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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ldb: Lactobacillus delbrueckii ATCC 11842

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ldb00010 Glycolysis / Gluconeogenesis SBML MML
ldb00020 Citrate cycle (TCA cycle) SBML MML
ldb00030 Pentose phosphate pathway SBML MML
ldb00040 Pentose and glucuronate interconversions SBML MML
ldb00051 Fructose and mannose metabolism SBML MML
ldb00052 Galactose metabolism SBML MML
ldb00061 Fatty acid biosynthesis SBML MML
ldb00071 Fatty acid metabolism SBML MML
ldb00072 Synthesis and degradation of ketone bodies SBML MML
ldb00100 (Undocumented) SBML MML
ldb00120 (Undocumented) SBML MML
ldb00220 (Undocumented) SBML MML
ldb00230 Purine metabolism SBML MML
ldb00240 Pyrimidine metabolism SBML MML
ldb00251 (Undocumented) SBML MML
ldb00252 (Undocumented) SBML MML
ldb00260 Glycine, serine and threonine metabolism SBML MML
ldb00271 (Undocumented) SBML MML
ldb00272 (Undocumented) SBML MML
ldb00280 Valine, leucine and isoleucine degradation SBML MML
ldb00290 Valine, leucine and isoleucine biosynthesis SBML MML
ldb00300 Lysine biosynthesis SBML MML
ldb00310 Lysine degradation SBML MML
ldb00330 Arginine and proline metabolism SBML MML
ldb00340 Histidine metabolism SBML MML
ldb00350 Tyrosine metabolism SBML MML
ldb00380 Tryptophan metabolism SBML MML
ldb00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ldb00430 Taurine and hypotaurine metabolism SBML MML
ldb00440 Phosphonate and phosphinate metabolism SBML MML
ldb00450 Selenoamino acid metabolism SBML MML
ldb00460 (Undocumented) SBML MML
ldb00471 D-Glutamine and D-glutamate metabolism SBML MML
ldb00473 D-Alanine metabolism SBML MML
ldb00480 Glutathione metabolism SBML MML
ldb00500 Starch and sucrose metabolism SBML MML
ldb00520 Amino sugar and nucleotide sugar metabolism SBML MML
ldb00521 Streptomycin biosynthesis SBML MML
ldb00523 Polyketide sugar unit biosynthesis SBML MML
ldb00530 (Undocumented) SBML MML
ldb00550 Peptidoglycan biosynthesis SBML MML
ldb00561 Glycerolipid metabolism SBML MML
ldb00564 Glycerophospholipid metabolism SBML MML
ldb00620 Pyruvate metabolism SBML MML
ldb00630 Glyoxylate and dicarboxylate metabolism SBML MML
ldb00632 (Undocumented) SBML MML
ldb00640 Propanoate metabolism SBML MML
ldb00650 Butanoate metabolism SBML MML
ldb00670 One carbon pool by folate SBML MML
ldb00710 (Undocumented) SBML MML
ldb00720 (Undocumented) SBML MML
ldb00730 Thiamine metabolism SBML MML
ldb00740 Riboflavin metabolism SBML MML
ldb00760 Nicotinate and nicotinamide metabolism SBML MML
ldb00770 Pantothenate and CoA biosynthesis SBML MML
ldb00780 Biotin metabolism SBML MML
ldb00790 Folate biosynthesis SBML MML
ldb00900 Terpenoid backbone biosynthesis SBML MML
ldb00910 Nitrogen metabolism SBML MML
ldb00920 Sulfur metabolism SBML MML
ldb00970 Aminoacyl-tRNA biosynthesis SBML MML
ldb00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.