpa00340 Histidine metabolism SBML MML
mpa00350 Tyrosine metabolism SBML MML
mpa00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
mpa00360 Phenylalanine metabolism SBML MML
mpa00361 gamma-Hexachlorocyclohexane degradation SBML MML
mpa00362 (Undocumented) SBML MML
mpa00364 Fluorobenzoate degradation SBML MML
mpa00380 Tryptophan metabolism SBML MML
mpa00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
mpa00401 Novobiocin biosynthesis SBML MML
mpa00410 beta-Alanine metabolism SBML MML
mpa00430 Taurine and hypotaurine metabolism SBML MML
mpa00450 Selenoamino acid metabolism SBML MML
mpa00460 (Undocumented) SBML MML
mpa00471 D-Glutamine and D-glutamate metabolism SBML MML
mpa00473 D-Alanine metabolism SBML MML
mpa00480 Glutathione metabolism SBML MML
mpa00500 Starch and sucrose metabolism SBML MML
mpa00510 (Undocumented) SBML MML
mpa00520 Amino sugar and nucleotide sugar metabolism SBML MML
mpa00521 Streptomycin biosynthesis SBML MML
mpa00523 Polyketide sugar unit biosynthesis SBML MML
mpa00530 (Undocumented) SBML MML
mpa00540 Lipopolysaccharide biosynthesis SBML MML
mpa00550 Peptidoglycan biosynthesis SBML MML
mpa00561 Glycerolipid metabolism SBML MML
mpa00562 Inositol phosphate metabolism SBML MML
mpa00564 Glycerophospholipid metabolism SBML MML
mpa00565 Ether lipid metabolism SBML MML
mpa00591 Linoleic acid metabolism SBML MML
mpa00592 alpha-Linolenic acid metabolism SBML MML
mpa00620 Pyruvate metabolism SBML MML
mpa00621 (Undocumented) SBML MML
mpa00622 Toluene and xylene degradation SBML MML
mpa00623 2,4-Dichlorobenzoate degradation SBML MML
mpa00624 1- and 2-Methylnaphthalene degradation SBML MML
mpa00626 Naphthalene and anthracene degradation SBML MML
mpa00627 1,4-Dichlorobenzene degradation SBML MML
mpa00628 Fluorene degradation SBML MML
mpa00629 Carbazole degradation SBML MML
mpa00630 Glyoxylate and dicarboxylate metabolism SBML MML
mpa00631 1,2-Dichloroethane degradation SBML MML
mpa00632 (Undocumented) SBML MML
mpa00640 Propanoate metabolism SBML MML
mpa00641 3-Chloroacrylic acid degradation SBML MML
mpa00642 Ethylbenzene degradation SBML MML
mpa00643 Styrene degradation SBML MML
mpa00650 Butanoate metabolism SBML MML
mpa00660 C5-Branched dibasic acid metabolism SBML MML
mpa00670 One carbon pool by folate SBML MML
mpa00680 Methane metabolism SBML MML
mpa00710 (Undocumented) SBML MML
mpa00720 (Undocumented) SBML MML
mpa00730 Thiamine metabolism SBML MML
mpa00740 Riboflavin metabolism SBML MML
mpa00750 Vitamin B6 metabolism SBML MML
mpa00760 Nicotinate and nicotinamide metabolism SBML MML
mpa00770 Pantothenate and CoA biosynthesis SBML MML
mpa00780 Biotin metabolism SBML MML
mpa00785 Lipoic acid metabolism SBML MML
mpa00790 Folate biosynthesis SBML MML
mpa00860 Porphyrin and chlorophyll metabolism SBML MML
mpa00900 Terpenoid backbone biosynthesis SBML MML
mpa00903 (Undocumented) SBML MML
mpa00906 Carotenoid biosynthesis SBML MML
mpa00910 Nitrogen metabolism SBML MML
mpa00920 Sulfur metabolism SBML MML
mpa00930 Caprolactam degradation SBML MML
mpa00940 (Undocumented) SBML MML
mpa00941 (Undocumented) SBML MML
mpa00960 (Undocumented) SBML MML
mpa00970 Aminoacyl-tRNA biosynthesis SBML MML
mpa00982 (Undocumented) SBML MML
mpa00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.