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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism lpn: Legionella pneumophila Philadelphia 1

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
lpn00010 Glycolysis / Gluconeogenesis SBML MML
lpn00020 Citrate cycle (TCA cycle) SBML MML
lpn00030 Pentose phosphate pathway SBML MML
lpn00031 (Undocumented) SBML MML
lpn00040 Pentose and glucuronate interconversions SBML MML
lpn00051 Fructose and mannose metabolism SBML MML
lpn00052 Galactose metabolism SBML MML
lpn00053 Ascorbate and aldarate metabolism SBML MML
lpn00061 Fatty acid biosynthesis SBML MML
lpn00062 Fatty acid elongation in mitochondria SBML MML
lpn00071 Fatty acid metabolism SBML MML
lpn00072 Synthesis and degradation of ketone bodies SBML MML
lpn00100 (Undocumented) SBML MML
lpn00120 (Undocumented) SBML MML
lpn00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
lpn00220 (Undocumented) SBML MML
lpn00230 Purine metabolism SBML MML
lpn00240 Pyrimidine metabolism SBML MML
lpn00251 (Undocumented) SBML MML
lpn00252 (Undocumented) SBML MML
lpn00260 Glycine, serine and threonine metabolism SBML MML
lpn00271 (Undocumented) SBML MML
lpn00272 (Undocumented) SBML MML
lpn00280 Valine, leucine and isoleucine degradation SBML MML
lpn00281 Geraniol degradation SBML MML
lpn00290 Valine, leucine and isoleucine biosynthesis SBML MML
lpn00300 Lysine biosynthesis SBML MML
lpn00310 Lysine degradation SBML MML
lpn00330 Arginine and proline metabolism SBML MML
lpn00340 Histidine metabolism SBML MML
lpn00350 Tyrosine metabolism SBML MML
lpn00360 Phenylalanine metabolism SBML MML
lpn00361 gamma-Hexachlorocyclohexane degradation SBML MML
lpn00362 (Undocumented) SBML MML
lpn00364 Fluorobenzoate degradation SBML MML
lpn00380 Tryptophan metabolism SBML MML
lpn00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
lpn00401 Novobiocin biosynthesis SBML MML
lpn00410 beta-Alanine metabolism SBML MML
lpn00430 Taurine and hypotaurine metabolism SBML MML
lpn00450 Selenoamino acid metabolism SBML MML
lpn00460 (Undocumented) SBML MML
lpn00471 D-Glutamine and D-glutamate metabolism SBML MML
lpn00472 D-Arginine and D-ornithine metabolism SBML MML
lpn00473 D-Alanine metabolism SBML MML
lpn00480 Glutathione metabolism SBML MML
lpn00500 Starch and sucrose metabolism SBML MML
lpn00520 Amino sugar and nucleotide sugar metabolism SBML MML
lpn00521 Streptomycin biosynthesis SBML MML
lpn00523 Polyketide sugar unit biosynthesis SBML MML
lpn00530 (Undocumented) SBML MML
lpn00540 Lipopolysaccharide biosynthesis SBML MML
lpn00550 Peptidoglycan biosynthesis SBML MML
lpn00561 Glycerolipid metabolism SBML MML
lpn00562 Inositol phosphate metabolism SBML MML
lpn00564 Glycerophospholipid metabolism SBML MML
lpn00592 alpha-Linolenic acid metabolism SBML MML
lpn00600 Sphingolipid metabolism SBML MML
lpn00620 Pyruvate metabolism SBML MML
lpn00622 Toluene and xylene degradation SBML MML
lpn00624 1- and 2-Methylnaphthalene degradation SBML MML
lpn00626 Naphthalene and anthracene degradation SBML MML
lpn00627 1,4-Dichlorobenzene degradation SBML MML
lpn00630 Glyoxylate and dicarboxylate metabolism SBML MML
lpn00632 (Undocumented) SBML MML
lpn00640 Propanoate metabolism SBML MML
lpn00641 3-Chloroacrylic acid degradation SBML MML
lpn00642 Ethylbenzene degradation SBML MML
lpn00643 Styrene degradation SBML MML
lpn00650 Butanoate metabolism SBML MML
lpn00670 One carbon pool by folate SBML MML
lpn00680 Methane metabolism SBML MML
lpn00710 (Undocumented) SBML MML
lpn00720 (Undocumented) SBML MML
lpn00730 Thiamine metabolism SBML MML
lpn00740 Riboflavin metabolism SBML MML
lpn00750 Vitamin B6 metabolism SBML MML
lpn00760 Nicotinate and nicotinamide metabolism SBML MML
lpn00770 Pantothenate and CoA biosynthesis SBML MML
lpn00780 Biotin metabolism SBML MML
lpn00785 Lipoic acid metabolism SBML MML
lpn00790 Folate biosynthesis SBML MML
lpn00860 Porphyrin and chlorophyll metabolism SBML MML
lpn00900 Terpenoid backbone biosynthesis SBML MML
lpn00903 (Undocumented) SBML MML
lpn00910 Nitrogen metabolism SBML MML
lpn00920 Sulfur metabolism SBML MML
lpn00930 Caprolactam degradation SBML MML
lpn00960 (Undocumented) SBML MML
lpn00970 Aminoacyl-tRNA biosynthesis SBML MML
lpn00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
lpn00982 (Undocumented) SBML MML
lpn00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.