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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism lwe: Listeria welshimeri SLCC5334

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
lwe00010 Glycolysis / Gluconeogenesis SBML MML
lwe00020 Citrate cycle (TCA cycle) SBML MML
lwe00030 Pentose phosphate pathway SBML MML
lwe00031 (Undocumented) SBML MML
lwe00040 Pentose and glucuronate interconversions SBML MML
lwe00051 Fructose and mannose metabolism SBML MML
lwe00052 Galactose metabolism SBML MML
lwe00061 Fatty acid biosynthesis SBML MML
lwe00071 Fatty acid metabolism SBML MML
lwe00072 Synthesis and degradation of ketone bodies SBML MML
lwe00100 (Undocumented) SBML MML
lwe00120 (Undocumented) SBML MML
lwe00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
lwe00220 (Undocumented) SBML MML
lwe00230 Purine metabolism SBML MML
lwe00240 Pyrimidine metabolism SBML MML
lwe00251 (Undocumented) SBML MML
lwe00252 (Undocumented) SBML MML
lwe00260 Glycine, serine and threonine metabolism SBML MML
lwe00271 (Undocumented) SBML MML
lwe00272 (Undocumented) SBML MML
lwe00280 Valine, leucine and isoleucine degradation SBML MML
lwe00281 Geraniol degradation SBML MML
lwe00290 Valine, leucine and isoleucine biosynthesis SBML MML
lwe00300 Lysine biosynthesis SBML MML
lwe00310 Lysine degradation SBML MML
lwe00330 Arginine and proline metabolism SBML MML
lwe00340 Histidine metabolism SBML MML
lwe00350 Tyrosine metabolism SBML MML
lwe00360 Phenylalanine metabolism SBML MML
lwe00361 gamma-Hexachlorocyclohexane degradation SBML MML
lwe00362 (Undocumented) SBML MML
lwe00363 Bisphenol A degradation SBML MML
lwe00380 Tryptophan metabolism SBML MML
lwe00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
lwe00401 Novobiocin biosynthesis SBML MML
lwe00410 beta-Alanine metabolism SBML MML
lwe00430 Taurine and hypotaurine metabolism SBML MML
lwe00440 Phosphonate and phosphinate metabolism SBML MML
lwe00450 Selenoamino acid metabolism SBML MML
lwe00460 (Undocumented) SBML MML
lwe00471 D-Glutamine and D-glutamate metabolism SBML MML
lwe00472 D-Arginine and D-ornithine metabolism SBML MML
lwe00473 D-Alanine metabolism SBML MML
lwe00480 Glutathione metabolism SBML MML
lwe00500 Starch and sucrose metabolism SBML MML
lwe00510 (Undocumented) SBML MML
lwe00520 Amino sugar and nucleotide sugar metabolism SBML MML
lwe00521 Streptomycin biosynthesis SBML MML
lwe00530 (Undocumented) SBML MML
lwe00550 Peptidoglycan biosynthesis SBML MML
lwe00561 Glycerolipid metabolism SBML MML
lwe00562 Inositol phosphate metabolism SBML MML
lwe00564 Glycerophospholipid metabolism SBML MML
lwe00590 Arachidonic acid metabolism SBML MML
lwe00620 Pyruvate metabolism SBML MML
lwe00624 1- and 2-Methylnaphthalene degradation SBML MML
lwe00626 Naphthalene and anthracene degradation SBML MML
lwe00630 Glyoxylate and dicarboxylate metabolism SBML MML
lwe00632 (Undocumented) SBML MML
lwe00640 Propanoate metabolism SBML MML
lwe00641 3-Chloroacrylic acid degradation SBML MML
lwe00643 Styrene degradation SBML MML
lwe00650 Butanoate metabolism SBML MML
lwe00660 C5-Branched dibasic acid metabolism SBML MML
lwe00670 One carbon pool by folate SBML MML
lwe00680 Methane metabolism SBML MML
lwe00710 (Undocumented) SBML MML
lwe00720 (Undocumented) SBML MML
lwe00730 Thiamine metabolism SBML MML
lwe00740 Riboflavin metabolism SBML MML
lwe00750 Vitamin B6 metabolism SBML MML
lwe00760 Nicotinate and nicotinamide metabolism SBML MML
lwe00770 Pantothenate and CoA biosynthesis SBML MML
lwe00780 Biotin metabolism SBML MML
lwe00785 Lipoic acid metabolism SBML MML
lwe00790 Folate biosynthesis SBML MML
lwe00860 Porphyrin and chlorophyll metabolism SBML MML
lwe00900 Terpenoid backbone biosynthesis SBML MML
lwe00903 (Undocumented) SBML MML
lwe00910 Nitrogen metabolism SBML MML
lwe00920 Sulfur metabolism SBML MML
lwe00930 Caprolactam degradation SBML MML
lwe00950 (Undocumented) SBML MML
lwe00960 (Undocumented) SBML MML
lwe00970 Aminoacyl-tRNA biosynthesis SBML MML
lwe00982 (Undocumented) SBML MML
lwe00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.