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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism mge: Mycoplasma genitalium

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
mge00010 Glycolysis / Gluconeogenesis SBML MML
mge00030 Pentose phosphate pathway SBML MML
mge00040 Pentose and glucuronate interconversions SBML MML
mge00051 Fructose and mannose metabolism SBML MML
mge00052 Galactose metabolism SBML MML
mge00230 Purine metabolism SBML MML
mge00240 Pyrimidine metabolism SBML MML
mge00251 (Undocumented) SBML MML
mge00252 (Undocumented) SBML MML
mge00260 Glycine, serine and threonine metabolism SBML MML
mge00271 (Undocumented) SBML MML
mge00272 (Undocumented) SBML MML
mge00280 Valine, leucine and isoleucine degradation SBML MML
mge00281 Geraniol degradation SBML MML
mge00290 Valine, leucine and isoleucine biosynthesis SBML MML
mge00330 Arginine and proline metabolism SBML MML
mge00380 Tryptophan metabolism SBML MML
mge00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
mge00430 Taurine and hypotaurine metabolism SBML MML
mge00450 Selenoamino acid metabolism SBML MML
mge00500 Starch and sucrose metabolism SBML MML
mge00520 Amino sugar and nucleotide sugar metabolism SBML MML
mge00561 Glycerolipid metabolism SBML MML
mge00564 Glycerophospholipid metabolism SBML MML
mge00620 Pyruvate metabolism SBML MML
mge00624 1- and 2-Methylnaphthalene degradation SBML MML
mge00626 Naphthalene and anthracene degradation SBML MML
mge00630 Glyoxylate and dicarboxylate metabolism SBML MML
mge00640 Propanoate metabolism SBML MML
mge00670 One carbon pool by folate SBML MML
mge00710 (Undocumented) SBML MML
mge00730 Thiamine metabolism SBML MML
mge00740 Riboflavin metabolism SBML MML
mge00760 Nicotinate and nicotinamide metabolism SBML MML
mge00770 Pantothenate and CoA biosynthesis SBML MML
mge00785 Lipoic acid metabolism SBML MML
mge00790 Folate biosynthesis SBML MML
mge00970 Aminoacyl-tRNA biosynthesis SBML MML
mge00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.