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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism llm: Lactococcus lactis subsp. cremoris MG1363

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
llm00010 Glycolysis / Gluconeogenesis SBML MML
llm00020 Citrate cycle (TCA cycle) SBML MML
llm00030 Pentose phosphate pathway SBML MML
llm00040 Pentose and glucuronate interconversions SBML MML
llm00051 Fructose and mannose metabolism SBML MML
llm00052 Galactose metabolism SBML MML
llm00053 Ascorbate and aldarate metabolism SBML MML
llm00061 Fatty acid biosynthesis SBML MML
llm00071 Fatty acid metabolism SBML MML
llm00072 Synthesis and degradation of ketone bodies SBML MML
llm00100 (Undocumented) SBML MML
llm00120 (Undocumented) SBML MML
llm00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
llm00220 (Undocumented) SBML MML
llm00230 Purine metabolism SBML MML
llm00240 Pyrimidine metabolism SBML MML
llm00251 (Undocumented) SBML MML
llm00252 (Undocumented) SBML MML
llm00260 Glycine, serine and threonine metabolism SBML MML
llm00271 (Undocumented) SBML MML
llm00272 (Undocumented) SBML MML
llm00280 Valine, leucine and isoleucine degradation SBML MML
llm00290 Valine, leucine and isoleucine biosynthesis SBML MML
llm00300 Lysine biosynthesis SBML MML
llm00330 Arginine and proline metabolism SBML MML
llm00340 Histidine metabolism SBML MML
llm00350 Tyrosine metabolism SBML MML
llm00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
llm00360 Phenylalanine metabolism SBML MML
llm00361 gamma-Hexachlorocyclohexane degradation SBML MML
llm00362 (Undocumented) SBML MML
llm00363 Bisphenol A degradation SBML MML
llm00380 Tryptophan metabolism SBML MML
llm00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
llm00401 Novobiocin biosynthesis SBML MML
llm00430 Taurine and hypotaurine metabolism SBML MML
llm00440 Phosphonate and phosphinate metabolism SBML MML
llm00450 Selenoamino acid metabolism SBML MML
llm00460 (Undocumented) SBML MML
llm00471 D-Glutamine and D-glutamate metabolism SBML MML
llm00473 D-Alanine metabolism SBML MML
llm00480 Glutathione metabolism SBML MML
llm00500 Starch and sucrose metabolism SBML MML
llm00510 (Undocumented) SBML MML
llm00520 Amino sugar and nucleotide sugar metabolism SBML MML
llm00521 Streptomycin biosynthesis SBML MML
llm00523 Polyketide sugar unit biosynthesis SBML MML
llm00530 (Undocumented) SBML MML
llm00540 Lipopolysaccharide biosynthesis SBML MML
llm00550 Peptidoglycan biosynthesis SBML MML
llm00561 Glycerolipid metabolism SBML MML
llm00562 Inositol phosphate metabolism SBML MML
llm00564 Glycerophospholipid metabolism SBML MML
llm00590 Arachidonic acid metabolism SBML MML
llm00620 Pyruvate metabolism SBML MML
llm00624 1- and 2-Methylnaphthalene degradation SBML MML
llm00626 Naphthalene and anthracene degradation SBML MML
llm00628 Fluorene degradation SBML MML
llm00630 Glyoxylate and dicarboxylate metabolism SBML MML
llm00632 (Undocumented) SBML MML
llm00640 Propanoate metabolism SBML MML
llm00641 3-Chloroacrylic acid degradation SBML MML
llm00643 Styrene degradation SBML MML
llm00650 Butanoate metabolism SBML MML
llm00660 C5-Branched dibasic acid metabolism SBML MML
llm00670 One carbon pool by folate SBML MML
llm00680 Methane metabolism SBML MML
llm00710 (Undocumented) SBML MML
llm00720 (Undocumented) SBML MML
llm00730 Thiamine metabolism SBML MML
llm00740 Riboflavin metabolism SBML MML
llm00750 Vitamin B6 metabolism SBML MML
llm00760 Nicotinate and nicotinamide metabolism SBML MML
llm00770 Pantothenate and CoA biosynthesis SBML MML
llm00780 Biotin metabolism SBML MML
llm00785 Lipoic acid metabolism SBML MML
llm00790 Folate biosynthesis SBML MML
llm00860 Porphyrin and chlorophyll metabolism SBML MML
llm00900 Terpenoid backbone biosynthesis SBML MML
llm00903 (Undocumented) SBML MML
llm00910 Nitrogen metabolism SBML MML
llm00920 Sulfur metabolism SBML MML
llm00940 (Undocumented) SBML MML
llm00941 (Undocumented) SBML MML
llm00950 (Undocumented) SBML MML
llm00960 (Undocumented) SBML MML
llm00970 Aminoacyl-tRNA biosynthesis SBML MML
llm00982 (Undocumented) SBML MML
llm00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.