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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism fph: Francisella philomiragia

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
fph00010 Glycolysis / Gluconeogenesis SBML MML
fph00020 Citrate cycle (TCA cycle) SBML MML
fph00030 Pentose phosphate pathway SBML MML
fph00040 Pentose and glucuronate interconversions SBML MML
fph00051 Fructose and mannose metabolism SBML MML
fph00052 Galactose metabolism SBML MML
fph00061 Fatty acid biosynthesis SBML MML
fph00062 Fatty acid elongation in mitochondria SBML MML
fph00071 Fatty acid metabolism SBML MML
fph00072 Synthesis and degradation of ketone bodies SBML MML
fph00100 (Undocumented) SBML MML
fph00120 (Undocumented) SBML MML
fph00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
fph00150 Androgen and estrogen metabolism SBML MML
fph00220 (Undocumented) SBML MML
fph00230 Purine metabolism SBML MML
fph00240 Pyrimidine metabolism SBML MML
fph00251 (Undocumented) SBML MML
fph00252 (Undocumented) SBML MML
fph00260 Glycine, serine and threonine metabolism SBML MML
fph00271 (Undocumented) SBML MML
fph00272 (Undocumented) SBML MML
fph00280 Valine, leucine and isoleucine degradation SBML MML
fph00281 Geraniol degradation SBML MML
fph00290 Valine, leucine and isoleucine biosynthesis SBML MML
fph00300 Lysine biosynthesis SBML MML
fph00310 Lysine degradation SBML MML
fph00311 Penicillin and cephalosporin biosynthesis SBML MML
fph00330 Arginine and proline metabolism SBML MML
fph00340 Histidine metabolism SBML MML
fph00350 Tyrosine metabolism SBML MML
fph00360 Phenylalanine metabolism SBML MML
fph00361 gamma-Hexachlorocyclohexane degradation SBML MML
fph00362 (Undocumented) SBML MML
fph00380 Tryptophan metabolism SBML MML
fph00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
fph00401 Novobiocin biosynthesis SBML MML
fph00410 beta-Alanine metabolism SBML MML
fph00430 Taurine and hypotaurine metabolism SBML MML
fph00450 Selenoamino acid metabolism SBML MML
fph00460 (Undocumented) SBML MML
fph00471 D-Glutamine and D-glutamate metabolism SBML MML
fph00473 D-Alanine metabolism SBML MML
fph00480 Glutathione metabolism SBML MML
fph00500 Starch and sucrose metabolism SBML MML
fph00520 Amino sugar and nucleotide sugar metabolism SBML MML
fph00521 Streptomycin biosynthesis SBML MML
fph00523 Polyketide sugar unit biosynthesis SBML MML
fph00530 (Undocumented) SBML MML
fph00540 Lipopolysaccharide biosynthesis SBML MML
fph00550 Peptidoglycan biosynthesis SBML MML
fph00561 Glycerolipid metabolism SBML MML
fph00562 Inositol phosphate metabolism SBML MML
fph00564 Glycerophospholipid metabolism SBML MML
fph00590 Arachidonic acid metabolism SBML MML
fph00592 alpha-Linolenic acid metabolism SBML MML
fph00620 Pyruvate metabolism SBML MML
fph00623 2,4-Dichlorobenzoate degradation SBML MML
fph00624 1- and 2-Methylnaphthalene degradation SBML MML
fph00626 Naphthalene and anthracene degradation SBML MML
fph00630 Glyoxylate and dicarboxylate metabolism SBML MML
fph00632 (Undocumented) SBML MML
fph00633 Trinitrotoluene degradation SBML MML
fph00640 Propanoate metabolism SBML MML
fph00641 3-Chloroacrylic acid degradation SBML MML
fph00642 Ethylbenzene degradation SBML MML
fph00650 Butanoate metabolism SBML MML
fph00660 C5-Branched dibasic acid metabolism SBML MML
fph00670 One carbon pool by folate SBML MML
fph00680 Methane metabolism SBML MML
fph00710 (Undocumented) SBML MML
fph00720 (Undocumented) SBML MML
fph00730 Thiamine metabolism SBML MML
fph00740 Riboflavin metabolism SBML MML
fph00750 Vitamin B6 metabolism SBML MML
fph00760 Nicotinate and nicotinamide metabolism SBML MML
fph00770 Pantothenate and CoA biosynthesis SBML MML
fph00780 Biotin metabolism SBML MML
fph00790 Folate biosynthesis SBML MML
fph00791 Atrazine degradation SBML MML
fph00860 Porphyrin and chlorophyll metabolism SBML MML
fph00900 Terpenoid backbone biosynthesis SBML MML
fph00903 (Undocumented) SBML MML
fph00910 Nitrogen metabolism SBML MML
fph00920 Sulfur metabolism SBML MML
fph00940 (Undocumented) SBML MML
fph00950 (Undocumented) SBML MML
fph00960 (Undocumented) SBML MML
fph00970 Aminoacyl-tRNA biosynthesis SBML MML
fph00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.