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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism iho: Ignicoccus hospitalis

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
iho00010 Glycolysis / Gluconeogenesis SBML MML
iho00020 Citrate cycle (TCA cycle) SBML MML
iho00030 Pentose phosphate pathway SBML MML
iho00040 Pentose and glucuronate interconversions SBML MML
iho00051 Fructose and mannose metabolism SBML MML
iho00052 Galactose metabolism SBML MML
iho00061 Fatty acid biosynthesis SBML MML
iho00062 Fatty acid elongation in mitochondria SBML MML
iho00071 Fatty acid metabolism SBML MML
iho00100 (Undocumented) SBML MML
iho00120 (Undocumented) SBML MML
iho00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
iho00220 (Undocumented) SBML MML
iho00230 Purine metabolism SBML MML
iho00240 Pyrimidine metabolism SBML MML
iho00251 (Undocumented) SBML MML
iho00252 (Undocumented) SBML MML
iho00260 Glycine, serine and threonine metabolism SBML MML
iho00271 (Undocumented) SBML MML
iho00272 (Undocumented) SBML MML
iho00280 Valine, leucine and isoleucine degradation SBML MML
iho00281 Geraniol degradation SBML MML
iho00290 Valine, leucine and isoleucine biosynthesis SBML MML
iho00300 Lysine biosynthesis SBML MML
iho00310 Lysine degradation SBML MML
iho00330 Arginine and proline metabolism SBML MML
iho00340 Histidine metabolism SBML MML
iho00350 Tyrosine metabolism SBML MML
iho00360 Phenylalanine metabolism SBML MML
iho00380 Tryptophan metabolism SBML MML
iho00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
iho00401 Novobiocin biosynthesis SBML MML
iho00450 Selenoamino acid metabolism SBML MML
iho00500 Starch and sucrose metabolism SBML MML
iho00510 (Undocumented) SBML MML
iho00520 Amino sugar and nucleotide sugar metabolism SBML MML
iho00521 Streptomycin biosynthesis SBML MML
iho00530 (Undocumented) SBML MML
iho00550 Peptidoglycan biosynthesis SBML MML
iho00562 Inositol phosphate metabolism SBML MML
iho00564 Glycerophospholipid metabolism SBML MML
iho00592 alpha-Linolenic acid metabolism SBML MML
iho00620 Pyruvate metabolism SBML MML
iho00624 1- and 2-Methylnaphthalene degradation SBML MML
iho00630 Glyoxylate and dicarboxylate metabolism SBML MML
iho00632 (Undocumented) SBML MML
iho00640 Propanoate metabolism SBML MML
iho00641 3-Chloroacrylic acid degradation SBML MML
iho00650 Butanoate metabolism SBML MML
iho00660 C5-Branched dibasic acid metabolism SBML MML
iho00670 One carbon pool by folate SBML MML
iho00680 Methane metabolism SBML MML
iho00710 (Undocumented) SBML MML
iho00720 (Undocumented) SBML MML
iho00730 Thiamine metabolism SBML MML
iho00740 Riboflavin metabolism SBML MML
iho00750 Vitamin B6 metabolism SBML MML
iho00760 Nicotinate and nicotinamide metabolism SBML MML
iho00770 Pantothenate and CoA biosynthesis SBML MML
iho00790 Folate biosynthesis SBML MML
iho00860 Porphyrin and chlorophyll metabolism SBML MML
iho00900 Terpenoid backbone biosynthesis SBML MML
iho00910 Nitrogen metabolism SBML MML
iho00920 Sulfur metabolism SBML MML
iho00970 Aminoacyl-tRNA biosynthesis SBML MML
iho00982 (Undocumented) SBML MML
iho00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.