This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism mjl: Mycobacterium sp. JLS

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
mjl00010 Glycolysis / Gluconeogenesis SBML MML
mjl00020 Citrate cycle (TCA cycle) SBML MML
mjl00030 Pentose phosphate pathway SBML MML
mjl00031 (Undocumented) SBML MML
mjl00040 Pentose and glucuronate interconversions SBML MML
mjl00051 Fructose and mannose metabolism SBML MML
mjl00052 Galactose metabolism SBML MML
mjl00053 Ascorbate and aldarate metabolism SBML MML
mjl00061 Fatty acid biosynthesis SBML MML
mjl00062 Fatty acid elongation in mitochondria SBML MML
mjl00071 Fatty acid metabolism SBML MML
mjl00072 Synthesis and degradation of ketone bodies SBML MML
mjl00100 (Undocumented) SBML MML
mjl00120 (Undocumented) SBML MML
mjl00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
mjl00140 (Undocumented) SBML MML
mjl00150 Androgen and estrogen metabolism SBML MML
mjl00220 (Undocumented) SBML MML
mjl00230 Purine metabolism SBML MML
mjl00240 Pyrimidine metabolism SBML MML
mjl00251 (Undocumented) SBML MML
mjl00252 (Undocumented) SBML MML
mjl00260 Glycine, serine and threonine metabolism SBML MML
mjl00271 (Undocumented) SBML MML
mjl00272 (Undocumented) SBML MML
mjl00280 Valine, leucine and isoleucine degradation SBML MML
mjl00281 Geraniol degradation SBML MML
mjl00290 Valine, leucine and isoleucine biosynthesis SBML MML
mjl00300 Lysine biosynthesis SBML MML
mjl00310 Lysine degradation SBML MML
mjl00330 Arginine and proline metabolism SBML MML
mjl00340 Histidine metabolism SBML MML
mjl00350 Tyrosine metabolism SBML MML
mjl00360 Phenylalanine metabolism SBML MML
mjl00361 gamma-Hexachlorocyclohexane degradation SBML MML
mjl00362 (Undocumented) SBML MML
mjl00364 Fluorobenzoate degradation SBML MML
mjl00380 Tryptophan metabolism SBML MML
mjl00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
mjl00401 Novobiocin biosynthesis SBML MML
mjl00410 beta-Alanine metabolism SBML MML
mjl00430 Taurine and hypotaurine metabolism SBML MML
mjl00450 Selenoamino acid metabolism SBML MML
mjl00460 (Undocumented) SBML MML
mjl00471 D-Glutamine and D-glutamate metabolism SBML MML
mjl00473 D-Alanine metabolism SBML MML
mjl00480 Glutathione metabolism SBML MML
mjl00500 Starch and sucrose metabolism SBML MML
mjl00510 (Undocumented) SBML MML
mjl00520 Amino sugar and nucleotide sugar metabolism SBML MML
mjl00521 Streptomycin biosynthesis SBML MML
mjl00523 Polyketide sugar unit biosynthesis SBML MML
mjl00530 (Undocumented) SBML MML
mjl00550 Peptidoglycan biosynthesis SBML MML
mjl00561 Glycerolipid metabolism SBML MML
mjl00562 Inositol phosphate metabolism SBML MML
mjl00564 Glycerophospholipid metabolism SBML MML
mjl00565 Ether lipid metabolism SBML MML
mjl00590 Arachidonic acid metabolism SBML MML
mjl00592 alpha-Linolenic acid metabolism SBML MML
mjl00620 Pyruvate metabolism SBML MML
mjl00622 Toluene and xylene degradation SBML MML
mjl00623 2,4-Dichlorobenzoate degradation SBML MML
mjl00624 1- and 2-Methylnaphthalene degradation SBML MML
mjl00626 Naphthalene and anthracene degradation SBML MML
mjl00627 1,4-Dichlorobenzene degradation SBML MML
mjl00628 Fluorene degradation SBML MML
mjl00629 Carbazole degradation SBML MML
mjl00630 Glyoxylate and dicarboxylate metabolism SBML MML
mjl00631 1,2-Dichloroethane degradation SBML MML
mjl00632 (Undocumented) SBML MML
mjl00633 Trinitrotoluene degradation SBML MML
mjl00640 Propanoate metabolism SBML MML
mjl00641 3-Chloroacrylic acid degradation SBML MML
mjl00642 Ethylbenzene degradation SBML MML
mjl00643 Styrene degradation SBML MML
mjl00650 Butanoate metabolism SBML MML
mjl00660 C5-Branched dibasic acid metabolism SBML MML
mjl00670 One carbon pool by folate SBML MML
mjl00680 Methane metabolism SBML MML
mjl00710 (Undocumented) SBML MML
mjl00720 (Undocumented) SBML MML
mjl00730 Thiamine metabolism SBML MML
mjl00740 Riboflavin metabolism SBML MML
mjl00750 Vitamin B6 metabolism SBML MML
mjl00760 Nicotinate and nicotinamide metabolism SBML MML
mjl00770 Pantothenate and CoA biosynthesis SBML MML
mjl00780 Biotin metabolism SBML MML
mjl00785 Lipoic acid metabolism SBML MML
mjl00790 Folate biosynthesis SBML MML
mjl00791 Atrazine degradation SBML MML
mjl00860 Porphyrin and chlorophyll metabolism SBML MML
mjl00900 Terpenoid backbone biosynthesis SBML MML
mjl00903 (Undocumented) SBML MML
mjl00904 (Undocumented) SBML MML
mjl00910 Nitrogen metabolism SBML MML
mjl00920 Sulfur metabolism SBML MML
mjl00930 Caprolactam degradation SBML MML
mjl00941 (Undocumented) SBML MML
mjl00960 (Undocumented) SBML MML
mjl00970 Aminoacyl-tRNA biosynthesis SBML MML
mjl00982 (Undocumented) SBML MML
mjl00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.