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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ilo: Idiomarina loihiensis

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ilo00010 Glycolysis / Gluconeogenesis SBML MML
ilo00020 Citrate cycle (TCA cycle) SBML MML
ilo00030 Pentose phosphate pathway SBML MML
ilo00031 (Undocumented) SBML MML
ilo00040 Pentose and glucuronate interconversions SBML MML
ilo00051 Fructose and mannose metabolism SBML MML
ilo00052 Galactose metabolism SBML MML
ilo00053 Ascorbate and aldarate metabolism SBML MML
ilo00061 Fatty acid biosynthesis SBML MML
ilo00062 Fatty acid elongation in mitochondria SBML MML
ilo00071 Fatty acid metabolism SBML MML
ilo00072 Synthesis and degradation of ketone bodies SBML MML
ilo00100 (Undocumented) SBML MML
ilo00120 (Undocumented) SBML MML
ilo00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ilo00220 (Undocumented) SBML MML
ilo00230 Purine metabolism SBML MML
ilo00240 Pyrimidine metabolism SBML MML
ilo00251 (Undocumented) SBML MML
ilo00252 (Undocumented) SBML MML
ilo00260 Glycine, serine and threonine metabolism SBML MML
ilo00271 (Undocumented) SBML MML
ilo00272 (Undocumented) SBML MML
ilo00280 Valine, leucine and isoleucine degradation SBML MML
ilo00281 Geraniol degradation SBML MML
ilo00290 Valine, leucine and isoleucine biosynthesis SBML MML
ilo00300 Lysine biosynthesis SBML MML
ilo00310 Lysine degradation SBML MML
ilo00330 Arginine and proline metabolism SBML MML
ilo00340 Histidine metabolism SBML MML
ilo00350 Tyrosine metabolism SBML MML
ilo00360 Phenylalanine metabolism SBML MML
ilo00361 gamma-Hexachlorocyclohexane degradation SBML MML
ilo00362 (Undocumented) SBML MML
ilo00363 Bisphenol A degradation SBML MML
ilo00380 Tryptophan metabolism SBML MML
ilo00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ilo00401 Novobiocin biosynthesis SBML MML
ilo00410 beta-Alanine metabolism SBML MML
ilo00430 Taurine and hypotaurine metabolism SBML MML
ilo00450 Selenoamino acid metabolism SBML MML
ilo00460 (Undocumented) SBML MML
ilo00471 D-Glutamine and D-glutamate metabolism SBML MML
ilo00473 D-Alanine metabolism SBML MML
ilo00480 Glutathione metabolism SBML MML
ilo00500 Starch and sucrose metabolism SBML MML
ilo00520 Amino sugar and nucleotide sugar metabolism SBML MML
ilo00521 Streptomycin biosynthesis SBML MML
ilo00523 Polyketide sugar unit biosynthesis SBML MML
ilo00530 (Undocumented) SBML MML
ilo00540 Lipopolysaccharide biosynthesis SBML MML
ilo00550 Peptidoglycan biosynthesis SBML MML
ilo00561 Glycerolipid metabolism SBML MML
ilo00562 Inositol phosphate metabolism SBML MML
ilo00564 Glycerophospholipid metabolism SBML MML
ilo00565 Ether lipid metabolism SBML MML
ilo00592 alpha-Linolenic acid metabolism SBML MML
ilo00620 Pyruvate metabolism SBML MML
ilo00624 1- and 2-Methylnaphthalene degradation SBML MML
ilo00626 Naphthalene and anthracene degradation SBML MML
ilo00630 Glyoxylate and dicarboxylate metabolism SBML MML
ilo00631 1,2-Dichloroethane degradation SBML MML
ilo00632 (Undocumented) SBML MML
ilo00640 Propanoate metabolism SBML MML
ilo00641 3-Chloroacrylic acid degradation SBML MML
ilo00642 Ethylbenzene degradation SBML MML
ilo00650 Butanoate metabolism SBML MML
ilo00660 C5-Branched dibasic acid metabolism SBML MML
ilo00670 One carbon pool by folate SBML MML
ilo00680 Methane metabolism SBML MML
ilo00710 (Undocumented) SBML MML
ilo00720 (Undocumented) SBML MML
ilo00730 Thiamine metabolism SBML MML
ilo00740 Riboflavin metabolism SBML MML
ilo00750 Vitamin B6 metabolism SBML MML
ilo00760 Nicotinate and nicotinamide metabolism SBML MML
ilo00770 Pantothenate and CoA biosynthesis SBML MML
ilo00780 Biotin metabolism SBML MML
ilo00785 Lipoic acid metabolism SBML MML
ilo00790 Folate biosynthesis SBML MML
ilo00860 Porphyrin and chlorophyll metabolism SBML MML
ilo00900 Terpenoid backbone biosynthesis SBML MML
ilo00903 (Undocumented) SBML MML
ilo00910 Nitrogen metabolism SBML MML
ilo00920 Sulfur metabolism SBML MML
ilo00930 Caprolactam degradation SBML MML
ilo00940 (Undocumented) SBML MML
ilo00950 (Undocumented) SBML MML
ilo00960 (Undocumented) SBML MML
ilo00970 Aminoacyl-tRNA biosynthesis SBML MML
ilo00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
ilo00982 (Undocumented) SBML MML
ilo00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.