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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism lbl: Leptospira borgpetersenii L550

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
lbl00010 Glycolysis / Gluconeogenesis SBML MML
lbl00020 Citrate cycle (TCA cycle) SBML MML
lbl00030 Pentose phosphate pathway SBML MML
lbl00040 Pentose and glucuronate interconversions SBML MML
lbl00051 Fructose and mannose metabolism SBML MML
lbl00052 Galactose metabolism SBML MML
lbl00053 Ascorbate and aldarate metabolism SBML MML
lbl00061 Fatty acid biosynthesis SBML MML
lbl00062 Fatty acid elongation in mitochondria SBML MML
lbl00071 Fatty acid metabolism SBML MML
lbl00072 Synthesis and degradation of ketone bodies SBML MML
lbl00100 (Undocumented) SBML MML
lbl00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
lbl00220 (Undocumented) SBML MML
lbl00230 Purine metabolism SBML MML
lbl00240 Pyrimidine metabolism SBML MML
lbl00251 (Undocumented) SBML MML
lbl00252 (Undocumented) SBML MML
lbl00260 Glycine, serine and threonine metabolism SBML MML
lbl00271 (Undocumented) SBML MML
lbl00272 (Undocumented) SBML MML
lbl00280 Valine, leucine and isoleucine degradation SBML MML
lbl00290 Valine, leucine and isoleucine biosynthesis SBML MML
lbl00300 Lysine biosynthesis SBML MML
lbl00310 Lysine degradation SBML MML
lbl00330 Arginine and proline metabolism SBML MML
lbl00340 Histidine metabolism SBML MML
lbl00350 Tyrosine metabolism SBML MML
lbl00360 Phenylalanine metabolism SBML MML
lbl00380 Tryptophan metabolism SBML MML
lbl00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
lbl00401 Novobiocin biosynthesis SBML MML
lbl00410 beta-Alanine metabolism SBML MML
lbl00450 Selenoamino acid metabolism SBML MML
lbl00460 (Undocumented) SBML MML
lbl00471 D-Glutamine and D-glutamate metabolism SBML MML
lbl00473 D-Alanine metabolism SBML MML
lbl00480 Glutathione metabolism SBML MML
lbl00500 Starch and sucrose metabolism SBML MML
lbl00520 Amino sugar and nucleotide sugar metabolism SBML MML
lbl00521 Streptomycin biosynthesis SBML MML
lbl00523 Polyketide sugar unit biosynthesis SBML MML
lbl00530 (Undocumented) SBML MML
lbl00540 Lipopolysaccharide biosynthesis SBML MML
lbl00550 Peptidoglycan biosynthesis SBML MML
lbl00561 Glycerolipid metabolism SBML MML
lbl00562 Inositol phosphate metabolism SBML MML
lbl00564 Glycerophospholipid metabolism SBML MML
lbl00590 Arachidonic acid metabolism SBML MML
lbl00600 Sphingolipid metabolism SBML MML
lbl00620 Pyruvate metabolism SBML MML
lbl00630 Glyoxylate and dicarboxylate metabolism SBML MML
lbl00631 1,2-Dichloroethane degradation SBML MML
lbl00632 (Undocumented) SBML MML
lbl00640 Propanoate metabolism SBML MML
lbl00641 3-Chloroacrylic acid degradation SBML MML
lbl00650 Butanoate metabolism SBML MML
lbl00660 C5-Branched dibasic acid metabolism SBML MML
lbl00670 One carbon pool by folate SBML MML
lbl00680 Methane metabolism SBML MML
lbl00710 (Undocumented) SBML MML
lbl00720 (Undocumented) SBML MML
lbl00730 Thiamine metabolism SBML MML
lbl00740 Riboflavin metabolism SBML MML
lbl00750 Vitamin B6 metabolism SBML MML
lbl00760 Nicotinate and nicotinamide metabolism SBML MML
lbl00770 Pantothenate and CoA biosynthesis SBML MML
lbl00780 Biotin metabolism SBML MML
lbl00785 Lipoic acid metabolism SBML MML
lbl00790 Folate biosynthesis SBML MML
lbl00860 Porphyrin and chlorophyll metabolism SBML MML
lbl00900 Terpenoid backbone biosynthesis SBML MML
lbl00906 Carotenoid biosynthesis SBML MML
lbl00910 Nitrogen metabolism SBML MML
lbl00920 Sulfur metabolism SBML MML
lbl00930 Caprolactam degradation SBML MML
lbl00970 Aminoacyl-tRNA biosynthesis SBML MML
lbl00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.