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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism mlo: Mesorhizobium loti

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
mlo00010 Glycolysis / Gluconeogenesis SBML MML
mlo00020 Citrate cycle (TCA cycle) SBML MML
mlo00030 Pentose phosphate pathway SBML MML
mlo00031 (Undocumented) SBML MML
mlo00040 Pentose and glucuronate interconversions SBML MML
mlo00051 Fructose and mannose metabolism SBML MML
mlo00052 Galactose metabolism SBML MML
mlo00053 Ascorbate and aldarate metabolism SBML MML
mlo00061 Fatty acid biosynthesis SBML MML
mlo00062 Fatty acid elongation in mitochondria SBML MML
mlo00071 Fatty acid metabolism SBML MML
mlo00072 Synthesis and degradation of ketone bodies SBML MML
mlo00100 (Undocumented) SBML MML
mlo00120 (Undocumented) SBML MML
mlo00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
mlo00140 (Undocumented) SBML MML
mlo00150 Androgen and estrogen metabolism SBML MML
mlo00220 (Undocumented) SBML MML
mlo00230 Purine metabolism SBML MML
mlo00240 Pyrimidine metabolism SBML MML
mlo00251 (Undocumented) SBML MML
mlo00252 (Undocumented) SBML MML
mlo00260 Glycine, serine and threonine metabolism SBML MML
mlo00271 (Undocumented) SBML MML
mlo00272 (Undocumented) SBML MML
mlo00280 Valine, leucine and isoleucine degradation SBML MML
mlo00281 Geraniol degradation SBML MML
mlo00290 Valine, leucine and isoleucine biosynthesis SBML MML
mlo00300 Lysine biosynthesis SBML MML
mlo00310 Lysine degradation SBML MML
mlo00311 Penicillin and cephalosporin biosynthesis SBML MML
mlo00330 Arginine and proline metabolism SBML MML
mlo00340 Histidine metabolism SBML MML
mlo00350 Tyrosine metabolism SBML MML
mlo00360 Phenylalanine metabolism SBML MML
mlo00361 gamma-Hexachlorocyclohexane degradation SBML MML
mlo00362 (Undocumented) SBML MML
mlo00363 Bisphenol A degradation SBML MML
mlo00364 Fluorobenzoate degradation SBML MML
mlo00380 Tryptophan metabolism SBML MML
mlo00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
mlo00401 Novobiocin biosynthesis SBML MML
mlo00410 beta-Alanine metabolism SBML MML
mlo00430 Taurine and hypotaurine metabolism SBML MML
mlo00440 Phosphonate and phosphinate metabolism SBML MML
mlo00450 Selenoamino acid metabolism SBML MML
mlo00460 (Undocumented) SBML MML
mlo00471 D-Glutamine and D-glutamate metabolism SBML MML
mlo00472 D-Arginine and D-ornithine metabolism SBML MML
mlo00473 D-Alanine metabolism SBML MML
mlo00480 Glutathione metabolism SBML MML
mlo00500 Starch and sucrose metabolism SBML MML
mlo00520 Amino sugar and nucleotide sugar metabolism SBML MML
mlo00521 Streptomycin biosynthesis SBML MML
mlo00523 Polyketide sugar unit biosynthesis SBML MML
mlo00530 (Undocumented) SBML MML
mlo00540 Lipopolysaccharide biosynthesis SBML MML
mlo00550 Peptidoglycan biosynthesis SBML MML
mlo00561 Glycerolipid metabolism SBML MML
mlo00562 Inositol phosphate metabolism SBML MML
mlo00564 Glycerophospholipid metabolism SBML MML
mlo00592 alpha-Linolenic acid metabolism SBML MML
mlo00600 Sphingolipid metabolism SBML MML
mlo00620 Pyruvate metabolism SBML MML
mlo00622 Toluene and xylene degradation SBML MML
mlo00623 2,4-Dichlorobenzoate degradation SBML MML
mlo00624 1- and 2-Methylnaphthalene degradation SBML MML
mlo00625 (Undocumented) SBML MML
mlo00626 Naphthalene and anthracene degradation SBML MML
mlo00627 1,4-Dichlorobenzene degradation SBML MML
mlo00628 Fluorene degradation SBML MML
mlo00630 Glyoxylate and dicarboxylate metabolism SBML MML
mlo00631 1,2-Dichloroethane degradation SBML MML
mlo00632 (Undocumented) SBML MML
mlo00633 Trinitrotoluene degradation SBML MML
mlo00640 Propanoate metabolism SBML MML
mlo00641 3-Chloroacrylic acid degradation SBML MML
mlo00642 Ethylbenzene degradation SBML MML
mlo00643 Styrene degradation SBML MML
mlo00650 Butanoate metabolism SBML MML
mlo00660 C5-Branched dibasic acid metabolism SBML MML
mlo00670 One carbon pool by folate SBML MML
mlo00680 Methane metabolism SBML MML
mlo00710 (Undocumented) SBML MML
mlo00720 (Undocumented) SBML MML
mlo00730 Thiamine metabolism SBML MML
mlo00740 Riboflavin metabolism SBML MML
mlo00750 Vitamin B6 metabolism SBML MML
mlo00760 Nicotinate and nicotinamide metabolism SBML MML
mlo00770 Pantothenate and CoA biosynthesis SBML MML
mlo00780 Biotin metabolism SBML MML
mlo00785 Lipoic acid metabolism SBML MML
mlo00790 Folate biosynthesis SBML MML
mlo00860 Porphyrin and chlorophyll metabolism SBML MML
mlo00900 Terpenoid backbone biosynthesis SBML MML
mlo00903 (Undocumented) SBML MML
mlo00910 Nitrogen metabolism SBML MML
mlo00920 Sulfur metabolism SBML MML
mlo00930 Caprolactam degradation SBML MML
mlo00940 (Undocumented) SBML MML
mlo00950 (Undocumented) SBML MML
mlo00960 (Undocumented) SBML MML
mlo00970 Aminoacyl-tRNA biosynthesis SBML MML
mlo00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
mlo00982 (Undocumented) SBML MML
mlo00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.