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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism mdo: Monodelphis domestica (opossum)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
mdo00010 Glycolysis / Gluconeogenesis SBML MML
mdo00020 Citrate cycle (TCA cycle) SBML MML
mdo00030 Pentose phosphate pathway SBML MML
mdo00031 (Undocumented) SBML MML
mdo00040 Pentose and glucuronate interconversions SBML MML
mdo00051 Fructose and mannose metabolism SBML MML
mdo00052 Galactose metabolism SBML MML
mdo00053 Ascorbate and aldarate metabolism SBML MML
mdo00061 Fatty acid biosynthesis SBML MML
mdo00062 Fatty acid elongation in mitochondria SBML MML
mdo00071 Fatty acid metabolism SBML MML
mdo00072 Synthesis and degradation of ketone bodies SBML MML
mdo00100 (Undocumented) SBML MML
mdo00120 (Undocumented) SBML MML
mdo00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
mdo00140 (Undocumented) SBML MML
mdo00150 Androgen and estrogen metabolism SBML MML
mdo00220 (Undocumented) SBML MML
mdo00230 Purine metabolism SBML MML
mdo00232 Caffeine metabolism SBML MML
mdo00240 Pyrimidine metabolism SBML MML
mdo00251 (Undocumented) SBML MML
mdo00252 (Undocumented) SBML MML
mdo00260 Glycine, serine and threonine metabolism SBML MML
mdo00271 (Undocumented) SBML MML
mdo00272 (Undocumented) SBML MML
mdo00280 Valine, leucine and isoleucine degradation SBML MML
mdo00281 Geraniol degradation SBML MML
mdo00290 Valine, leucine and isoleucine biosynthesis SBML MML
mdo00300 Lysine biosynthesis SBML MML
mdo00310 Lysine degradation SBML MML
mdo00330 Arginine and proline metabolism SBML MML
mdo00340 Histidine metabolism SBML MML
mdo00350 Tyrosine metabolism SBML MML
mdo00360 Phenylalanine metabolism SBML MML
mdo00361 gamma-Hexachlorocyclohexane degradation SBML MML
mdo00363 Bisphenol A degradation SBML MML
mdo00380 Tryptophan metabolism SBML MML
mdo00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
mdo00401 Novobiocin biosynthesis SBML MML
mdo00410 beta-Alanine metabolism SBML MML
mdo00430 Taurine and hypotaurine metabolism SBML MML
mdo00440 Phosphonate and phosphinate metabolism SBML MML
mdo00450 Selenoamino acid metabolism SBML MML
mdo00460 (Undocumented) SBML MML
mdo00471 D-Glutamine and D-glutamate metabolism SBML MML
mdo00472 D-Arginine and D-ornithine metabolism SBML MML
mdo00480 Glutathione metabolism SBML MML
mdo00500 Starch and sucrose metabolism SBML MML
mdo00510 (Undocumented) SBML MML
mdo00520 Amino sugar and nucleotide sugar metabolism SBML MML
mdo00521 Streptomycin biosynthesis SBML MML
mdo00530 (Undocumented) SBML MML
mdo00550 Peptidoglycan biosynthesis SBML MML
mdo00561 Glycerolipid metabolism SBML MML
mdo00562 Inositol phosphate metabolism SBML MML
mdo00564 Glycerophospholipid metabolism SBML MML
mdo00565 Ether lipid metabolism SBML MML
mdo00590 Arachidonic acid metabolism SBML MML
mdo00591 Linoleic acid metabolism SBML MML
mdo00592 alpha-Linolenic acid metabolism SBML MML
mdo00600 Sphingolipid metabolism SBML MML
mdo00620 Pyruvate metabolism SBML MML
mdo00624 1- and 2-Methylnaphthalene degradation SBML MML
mdo00625 (Undocumented) SBML MML
mdo00626 Naphthalene and anthracene degradation SBML MML
mdo00630 Glyoxylate and dicarboxylate metabolism SBML MML
mdo00632 (Undocumented) SBML MML
mdo00640 Propanoate metabolism SBML MML
mdo00641 3-Chloroacrylic acid degradation SBML MML
mdo00643 Styrene degradation SBML MML
mdo00650 Butanoate metabolism SBML MML
mdo00660 C5-Branched dibasic acid metabolism SBML MML
mdo00670 One carbon pool by folate SBML MML
mdo00680 Methane metabolism SBML MML
mdo00710 (Undocumented) SBML MML
mdo00720 (Undocumented) SBML MML
mdo00730 Thiamine metabolism SBML MML
mdo00740 Riboflavin metabolism SBML MML
mdo00750 Vitamin B6 metabolism SBML MML
mdo00760 Nicotinate and nicotinamide metabolism SBML MML
mdo00770 Pantothenate and CoA biosynthesis SBML MML
mdo00780 Biotin metabolism SBML MML
mdo00785 Lipoic acid metabolism SBML MML
mdo00790 Folate biosynthesis SBML MML
mdo00791 Atrazine degradation SBML MML
mdo00830 Retinol metabolism SBML MML
mdo00860 Porphyrin and chlorophyll metabolism SBML MML
mdo00900 Terpenoid backbone biosynthesis SBML MML
mdo00903 (Undocumented) SBML MML
mdo00910 Nitrogen metabolism SBML MML
mdo00920 Sulfur metabolism SBML MML
mdo00930 Caprolactam degradation SBML MML
mdo00940 (Undocumented) SBML MML
mdo00950 (Undocumented) SBML MML
mdo00960 (Undocumented) SBML MML
mdo00970 Aminoacyl-tRNA biosynthesis SBML MML
mdo00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
mdo00982 (Undocumented) SBML MML
mdo00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.