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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism hit: Haemophilus influenzae 86-028NP (nontypeable)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
hit00010 Glycolysis / Gluconeogenesis SBML MML
hit00020 Citrate cycle (TCA cycle) SBML MML
hit00030 Pentose phosphate pathway SBML MML
hit00040 Pentose and glucuronate interconversions SBML MML
hit00051 Fructose and mannose metabolism SBML MML
hit00052 Galactose metabolism SBML MML
hit00061 Fatty acid biosynthesis SBML MML
hit00071 Fatty acid metabolism SBML MML
hit00100 (Undocumented) SBML MML
hit00120 (Undocumented) SBML MML
hit00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
hit00220 (Undocumented) SBML MML
hit00230 Purine metabolism SBML MML
hit00240 Pyrimidine metabolism SBML MML
hit00251 (Undocumented) SBML MML
hit00252 (Undocumented) SBML MML
hit00260 Glycine, serine and threonine metabolism SBML MML
hit00271 (Undocumented) SBML MML
hit00272 (Undocumented) SBML MML
hit00280 Valine, leucine and isoleucine degradation SBML MML
hit00290 Valine, leucine and isoleucine biosynthesis SBML MML
hit00300 Lysine biosynthesis SBML MML
hit00310 Lysine degradation SBML MML
hit00330 Arginine and proline metabolism SBML MML
hit00340 Histidine metabolism SBML MML
hit00350 Tyrosine metabolism SBML MML
hit00360 Phenylalanine metabolism SBML MML
hit00380 Tryptophan metabolism SBML MML
hit00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
hit00401 Novobiocin biosynthesis SBML MML
hit00430 Taurine and hypotaurine metabolism SBML MML
hit00450 Selenoamino acid metabolism SBML MML
hit00460 (Undocumented) SBML MML
hit00471 D-Glutamine and D-glutamate metabolism SBML MML
hit00473 D-Alanine metabolism SBML MML
hit00480 Glutathione metabolism SBML MML
hit00500 Starch and sucrose metabolism SBML MML
hit00520 Amino sugar and nucleotide sugar metabolism SBML MML
hit00521 Streptomycin biosynthesis SBML MML
hit00530 (Undocumented) SBML MML
hit00540 Lipopolysaccharide biosynthesis SBML MML
hit00550 Peptidoglycan biosynthesis SBML MML
hit00561 Glycerolipid metabolism SBML MML
hit00562 Inositol phosphate metabolism SBML MML
hit00564 Glycerophospholipid metabolism SBML MML
hit00620 Pyruvate metabolism SBML MML
hit00630 Glyoxylate and dicarboxylate metabolism SBML MML
hit00632 (Undocumented) SBML MML
hit00640 Propanoate metabolism SBML MML
hit00650 Butanoate metabolism SBML MML
hit00660 C5-Branched dibasic acid metabolism SBML MML
hit00670 One carbon pool by folate SBML MML
hit00680 Methane metabolism SBML MML
hit00710 (Undocumented) SBML MML
hit00720 (Undocumented) SBML MML
hit00730 Thiamine metabolism SBML MML
hit00740 Riboflavin metabolism SBML MML
hit00750 Vitamin B6 metabolism SBML MML
hit00760 Nicotinate and nicotinamide metabolism SBML MML
hit00770 Pantothenate and CoA biosynthesis SBML MML
hit00780 Biotin metabolism SBML MML
hit00785 Lipoic acid metabolism SBML MML
hit00790 Folate biosynthesis SBML MML
hit00860 Porphyrin and chlorophyll metabolism SBML MML
hit00900 Terpenoid backbone biosynthesis SBML MML
hit00910 Nitrogen metabolism SBML MML
hit00920 Sulfur metabolism SBML MML
hit00940 (Undocumented) SBML MML
hit00950 (Undocumented) SBML MML
hit00970 Aminoacyl-tRNA biosynthesis SBML MML
hit00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
hit00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.