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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism lil: Leptospira interrogans serovar lai

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
lil00010 Glycolysis / Gluconeogenesis SBML MML
lil00020 Citrate cycle (TCA cycle) SBML MML
lil00030 Pentose phosphate pathway SBML MML
lil00040 Pentose and glucuronate interconversions SBML MML
lil00051 Fructose and mannose metabolism SBML MML
lil00052 Galactose metabolism SBML MML
lil00053 Ascorbate and aldarate metabolism SBML MML
lil00061 Fatty acid biosynthesis SBML MML
lil00062 Fatty acid elongation in mitochondria SBML MML
lil00071 Fatty acid metabolism SBML MML
lil00072 Synthesis and degradation of ketone bodies SBML MML
lil00100 (Undocumented) SBML MML
lil00120 (Undocumented) SBML MML
lil00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
lil00220 (Undocumented) SBML MML
lil00230 Purine metabolism SBML MML
lil00240 Pyrimidine metabolism SBML MML
lil00251 (Undocumented) SBML MML
lil00252 (Undocumented) SBML MML
lil00260 Glycine, serine and threonine metabolism SBML MML
lil00271 (Undocumented) SBML MML
lil00272 (Undocumented) SBML MML
lil00280 Valine, leucine and isoleucine degradation SBML MML
lil00281 Geraniol degradation SBML MML
lil00290 Valine, leucine and isoleucine biosynthesis SBML MML
lil00300 Lysine biosynthesis SBML MML
lil00310 Lysine degradation SBML MML
lil00311 Penicillin and cephalosporin biosynthesis SBML MML
lil00330 Arginine and proline metabolism SBML MML
lil00340 Histidine metabolism SBML MML
lil00350 Tyrosine metabolism SBML MML
lil00360 Phenylalanine metabolism SBML MML
lil00361 gamma-Hexachlorocyclohexane degradation SBML MML
lil00380 Tryptophan metabolism SBML MML
lil00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
lil00401 Novobiocin biosynthesis SBML MML
lil00410 beta-Alanine metabolism SBML MML
lil00450 Selenoamino acid metabolism SBML MML
lil00460 (Undocumented) SBML MML
lil00471 D-Glutamine and D-glutamate metabolism SBML MML
lil00473 D-Alanine metabolism SBML MML
lil00480 Glutathione metabolism SBML MML
lil00500 Starch and sucrose metabolism SBML MML
lil00520 Amino sugar and nucleotide sugar metabolism SBML MML
lil00521 Streptomycin biosynthesis SBML MML
lil00523 Polyketide sugar unit biosynthesis SBML MML
lil00530 (Undocumented) SBML MML
lil00540 Lipopolysaccharide biosynthesis SBML MML
lil00550 Peptidoglycan biosynthesis SBML MML
lil00561 Glycerolipid metabolism SBML MML
lil00562 Inositol phosphate metabolism SBML MML
lil00564 Glycerophospholipid metabolism SBML MML
lil00590 Arachidonic acid metabolism SBML MML
lil00592 alpha-Linolenic acid metabolism SBML MML
lil00600 Sphingolipid metabolism SBML MML
lil00620 Pyruvate metabolism SBML MML
lil00624 1- and 2-Methylnaphthalene degradation SBML MML
lil00630 Glyoxylate and dicarboxylate metabolism SBML MML
lil00631 1,2-Dichloroethane degradation SBML MML
lil00632 (Undocumented) SBML MML
lil00640 Propanoate metabolism SBML MML
lil00641 3-Chloroacrylic acid degradation SBML MML
lil00643 Styrene degradation SBML MML
lil00650 Butanoate metabolism SBML MML
lil00660 C5-Branched dibasic acid metabolism SBML MML
lil00670 One carbon pool by folate SBML MML
lil00680 Methane metabolism SBML MML
lil00710 (Undocumented) SBML MML
lil00720 (Undocumented) SBML MML
lil00730 Thiamine metabolism SBML MML
lil00740 Riboflavin metabolism SBML MML
lil00750 Vitamin B6 metabolism SBML MML
lil00760 Nicotinate and nicotinamide metabolism SBML MML
lil00770 Pantothenate and CoA biosynthesis SBML MML
lil00780 Biotin metabolism SBML MML
lil00785 Lipoic acid metabolism SBML MML
lil00790 Folate biosynthesis SBML MML
lil00860 Porphyrin and chlorophyll metabolism SBML MML
lil00900 Terpenoid backbone biosynthesis SBML MML
lil00903 (Undocumented) SBML MML
lil00910 Nitrogen metabolism SBML MML
lil00920 Sulfur metabolism SBML MML
lil00930 Caprolactam degradation SBML MML
lil00950 (Undocumented) SBML MML
lil00970 Aminoacyl-tRNA biosynthesis SBML MML
lil00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
lil00982 (Undocumented) SBML MML
lil00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.