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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism kpn: Klebsiella pneumoniae

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
kpn00010 Glycolysis / Gluconeogenesis SBML MML
kpn00020 Citrate cycle (TCA cycle) SBML MML
kpn00030 Pentose phosphate pathway SBML MML
kpn00031 (Undocumented) SBML MML
kpn00040 Pentose and glucuronate interconversions SBML MML
kpn00051 Fructose and mannose metabolism SBML MML
kpn00052 Galactose metabolism SBML MML
kpn00053 Ascorbate and aldarate metabolism SBML MML
kpn00061 Fatty acid biosynthesis SBML MML
kpn00062 Fatty acid elongation in mitochondria SBML MML
kpn00071 Fatty acid metabolism SBML MML
kpn00072 Synthesis and degradation of ketone bodies SBML MML
kpn00100 (Undocumented) SBML MML
kpn00120 (Undocumented) SBML MML
kpn00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
kpn00150 Androgen and estrogen metabolism SBML MML
kpn00220 (Undocumented) SBML MML
kpn00230 Purine metabolism SBML MML
kpn00240 Pyrimidine metabolism SBML MML
kpn00251 (Undocumented) SBML MML
kpn00252 (Undocumented) SBML MML
kpn00260 Glycine, serine and threonine metabolism SBML MML
kpn00271 (Undocumented) SBML MML
kpn00272 (Undocumented) SBML MML
kpn00280 Valine, leucine and isoleucine degradation SBML MML
kpn00281 Geraniol degradation SBML MML
kpn00290 Valine, leucine and isoleucine biosynthesis SBML MML
kpn00300 Lysine biosynthesis SBML MML
kpn00310 Lysine degradation SBML MML
kpn00330 Arginine and proline metabolism SBML MML
kpn00340 Histidine metabolism SBML MML
kpn00350 Tyrosine metabolism SBML MML
kpn00360 Phenylalanine metabolism SBML MML
kpn00361 gamma-Hexachlorocyclohexane degradation SBML MML
kpn00362 (Undocumented) SBML MML
kpn00363 Bisphenol A degradation SBML MML
kpn00364 Fluorobenzoate degradation SBML MML
kpn00380 Tryptophan metabolism SBML MML
kpn00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
kpn00401 Novobiocin biosynthesis SBML MML
kpn00410 beta-Alanine metabolism SBML MML
kpn00430 Taurine and hypotaurine metabolism SBML MML
kpn00440 Phosphonate and phosphinate metabolism SBML MML
kpn00450 Selenoamino acid metabolism SBML MML
kpn00460 (Undocumented) SBML MML
kpn00471 D-Glutamine and D-glutamate metabolism SBML MML
kpn00473 D-Alanine metabolism SBML MML
kpn00480 Glutathione metabolism SBML MML
kpn00500 Starch and sucrose metabolism SBML MML
kpn00510 (Undocumented) SBML MML
kpn00520 Amino sugar and nucleotide sugar metabolism SBML MML
kpn00521 Streptomycin biosynthesis SBML MML
kpn00523 Polyketide sugar unit biosynthesis SBML MML
kpn00530 (Undocumented) SBML MML
kpn00540 Lipopolysaccharide biosynthesis SBML MML
kpn00550 Peptidoglycan biosynthesis SBML MML
kpn00561 Glycerolipid metabolism SBML MML
kpn00562 Inositol phosphate metabolism SBML MML
kpn00564 Glycerophospholipid metabolism SBML MML
kpn00590 Arachidonic acid metabolism SBML MML
kpn00592 alpha-Linolenic acid metabolism SBML MML
kpn00600 Sphingolipid metabolism SBML MML
kpn00620 Pyruvate metabolism SBML MML
kpn00621 (Undocumented) SBML MML
kpn00622 Toluene and xylene degradation SBML MML
kpn00623 2,4-Dichlorobenzoate degradation SBML MML
kpn00624 1- and 2-Methylnaphthalene degradation SBML MML
kpn00626 Naphthalene and anthracene degradation SBML MML
kpn00627 1,4-Dichlorobenzene degradation SBML MML
kpn00628 Fluorene degradation SBML MML
kpn00629 Carbazole degradation SBML MML
kpn00630 Glyoxylate and dicarboxylate metabolism SBML MML
kpn00632 (Undocumented) SBML MML
kpn00633 Trinitrotoluene degradation SBML MML
kpn00640 Propanoate metabolism SBML MML
kpn00641 3-Chloroacrylic acid degradation SBML MML
kpn00642 Ethylbenzene degradation SBML MML
kpn00643 Styrene degradation SBML MML
kpn00650 Butanoate metabolism SBML MML
kpn00660 C5-Branched dibasic acid metabolism SBML MML
kpn00670 One carbon pool by folate SBML MML
kpn00680 Methane metabolism SBML MML
kpn00710 (Undocumented) SBML MML
kpn00720 (Undocumented) SBML MML
kpn00730 Thiamine metabolism SBML MML
kpn00740 Riboflavin metabolism SBML MML
kpn00750 Vitamin B6 metabolism SBML MML
kpn00760 Nicotinate and nicotinamide metabolism SBML MML
kpn00770 Pantothenate and CoA biosynthesis SBML MML
kpn00780 Biotin metabolism SBML MML
kpn00785 Lipoic acid metabolism SBML MML
kpn00790 Folate biosynthesis SBML MML
kpn00791 Atrazine degradation SBML MML
kpn00860 Porphyrin and chlorophyll metabolism SBML MML
kpn00900 Terpenoid backbone biosynthesis SBML MML
kpn00903 (Undocumented) SBML MML
kpn00910 Nitrogen metabolism SBML MML
kpn00920 Sulfur metabolism SBML MML
kpn00930 Caprolactam degradation SBML MML
kpn00940 (Undocumented) SBML MML
kpn00950 (Undocumented) SBML MML
kpn00960 (Undocumented) SBML MML
kpn00970 Aminoacyl-tRNA biosynthesis SBML MML
kpn00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
kpn00982 (Undocumented) SBML MML
kpn00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.